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(-) Description

Title :  CRYSTAL STRUCTURE OF PUTATIVE THIOREDOXIN REDUCTASE TRXB FROM BACILLUS ANTHRACIS
 
Authors :  N. Maltseva, Y. Kim, K. Kwon, W. F. Anderson, A. Joachimiak, Center For Structural Genomics Of Infectious Diseases (Csgid)
Date :  12 Jun 12  (Deposition) - 08 Aug 12  (Release) - 08 Aug 12  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.40
Chains :  Asym. Unit :  A,B,C,D
Biol. Unit 1:  A,B  (1x)
Biol. Unit 2:  C,D  (1x)
Keywords :  Structural Genomics, Niaid, National Institute Of Allergy And Infectious Diseases, Center For Structural Genomics Of Infectious Diseases, Csgid, Alpha Beta Beta Sandwich, Reductase, Cytosol, Oxidoreductase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  N. Maltseva, Y. Kim, K. Kwon, W. F. Anderson, A. Joachimiak, Center For Structural Genomics Of Infectious Diseases (Csgid)
Crystal Structure Of Putative Thioredoxin Reductase Trxb From Bacillus Anthracis
To Be Published
PubMed: search

(-) Compounds

Molecule 1 - PUTATIVE THIOREDOXIN REDUCTASE
    Chains: A, B, D
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PMCSG7
    Expression System Strain: BL21 MAGIC
    Expression System Taxid: 562
    Expression System Vector Type: PLASMID
    Gene: BA_2768, GBAA_2768
    Organism Common: ANTHRAX,ANTHRAX BACTERIUM
    Organism Scientific: BACILLUS ANTHRACIS
    Organism Taxid: 261594
    Strain: AMES ANCESTOR
 
Molecule 2 - PUTATIVE THIOREDOXIN REDUCTASE
    Chains: C
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PMCSG7
    Expression System Strain: BL21 MAGIC
    Expression System Taxid: 562
    Expression System Vector Type: PLASMID
    Gene: BA_2768, GBAA_2768
    Organism Common: ANTHRAX,ANTHRAX BACTERIUM
    Organism Scientific: BACILLUS ANTHRACIS
    Organism Taxid: 261594
    Strain: AMES ANCESTOR

 Structural Features

(-) Chains, Units

  1234
Asymmetric Unit : ABCD
Biological Unit 1 (1x): AB  
Biological Unit 2 (1x):   CD

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (5, 29)

Asymmetric Unit (5, 29)
No.NameCountTypeFull Name
1FAD4Ligand/IonFLAVIN-ADENINE DINUCLEOTIDE
2GOL1Ligand/IonGLYCEROL
3MG4Ligand/IonMAGNESIUM ION
4MSE19Mod. Amino AcidSELENOMETHIONINE
5MSO1Mod. Amino AcidSELENOMETHIONINE SELENOXIDE
Biological Unit 1 (2, 12)
No.NameCountTypeFull Name
1FAD2Ligand/IonFLAVIN-ADENINE DINUCLEOTIDE
2GOL-1Ligand/IonGLYCEROL
3MG-1Ligand/IonMAGNESIUM ION
4MSE10Mod. Amino AcidSELENOMETHIONINE
5MSO-1Mod. Amino AcidSELENOMETHIONINE SELENOXIDE
Biological Unit 2 (4, 13)
No.NameCountTypeFull Name
1FAD2Ligand/IonFLAVIN-ADENINE DINUCLEOTIDE
2GOL1Ligand/IonGLYCEROL
3MG-1Ligand/IonMAGNESIUM ION
4MSE9Mod. Amino AcidSELENOMETHIONINE
5MSO1Mod. Amino AcidSELENOMETHIONINE SELENOXIDE

(-) Sites  (9, 9)

