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(-) Description

Title :  INFLUENZA B/BRISBANE/60/2008 HEMAGGLUTININ FAB CR8059 COMPLEX
 
Authors :  C. Dreyfus, N. S. Laursen, I. A. Wilson
Date :  25 Jun 12  (Deposition) - 22 Aug 12  (Release) - 03 Oct 12  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  5.65
Chains :  Asym. Unit :  A,B,C,D,E,F,H,L
Biol. Unit 1:  A,B,H,L  (3x)
Biol. Unit 2:  C,D,E,F  (3x)
Keywords :  Antibody, Fab Fragment, Monoclonal, Immunoglobulin, Viral Protein- Immune System Complex (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  C. Dreyfus, N. S. Laursen, T. Kwaks, D. Zuijdgeest, R. Khayat, D. C. Ekiert, J. H. Lee, Z. Metlagel, M. V. Bujny, M. Jongeneelen, R. Van Der Vlugt, M. Lamrani, H. J. Korse, E. Geelen, Sahin, M. Sieuwerts, J. P. Brakenhoff, R. Vogels, O. T. Li, L. L. Poon, M. Peiris, W. Koudstaal, A. B. Ward, I. A. Wilson, J. Goudsmit, R. H. Friesen
Highly Conserved Protective Epitopes On Influenza B Viruses
Science V. 337 1343 2012
PubMed-ID: 22878502  |  Reference-DOI: 10.1126/SCIENCE.1222908

(-) Compounds

Molecule 1 - HEMAGGLUTININ HA1
    Chains: A, C
    Engineered: YES
    Expression System: SPODOPTERA FRUGIPERDA
    Expression System Common: FALL ARMYWORM
    Expression System Taxid: 7108
    Expression System Vector Type: BACULOVIRUS
    Fragment: UNP RESIDUES 16-362
    Gene: HA
    Organism Scientific: INFLUENZA B VIRUS
    Organism Taxid: 604436
    Strain: B/BRISBANE/60/2008
    Synonym: HEMAGGLUTININ RECEPTOR BINDING SUBUNIT HA1
 
Molecule 2 - HEMAGGLUTININ HA2
    Chains: B, D
    Engineered: YES
    Expression System: SPODOPTERA FRUGIPERDA
    Expression System Common: FALL ARMYWORM
    Expression System Taxid: 7108
    Expression System Vector Type: BACULOVIRUS
    Fragment: UNP RESIDUES 363-538
    Gene: HA
    Organism Scientific: INFLUENZA B VIRUS
    Organism Taxid: 604436
    Strain: B/BRISBANE/60/2008
    Synonym: HEMAGGLUTININ MEMBRANE FUSION SUBUNIT HA2
 
Molecule 3 - ANTIBODY CR8059 HEAVY CHAIN
    Chains: E, H
    Engineered: YES
    Expression System: SPODOPTERA FRUGIPERDA
    Expression System Common: FALL ARMYWORM
    Expression System Taxid: 7108
    Expression System Vector Type: BACULOVIRUS
    Fragment: FAB
    Organism Common: HUMAN
    Organism Scientific: HOMO SAPIENS
    Organism Taxid: 9606
 
Molecule 4 - ANTIBODY CR8059 LIGHT CHAIN
    Chains: F, L
    Engineered: YES
    Expression System: SPODOPTERA FRUGIPERDA
    Expression System Common: FALL ARMYWORM
    Expression System Taxid: 7108
    Expression System Vector Type: BACULOVIRUS
    Fragment: FAB
    Organism Common: HUMAN
    Organism Scientific: HOMO SAPIENS
    Organism Taxid: 9606

 Structural Features

(-) Chains, Units

  12345678
Asymmetric Unit : ABCDEFHL
Biological Unit 1 (3x): AB    HL
Biological Unit 2 (3x):   CDEF  

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (2, 20)

Asymmetric Unit (2, 20)
No.NameCountTypeFull Name
1BMA2Ligand/IonBETA-D-MANNOSE
2NAG18Ligand/IonN-ACETYL-D-GLUCOSAMINE
Biological Unit 1 (2, 30)
No.NameCountTypeFull Name
1BMA3Ligand/IonBETA-D-MANNOSE
2NAG27Ligand/IonN-ACETYL-D-GLUCOSAMINE
Biological Unit 2 (2, 30)
No.NameCountTypeFull Name
1BMA3Ligand/IonBETA-D-MANNOSE
2NAG27Ligand/IonN-ACETYL-D-GLUCOSAMINE

(-) Sites  (20, 20)

