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Biological Unit 5 (Jmol Viewer)

Biological Unit 6 (Jmol Viewer)

Title :   STRUCTURE OF THE EFFECTOR PROTEIN TSE1 FROM PSEUDOMONAS AERUGINOSA

Authors :   J. Benz, C. Sendlmeier, T. R. M. Barends, A. Meinhart

Date :   04 Jun 12 (Deposition) - 20 Jun 12 (Release) - 25 Jul 12 (Revision)

Method :   X-RAY DIFFRACTION

Resolution :   1.70

Chains :   Asym. Unit : A,B,C,D
Biol. Unit 1: A  (1x)
Biol. Unit 2: B  (1x)
Biol. Unit 3: C  (1x)
Biol. Unit 4: D  (1x)
Biol. Unit 5: A,C  (1x)
Biol. Unit 6: B,D  (1x)

Keywords :   N1Pc/P60 Superfamily, Peptidoglycan Hydrolase, Cytosol, Hydrolase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   J. Benz, C. Sendlmeier, T. R. Barends, A. Meinhart
Structural Insights Into The Effector - Immunity System Tse1/Tsi1 From Pseudomonas Aeruginosa.
Plos One V. 7 40453 2012
PubMed-ID: 22792331 | Reference-DOI: 10.1371/JOURNAL.PONE.0040453

Molecule 1 - TSE1
	Chains	:	A, B, C, D
	Engineered	:	YES
	Expression System	:	ESCHERICHIA COLI
	Expression System Strain	:	BL21(DE3)-RIL
	Expression System Taxid	:	562
	Expression System Vector Type	:	PET21D
	Gene	:	PA1844
	Organism Scientific	:	PSEUDOMONAS AERUGINOSA
	Organism Taxid	:	208964
	Strain	:	ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228

		1	2	3	4
Asymmetric Unit	:	A	B	C	D
Biological Unit 1 (1x)	:	A
Biological Unit 2 (1x)	:		B
Biological Unit 3 (1x)	:			C
Biological Unit 4 (1x)	:				D
Biological Unit 5 (1x)	:	A		C
Biological Unit 6 (1x)	:		B		D

Summary Information (see also Sequences/Alignments below)

Asymmetric Unit (3, 7)

No.	Name	Count	Type	Full Name
1	CL	3	Ligand/Ion	CHLORIDE ION
2	GOL	2	Ligand/Ion	GLYCEROL
3	SCN	2	Ligand/Ion	THIOCYANATE ION

Biological Unit 1 (1, 1)

No.	Name	Count	Type	Full Name
1	CL	-1	Ligand/Ion	CHLORIDE ION
2	GOL	-1	Ligand/Ion	GLYCEROL
3	SCN	1	Ligand/Ion	THIOCYANATE ION

Biological Unit 2 (2, 2)

No.	Name	Count	Type	Full Name
1	CL	-1	Ligand/Ion	CHLORIDE ION
2	GOL	1	Ligand/Ion	GLYCEROL
3	SCN	1	Ligand/Ion	THIOCYANATE ION

Biological Unit 3 (0, 0)

No.	Name	Count	Type	Full Name
1	CL	-1	Ligand/Ion	CHLORIDE ION
2	GOL	-1	Ligand/Ion	GLYCEROL
3	SCN	-1	Ligand/Ion	THIOCYANATE ION

Biological Unit 4 (1, 1)

No.	Name	Count	Type	Full Name
1	CL	-1	Ligand/Ion	CHLORIDE ION
2	GOL	1	Ligand/Ion	GLYCEROL
3	SCN	-1	Ligand/Ion	THIOCYANATE ION

Biological Unit 5 (1, 1)

No.	Name	Count	Type	Full Name
1	CL	-1	Ligand/Ion	CHLORIDE ION
2	GOL	-1	Ligand/Ion	GLYCEROL
3	SCN	1	Ligand/Ion	THIOCYANATE ION

Biological Unit 6 (2, 3)

No.	Name	Count	Type	Full Name
1	CL	-1	Ligand/Ion	CHLORIDE ION
2	GOL	2	Ligand/Ion	GLYCEROL
3	SCN	1	Ligand/Ion	THIOCYANATE ION

Asymmetric Unit (7, 7)