Asymmetric Unit (9, 9)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREGLY A:10 , GLY A:12 , PRO A:13 , ALA A:14 , ASP A:33 , ASN A:34 , ASN A:35 , THR A:36 , ASN A:37 , ARG A:38 , ASN A:39 , THR A:42 , SER A:45 , HIS A:46 , LYS A:60 , LYS A:78 , THR A:79 , VAL A:80 , ALA A:109 , THR A:110 , GLU A:114 , TYR A:126 , CYS A:136 , ASN A:235 , GLY A:268 , GLU A:269 , SER A:277 , LEU A:278 , ALA A:281 , HOH A:603 , HOH A:604 , HOH A:614 , HOH A:615 , HOH A:617BINDING SITE FOR RESIDUE FAD A 500
2AC2SOFTWARETHR A:42 , ASN A:44 , ASP A:137 , HOH A:605 , HOH A:610 , HOH A:611 , HOH A:612BINDING SITE FOR RESIDUE MG A 501
3AC3SOFTWAREGLY B:10 , GLY B:12 , PRO B:13 , ALA B:14 , ASP B:33 , ASN B:34 , ASN B:35 , THR B:36 , ASN B:37 , ARG B:38 , ASN B:39 , SER B:45 , HIS B:46 , LYS B:60 , LYS B:78 , VAL B:80 , ALA B:109 , THR B:110 , GLY B:111 , GLU B:114 , TYR B:126 , CYS B:136 , ASN B:235 , PHE B:237 , GLY B:268 , GLU B:269 , SER B:277 , LEU B:278 , ALA B:281 , HOH B:606BINDING SITE FOR RESIDUE FAD B 500
4AC4SOFTWAREGLY C:10 , GLY C:12 , PRO C:13 , ALA C:14 , ASP C:33 , ASN C:34 , ASN C:35 , THR C:36 , ASN C:37 , ARG C:38 , ASN C:39 , SER C:45 , HIS C:46 , LYS C:60 , LYS C:78 , VAL C:80 , ALA C:109 , THR C:110 , GLY C:111 , GLU C:114 , TYR C:126 , CYS C:136 , ASN C:235 , GLY C:268 , GLU C:269 , SER C:277 , LEU C:278 , ALA C:281 , HOH C:601 , HOH C:602 , HOH C:603 , HOH C:608 , HOH C:612 , HOH C:622 , HOH C:651BINDING SITE FOR RESIDUE FAD C 500
5AC5SOFTWAREASN C:44 , ASP C:137 , HOH C:611 , HOH C:612 , HOH C:624BINDING SITE FOR RESIDUE MG C 501
6AC6SOFTWAREMSO C:68 , HOH C:644 , HOH C:645 , HOH C:646 , HOH C:647 , HOH C:648BINDING SITE FOR RESIDUE MG C 502
7AC7SOFTWAREGLY D:10 , GLY D:12 , PRO D:13 , ALA D:14 , ASP D:33 , ASN D:34 , ASN D:35 , THR D:36 , ASN D:37 , ARG D:38 , ASN D:39 , SER D:45 , HIS D:46 , LYS D:60 , LYS D:78 , VAL D:80 , ALA D:109 , THR D:110 , GLU D:114 , TYR D:126 , CYS D:136 , ASN D:235 , GLY D:268 , GLU D:269 , SER D:277 , LEU D:278 , ALA D:281 , HOH D:606 , HOH D:608 , HOH D:609 , HOH D:610 , HOH D:612 , HOH D:615 , HOH D:621 , HOH D:632BINDING SITE FOR RESIDUE FAD D 500
8AC8SOFTWAREASN D:44 , ASP D:137 , HOH D:615 , HOH D:616 , HOH D:617 , HOH D:648BINDING SITE FOR RESIDUE MG D 501
9AC9SOFTWAREGLU C:66 , THR D:50 , ARG D:51 , ASP D:52BINDING SITE FOR RESIDUE GOL D 502

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4FK1)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 4FK1)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4FK1)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4FK1)

(-) Exons   (0, 0)

(no "Exon" information available for 4FK1)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:299
                                                                                                                                                                                                                                                                                                                                           
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeee..hhhhhhhhhhhhhh...eeeee...hhhhhh............hhhhhhhhhhhhhh....eeeee..eeeeee.....eeeee....eeeeeeeee....eee.....hhhhhh...ee.hhhhhhhhhh...eeee..hhhhhhhhhhhhh.....eeee......hhhhhhhhhh....ee...eeeeehhhhh..eeee....ee...eeee..eee...hhhhhh......................eee.hhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4fk1 A   3 YIDCAVIGAGPAGLNASLVLGRARKQIALFDNNTNRNRVTQNSHGFITRDGIKPEEFKEIGLNEVmKYPSVHYYEKTVVmITKQSTGLFEIVTKDHTKYLAERVLLATGmQEEFPSIPNVREYYGKSLFSCPYCDGWELKDQPLIIISENEDHTLHmTKLVYNWSTDLVIATNGNELSQTImDELSNKNIPVITESIRTLQGEGGYLKKVEFHSGLRIERAGGFIVPTFFRPNQFIEQLGCELQSNGTFVIDDFGRTSEKNIYLAGETTTQGPSSLIIAASQGNKAAIAINSDITDERF 301
                                    12        22        32        42        52        62     |  72        82        92       102       112       122       132       142       152      |162       172       182 |     192       202       212       222       232       242       252       262       272       282       292         
                                                                                            68-MSE        82-MSE                       112-MSE                                        159-MSE                  184-MSE                                                                                                                 