Asymmetric Unit (20, 20)
No.NameEvidenceResiduesDescription
01AC1SOFTWAREASN A:145 , ASN A:148 , GLY A:149 , ASN A:150 , NAG A:402BINDING SITE FOR RESIDUE NAG A 401
02AC2SOFTWARENAG A:401BINDING SITE FOR RESIDUE NAG A 402
03AC3SOFTWAREGLU A:289 , ASN A:301 , NAG A:404BINDING SITE FOR RESIDUE NAG A 403
04AC4SOFTWAREGLU A:289 , NAG A:403BINDING SITE FOR RESIDUE NAG A 404
05AC5SOFTWAREASN A:330 , NAG A:406BINDING SITE FOR RESIDUE NAG A 405
06AC6SOFTWARENAG A:405BINDING SITE FOR RESIDUE NAG A 406
07AC7SOFTWAREASN A:194 , GLN A:197 , SER A:240 , NAG A:408BINDING SITE FOR RESIDUE NAG A 407
08AC8SOFTWARENAG A:407 , BMA A:409BINDING SITE FOR RESIDUE NAG A 408
09AC9SOFTWARENAG A:408BINDING SITE FOR RESIDUE BMA A 409
10BC1SOFTWAREASN A:230BINDING SITE FOR RESIDUE NAG A 410
11BC2SOFTWAREASN C:145 , ASN C:148 , GLY C:149 , ASN C:150 , NAG C:402BINDING SITE FOR RESIDUE NAG C 401
12BC3SOFTWARENAG C:401 , BMA C:403BINDING SITE FOR RESIDUE NAG C 402
13BC4SOFTWARENAG C:402BINDING SITE FOR RESIDUE BMA C 403
14BC5SOFTWAREGLU C:289 , ASN C:301 , NAG C:405BINDING SITE FOR RESIDUE NAG C 404
15BC6SOFTWAREGLU C:289 , NAG C:404BINDING SITE FOR RESIDUE NAG C 405
16BC7SOFTWAREASN C:330 , NAG C:407BINDING SITE FOR RESIDUE NAG C 406
17BC8SOFTWARENAG C:406BINDING SITE FOR RESIDUE NAG C 407
18BC9SOFTWAREASN C:194 , GLN C:197 , SER C:240 , NAG C:409BINDING SITE FOR RESIDUE NAG C 408
19CC1SOFTWARENAG C:408BINDING SITE FOR RESIDUE NAG C 409
20CC2SOFTWAREASN C:230BINDING SITE FOR RESIDUE NAG C 410

(-) SS Bonds  (22, 22)

Asymmetric Unit
No.Residues
1A:4 -B:484
2A:54 -A:57
3A:60 -A:72
4A:94 -A:143
5A:178 -A:272
6A:292 -A:318
7B:491 -B:495
8C:4 -D:484
9C:54 -C:57
10C:60 -C:72
11C:94 -C:143
12C:178 -C:272
13C:292 -C:318
14D:491 -D:495
15E:22 -E:92
16E:140 -E:196
17F:23 -F:88
18F:134 -F:193
19H:22 -H:92
20H:140 -H:196
21L:23 -L:88
22L:134 -L:193

(-) Cis Peptide Bonds  (8, 8)

Asymmetric Unit
No.Residues
1Leu A:284 -Pro A:285
2Leu C:284 -Pro C:285
3Phe E:146 -Pro E:147
4Glu E:148 -Pro E:149
5Tyr F:140 -Pro F:141
6Phe H:146 -Pro H:147
7Glu H:148 -Pro H:149
8Tyr L:140 -Pro L:141

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4FQK)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4FQK)

(-) Exons   (0, 0)

(no "Exon" information available for 4FQK)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:337
                                                                                                                                                                                                                                                                                                                                                                                  
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeee....eee.......eee.eee...........ee................hhhhhhhh............eee..............hhhhhhhhhhhhhhhhh.eee.................eee.................eeeee............eeeee........eeeeeeeeee.hhhhhhhhh......eeeeee..eeeeee...................eeeeeeeee.....eeeee...eeee...eeee...eee........ee.eee...eee.....ee......eee...ee.....eee......... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                4fqk A    1 DRICTGSNSPHVVKTATQGEVNVGVIPLTTTPTKSHFANLKGTETRGKLCPKCLNCTDLDVALGRPKCTGKIPSARVSILHEVRPVTSGCFPIMHDRTKIRQLPNLLRGYEHIRLSTHNVINAENAPGGPYKIGTSGSCPNITNGNGFFATMAWAVPKNDKNKTATNPLTIEVPYICTEGEDQITVWGFHSDNETQMAKLYGDSKPQKFTSSANGVTTHYVSQIGGFPNQTEDGGLPQSGRIVVDYMVQKSGKTGTITYQRGILLPQKVWCASGRSKVIKGSLPLIGEADCLHEKYGGLNKSKPYYTGEHAKAIGNCPIWVKTPLKLANGTKYRPPA  338
                                 || 13        23  ||    34        44        54        64        74        84        94       104       114       124       134       144       154      163A||     171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       
                                 6|              26|                                                                                                                                    163A||                                                                                                                                                                               
                                 10               28                                                                                                                                     163B|                                                                                                                                                                               
                                                                                                                                                                                          163C                                                                                                                                                                               