No.	Name	Evidence	Residues	Description
1	AC1	SOFTWARE	ASN A:49 , TYR A:89 , HOH A:305 , ALA C:22	BINDING SITE FOR RESIDUE CL A 201
2	AC2	SOFTWARE	LYS A:73 , SER A:144	BINDING SITE FOR RESIDUE CL A 202
3	AC3	SOFTWARE	SER A:120 , GLN A:121 , LEU A:123 , LYS A:124 , GLN D:121 , LEU D:123	BINDING SITE FOR RESIDUE SCN A 203
4	AC4	SOFTWARE	SER B:120 , GLN B:121 , LEU B:123 , GLN C:121	BINDING SITE FOR RESIDUE SCN B 201
5	AC5	SOFTWARE	ASN B:29 , CYS B:30 , SER B:31 , ASN B:49 , ALA B:50 , ILE B:113 , HOH B:304 , HOH B:305	BINDING SITE FOR RESIDUE GOL B 202
6	AC6	SOFTWARE	LEU A:21 , ALA A:22 , SER C:31 , ASN C:49 , ALA C:50 , TYR C:89 , HOH C:303	BINDING SITE FOR RESIDUE CL C 201
7	AC7	SOFTWARE	ASN D:29 , SER D:31 , ASN D:49 , ALA D:50 , TYR D:89 , ILE D:113 , HOH D:302 , HOH D:306	BINDING SITE FOR RESIDUE GOL D 201

(no "SS Bond" information available for 4FGE)

(no "Cis Peptide Bond" information available for 4FGE)

(no "SAP(SNP)/Variant" information available for 4FGE)

(no "PROSITE Motif" information available for 4FGE)

(no "Exon" information available for 4FGE)

Asymmetric Unit

Reformat:	Number of residues per line = ('0' or empty: single-line sequence representation)
	Number of residues per labelling interval =
	UniProt sequence: complete aligned part

Show mapping:	SCOP domains	CATH domains	Pfam domains	Secondary structure (by author)
	SAPs(SNPs)	PROSITE motifs	Exons
	(details for a mapped element are shown in a popup box when the mouse pointer rests over it)

Chain A from PDB  Type:PROTEIN  Length:150
                                                                                                                                                                                      
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ..hhhhhhhhhhhh........hhhhhhhhhhhhhhhhhh......hhhhhhhhhhhhhee..hhhhhhhhhhh...eeeee......eeeeeeeeeeehhheeeeee....hhhhheeeeee.hhh...hhhhhheeee.......... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 4fge A   3 SLDQCIVNACKNSWDKSYLAGTPNKDNCSGFVQSVAAELGVPMPRGNANAMVDGLEQSWTKLASGAEAAQKAAQGFLVIAGLKGRTYGHVAVVISGPLYRQKYPMCWCGSIAGAVGQSQGLKSVGQVWNRTDRDRLNYYVYSLASCSLPR 152
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152

Chain B from PDB  Type:PROTEIN  Length:147
                                                                                                                                                                                   
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..hhhhhhhhhhhh........hhhhhhhhhhhhhhhhhh......hhhhhhhhhhhhheee.hhhhhhhhhhh...eeeee......eeeeeeeeeeehhheeeeee....hhhhheeeeee.hhh...hhhhh.eeee....... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4fge B   3 SLDQCIVNACKNSWDKSYLAGTPNKDNCSGFVQSVAAELGVPMPRGNANAMVDGLEQSWTKLASGAEAAQKAAQGFLVIAGLKGRTYGHVAVVISGPLYRQKYPMCWCGSIAGAVGQSQGLKSVGQVWNRTDRDRLNYYVYSLASCS 149
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142

Chain C from PDB  Type:PROTEIN  Length:149
                                                                                                                                                                                     
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..hhhhhhhhhhhhh.......hhhhhhhhhhhhhhhhhh......hhhhhhhhhhhhheee.hhhhhhhhhhh...eeeee......eeeeeeeeeeehhheeeeee....hhhhheeeeee.hhh...hhhhh.eeee......... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4fge C   3 SLDQCIVNACKNSWDKSYLAGTPNKDNCSGFVQSVAAELGVPMPRGNANAMVDGLEQSWTKLASGAEAAQKAAQGFLVIAGLKGRTYGHVAVVISGPLYRQKYPMCWCGSIAGAVGQSQGLKSVGQVWNRTDRDRLNYYVYSLASCSLP 151
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142

Chain D from PDB  Type:PROTEIN  Length:148
                                                                                                                                                                                    
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..hhhhhhhhhhhh........hhhhhhhhhhhhhhhhhh......hhhhhhhhhhhhhee..hhhhhhhhhhh...eeeee......eeeeeeeeeeehhheeeeee....hhhhheeeeeehhhhh..hhhhh.eeee........ Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4fge D   3 SLDQCIVNACKNSWDKSYLAGTPNKDNCSGFVQSVAAELGVPMPRGNANAMVDGLEQSWTKLASGAEAAQKAAQGFLVIAGLKGRTYGHVAVVISGPLYRQKYPMCWCGSIAGAVGQSQGLKSVGQVWNRTDRDRLNYYVYSLASCSL 150
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142

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	x	→ Chemical Group	(purple background, 'x', labelled with number + name, e.g. ACE or NH2)
	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '\|'

(no "SCOP Domain" information available for 4FGE)

(no "CATH Domain" information available for 4FGE)

(no "Pfam Domain" information available for 4FGE)

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Description

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Ligands, Modified Residues, Ions (3, 7)

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