Chain B from PDB  Type:PROTEIN  Length:298
                                                                                                                                                                                                                                                                                                                                          
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeee..hhhhhhhhhhhhh....eeee....hhhhhh............hhhhhhhhhhhhhh....eeee...eeeeee.....eeeee....eeee.eeee....eee.....hhhhhh...ee.hhhhhhhhhh...eeee..hhhhhhhhhhhhh.....eeee......hhhhhhhhhhh...ee...eeeee.......eeee....eee..eeee..eee...hhhhhh......................eee.hhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4fk1 B   4 IDCAVIGAGPAGLNASLVLGRARKQIALFDNNTNRNRVTQNSHGFITRDGIKPEEFKEIGLNEVmKYPSVHYYEKTVVmITKQSTGLFEIVTKDHTKYLAERVLLATGmQEEFPSIPNVREYYGKSLFSCPYCDGWELKDQPLIIISENEDHTLHmTKLVYNWSTDLVIATNGNELSQTImDELSNKNIPVITESIRTLQGEGGYLKKVEFHSGLRIERAGGFIVPTFFRPNQFIEQLGCELQSNGTFVIDDFGRTSEKNIYLAGETTTQGPSSLIIAASQGNKAAIAINSDITDERF 301
                                    13        23        33        43        53        63    |   73        83        93       103       113       123       133       143       153     | 163       173       183|      193       203       213       223       233       243       253       263       273       283       293        
                                                                                           68-MSE        82-MSE                       112-MSE                                        159-MSE                  184-MSE                                                                                                                 


Chain C from PDB  Type:PROTEIN  Length:299
                                                                                                                                                                                                                                                                                                                                           
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeee..hhhhhhhhhhhhhh...eeee....hhhhhh............hhhhhhhhhhhhhh....eeee...eeeeee.....eeeee....eeeeeeeee....eee.....hhhhhh...ee.hhhhhhhhhh...eeee..hhhhhhhhhhhhh.....eeee......hhhhhhhhhhh...ee...eeeeehhhhh..eeee....eee..eeee..eee...hhhhhh......................eee.hhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4fk1 C   3 YIDCAVIGAGPAGLNASLVLGRARKQIALFDNNTNRNRVTQNSHGFITRDGIKPEEFKEIGLNEVmKYPSVHYYEKTVVmITKQSTGLFEIVTKDHTKYLAERVLLATGmQEEFPSIPNVREYYGKSLFSCPYCDGWELKDQPLIIISENEDHTLHmTKLVYNWSTDLVIATNGNELSQTImDELSNKNIPVITESIRTLQGEGGYLKKVEFHSGLRIERAGGFIVPTFFRPNQFIEQLGCELQSNGTFVIDDFGRTSEKNIYLAGETTTQGPSSLIIAASQGNKAAIAINSDITDERF 301
                                    12        22        32        42        52        62     |  72        82        92       102       112       122       132       142       152      |162       172       182 |     192       202       212       222       232       242       252       262       272       282       292         
                                                                                            68-MSO        82-MSE                       112-MSE                                        159-MSE                  184-MSE                                                                                                                 


Chain D from PDB  Type:PROTEIN  Length:299
                                                                                                                                                                                                                                                                                                                                           
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeee..hhhhhhhhhhhhh....eeee....hhhhhh............hhhhhhhhhhhhhh....eeee...eeeeee.....eeeee....eeeeeeeee....eee.....hhhhhh...ee.hhhhhhhhhh...eeee..hhhhhhhhhhhhh.....eeee......hhhhhhhhhh....ee...eeeeeee..eeeeeee....eee..eee...eee...hhhhhh......................eee.hhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4fk1 D   3 YIDCAVIGAGPAGLNASLVLGRARKQIALFDNNTNRNRVTQNSHGFITRDGIKPEEFKEIGLNEVmKYPSVHYYEKTVVmITKQSTGLFEIVTKDHTKYLAERVLLATGmQEEFPSIPNVREYYGKSLFSCPYCDGWELKDQPLIIISENEDHTLHmTKLVYNWSTDLVIATNGNELSQTImDELSNKNIPVITESIRTLQGEGGYLKKVEFHSGLRIERAGGFIVPTFFRPNQFIEQLGCELQSNGTFVIDDFGRTSEKNIYLAGETTTQGPSSLIIAASQGNKAAIAINSDITDERF 301
                                    12        22        32        42        52        62     |  72        82        92       102       112       122       132       142       152      |162       172       182 |     192       202       212       222       232       242       252       262       272       282       292         
                                                                                            68-MSE        82-MSE                       112-MSE                                        159-MSE                  184-MSE
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4FK1)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4FK1)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4FK1)

(-) Gene Ontology  (3, 3)

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