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(-) Description

Title :  CRYSTAL STRUCTURE OF THE CUE DOMAIN OF THE E3 UBIQUITIN LIGASE AMFR (GP78)
 
Authors :  G. Kozlov, K. Lepage, K. Gehring
Date :  15 Jul 12  (Deposition) - 25 Jul 12  (Release) - 25 Jul 12  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.60
Chains :  Asym./Biol. Unit :  A
Keywords :  All-Helical Structure, Ligase, Bag6 (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  G. Kozlov, K. Lepage, K. Gehring
Crystal Structure Of The Cue Domain Of The E3 Ubiquitin Ligase Amfr (Gp78)
To Be Published
PubMed: search

(-) Compounds

Molecule 1 - E3 UBIQUITIN-PROTEIN LIGASE AMFR
    Chains: A
    EC Number: 6.3.2.-
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PET42A
    Expression System Strain: BL21
    Expression System Taxid: 511693
    Expression System Vector Type: PLASMID
    Fragment: CUE DOMAIN (UNP RESIDUES 456-498)
    Gene: AMFR, RNF45
    Organism Common: HUMAN
    Organism Scientific: HOMO SAPIENS
    Organism Taxid: 9606
    Synonym: AUTOCRINE MOTILITY FACTOR RECEPTOR, ISOFORM 2, AMF RECEPTOR, ISOFORM 2, RING FINGER PROTEIN 45, GP78

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit : A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 4G3O)

(-) Sites  (0, 0)

(no "Site" information available for 4G3O)

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4G3O)

(-) Cis Peptide Bonds  (0, 0)

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 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

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(-) PROSITE Motifs  (0, 0)

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(-) Exons   (0, 0)

(no "Exon" information available for 4G3O)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
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SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:53
                                                                                     
               SCOP domains ----------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------- Transcript
                 4g3o A 446 RGSENLYFQGQLNAMAHQIQEMFPQVPYHLVLQDLQLTRSVEITTDNILEGRI 498
                                   455       465       475       485       495
   Legend:   → Mismatch (orange background)
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  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4G3O)

(-) CATH Domains  (0, 0)

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(-) Pfam Domains  (0, 0)

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(-) Gene Ontology  (42, 42)

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  AMFR_HUMAN | Q9UKV5
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        AMFR_HUMAN | Q9UKV5: 2ejs 2lvn 2lvo 2lvp 2lvq 2lxh 2lxp 3fsh 3h8k 3tiw 4lad

(-) Related Entries Specified in the PDB File

(no "Related Entries Specified in the PDB File" available for 4G3O)