Chain B from PDB  Type:PROTEIN  Length:139
                                                                                                                                                                            
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeee......eeeehhhhhhhh.hhhhhhhhh................hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhh....eee.....eee....hhhhhhhhhh............. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                4fqk B  369 HGYTSHGAHGVAVAADLKSTQEAITKNLNSLSELEVKNLQRLSGAMDELHNEILELDEKVDDLRADTISSQIELAVLLSNEGIINSELALERKLKKMLGPSAVEIGNGCFETKHKCNQTCLDRIAAGTFDAGEFSLPTF  514
                                   378       388  ||   401       411       421       431       441       451      |465       475       485       495       505         
                                                391|                                                            458|                                                   
                                                 395                                                             463                                                   


Chain C from PDB  Type:PROTEIN  Length:337
                                                                                                                                                                                                                                                                                                                                                                                  
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeee....eee.......eee.eee...........ee................hhhhhhhh............eee..............hhhhhhhhhhhhhhhhh.eee.................eee.................eeeee............eeeee........eeeeeeeeee.hhhhhhhhh......eeeeee..eeeeee...................eeeeeeeee.....eeeee...eeee...eeee...eee........ee.eee...eee.....ee......eee...ee.....eee......... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                4fqk C    1 DRICTGSNSPHVVKTATQGEVNVGVIPLTTTPTKSHFANLKGTETRGKLCPKCLNCTDLDVALGRPKCTGKIPSARVSILHEVRPVTSGCFPIMHDRTKIRQLPNLLRGYEHIRLSTHNVINAENAPGGPYKIGTSGSCPNITNGNGFFATMAWAVPKNDKNKTATNPLTIEVPYICTEGEDQITVWGFHSDNETQMAKLYGDSKPQKFTSSANGVTTHYVSQIGGFPNQTEDGGLPQSGRIVVDYMVQKSGKTGTITYQRGILLPQKVWCASGRSKVIKGSLPLIGEADCLHEKYGGLNKSKPYYTGEHAKAIGNCPIWVKTPLKLANGTKYRPPA  338
                                 || 13        23  ||    34        44        54        64        74        84        94       104       114       124       134       144       154      163A||     171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       
                                 6|              26|                                                                                                                                    163A||                                                                                                                                                                               
                                 10               28                                                                                                                                     163B|                                                                                                                                                                               
                                                                                                                                                                                          163C                                                                                                                                                                               


Chain D from PDB  Type:PROTEIN  Length:140
                                                                                                                                                                             
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeee......eeeehhhhhhhh.hhhhhhhhh................hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhh....eee.....eee....hhhhhhhhhh............. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                4fqk D  369 HGYTSHGAHGVAVAADLKSTQEAITKNLNSLSELEVKNLQRLSGAMDELHNEILELDEKVDDLRADTISSQIELAVLLSNEGIINSELLALERKLKKMLGPSAVEIGNGCFETKHKCNQTCLDRIAAGTFDAGEFSLPTF  514
                                   378       388  ||   401       411       421       431       441       451      |464       474       484       494       504       514
                                                391|                                                            458|                                                    
                                                 395                                                             462                                                    


Chain E from PDB  Type:PROTEIN  Length:220
                                                                                                                                                                                                                                                             
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeee...ee......eeeeeeee..hhhh.eeeeeee.....eeeeeeee.....eee.hhhh..eeeeee....eeeeee...hhhhheeeeeeee............eeee...eeee........eeeee....eeeeeeeeeee.....eeee.hhh....eee...ee.....eeeeeeeeee.........eeeeeehhhheeeeee..... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                4fqk E    1 QVQLVQSGAEVKKPGASVRVSCRASGYIFTESGITWVRQAPGQGLEWMGWISGYSGDTKYAQKLQGRVTMTKDTSTTTAYMELRSLRYDDTAVYYCARDVQYSGSYLGAYYFDYWSPGTLVTVSASTKGPSVFPLAPSGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKS  215
                                    10        20        30        40        50  |     59        69        79   |||  86        96    ||100F||     108  ||   119       135       145       155       165       175       185       195       205       215
                                                                              52A                            82A||               100A|||||||        111|           127|                                                                                 
                                                                                                              82B|                100B||||||         113            134                                                                                 
                                                                                                               82C                 100C|||||                                                                                                            
                                                                                                                                    100D||||                                                                                                            
                                                                                                                                     100E|||                                                                                                            
                                                                                                                                      100F||                                                                                                            
                                                                                                                                       100G|                                                                                                            
                                                                                                                                        100H                                                                                                            


Chain F from PDB  Type:PROTEIN  Length:213
                                                                                                                                                                                                                                                      
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ........eee......eeeeee...........eeeee......eeee.............eeeeee..eeeeee...hhhhheeeeeeeee....eeee...eeee........eeeee..hhhhhhh..eeeeeeeeee.....eeeeee..eee...eee...ee.....eeeeeeeeehhhhhhh...eeeeee....eeeeee.... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                4fqk F    1 QSVLTQPPSASGTPGQRVTISCSGSSSNIGTNYVYWYQQFPGTAPKLLIYRSYQRPSGVPDRFSGSKSGSSASLAISGLQSEDEADYYCATWDDSLNGWVFGGGTKLTVRQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTE  210
                                    11        21      ||29        39        49        59        69        79        89      ||97       107       117       127       137       147       157       167       177       187       197       207   
                                    9|              27A|                                                                  95A|                                                                                                                   
                                    11               27B                                                                   95B                                                                                                                   


Chain H from PDB  Type:PROTEIN  Length:221
                                                                                                                                                                                                                                                              
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeee...ee......eeeeeeee..hhhh.eeeeeee.....eeeeeeee.....eee.hhhh..eeeeee....eeeeee...hhhhheeeeeeee............eeee...eeee........eeeee....eeeeeeeeeee.....eeee.hhh....eee...ee.....eeeeeeeeee.........eeeeeehhhheeeeee...... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                4fqk H    1 QVQLVQSGAEVKKPGASVRVSCRASGYIFTESGITWVRQAPGQGLEWMGWISGYSGDTKYAQKLQGRVTMTKDTSTTTAYMELRSLRYDDTAVYYCARDVQYSGSYLGAYYFDYWSPGTLVTVSASTKGPSVFPLAPSGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSC  216
                                    10        20        30        40        50  |     59        69        79   |||  86        96    ||100F||     108  ||   119       135       145       155       165       175       185       195       205       215 
                                                                              52A                            82A||               100A|||||||        111|           127|                                                                                  
                                                                                                              82B|                100B||||||         113            134                                                                                  
                                                                                                               82C                 100C|||||                                                                                                             
                                                                                                                                    100D||||                                                                                                             
                                                                                                                                     100E|||                                                                                                             
                                                                                                                                      100F||                                                                                                             
                                                                                                                                       100G|                                                                                                             
                                                                                                                                        100H                                                                                                             


Chain L from PDB  Type:PROTEIN  Length:214
                                                                                                                                                                                                                                                       
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ........eee......eeeeee...........eeeee......eeee.............eeeeee..eeeeee...hhhhheeeeeeeee....eeee...eeee........eeeee..hhhhhhh..eeeeeeeeee.....eeeeee..eee...eee...ee.....eeeeeeeeehhhhhhh...eeeeee....eeeeee..... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                4fqk L    1 QSVLTQPPSASGTPGQRVTISCSGSSSNIGTNYVYWYQQFPGTAPKLLIYRSYQRPSGVPDRFSGSKSGSSASLAISGLQSEDEADYYCATWDDSLNGWVFGGGTKLTVRQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTEC  211
                                    11        21      ||29        39        49        59        69        79        89      ||97       107       117       127       137       147       157       167       177       187       197       207    
                                    9|              27A|                                                                  95A|                                                                                                                    
                                    11               27B                                                                   95B
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    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4FQK)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4FQK)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4FQK)

(-) Gene Ontology  (14, 14)

Asymmetric Unit(hide GO term definitions)

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  C0LT38_9INFB | C0LT38
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/TrEMBL
        C0LT38_9INFB | C0LT38: 4fqm

(-) Related Entries Specified in the PDB File

4fnk 4fqh 4fqi 4fqj 4fql 4fqm 4fqv 4fqy