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(-) Description

Title :  CRYSTAL STRUCTURE OF A PROBABLE HYDROLYTIC ENZYME (PA3053) FROM PSEUDOMONAS AERUGINOSA PAO1 AT 1.50 A RESOLUTION
 
Authors :  Joint Center For Structural Genomics (Jcsg)
Date :  04 May 12  (Deposition) - 04 Jul 12  (Release) - 04 Jul 12  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.50
Chains :  Asym. Unit :  A
Biol. Unit 1:  A  (1x)
Biol. Unit 2:  A  (2x)
Keywords :  Alpha/Beta Hydrolase Fold, Structural Genomics, Joint Center For Structural Genomics, Jcsg, Protein Structure Initiative, Psi- Biology, Hydrolase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  Joint Center For Structural Genomics (Jcsg)
Crystal Structure Of A Probable Hydrolytic Enzyme (Pa3053) From Pseudomonas Aeruginosa Pao1 At 1. 50 A Resolution
To Be Published
PubMed: search

(-) Compounds

Molecule 1 - PROBABLE HYDROLYTIC ENZYME
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: SPEEDET
    Expression System Strain: PB1
    Expression System Taxid: 562
    Expression System Vector Type: PLASMID
    Fragment: UNP RESIDUES 22-335
    Gene: PA3053
    Organism Scientific: PSEUDOMONAS AERUGINOSA
    Organism Taxid: 208964
    Strain: ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228

 Structural Features

(-) Chains, Units

  1
Asymmetric Unit : A
Biological Unit 1 (1x): A
Biological Unit 2 (2x): A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (5, 23)

Asymmetric Unit (5, 23)
No.NameCountTypeFull Name
12PE1Ligand/IonNONAETHYLENE GLYCOL
2CL2Ligand/IonCHLORIDE ION
3EDO8Ligand/Ion1,2-ETHANEDIOL
4MSE8Mod. Amino AcidSELENOMETHIONINE
5SO44Ligand/IonSULFATE ION
Biological Unit 1 (4, 21)
No.NameCountTypeFull Name
12PE1Ligand/IonNONAETHYLENE GLYCOL
2CL-1Ligand/IonCHLORIDE ION
3EDO8Ligand/Ion1,2-ETHANEDIOL
4MSE8Mod. Amino AcidSELENOMETHIONINE
5SO44Ligand/IonSULFATE ION
Biological Unit 2 (4, 42)
No.NameCountTypeFull Name
12PE2Ligand/IonNONAETHYLENE GLYCOL
2CL-1Ligand/IonCHLORIDE ION
3EDO16Ligand/Ion1,2-ETHANEDIOL
4MSE16Mod. Amino AcidSELENOMETHIONINE
5SO48Ligand/IonSULFATE ION

(-) Sites  (15, 15)

Asymmetric Unit (15, 15)
No.NameEvidenceResiduesDescription
01AC1SOFTWARETRP A:236 , HOH A:763BINDING SITE FOR RESIDUE 2PE A 400
02AC2SOFTWAREALA A:195 , GLU A:196 , ARG A:227 , HOH A:593 , HOH A:618 , HOH A:737 , HOH A:769BINDING SITE FOR RESIDUE SO4 A 401
03AC3SOFTWAREGLY A:74 , LYS A:75 , ASN A:76 , PHE A:77 , HIS A:141 , SER A:142 , TYR A:206 , HIS A:313 , EDO A:407BINDING SITE FOR RESIDUE SO4 A 402
04AC4SOFTWAREALA A:319 , PRO A:320 , GLU A:321 , ARG A:322 , HOH A:776BINDING SITE FOR RESIDUE SO4 A 403
05AC5SOFTWAREARG A:181 , ARG A:189 , GLY A:274 , LYS A:275 , ASP A:276 , ALA A:277 , EDO A:406BINDING SITE FOR RESIDUE SO4 A 404
06AC6SOFTWAREVAL A:178 , PRO A:179 , ARG A:181 , TRP A:186 , GLY A:274 , ALA A:277 , HOH A:529BINDING SITE FOR RESIDUE EDO A 405
07AC7SOFTWARETRP A:186 , ALA A:272 , GLY A:274 , LYS A:275 , SO4 A:404 , HOH A:609BINDING SITE FOR RESIDUE EDO A 406
08AC8SOFTWARESER A:142 , TYR A:201 , TYR A:206 , HIS A:313 , SO4 A:402 , HOH A:581BINDING SITE FOR RESIDUE EDO A 407
09AC9SOFTWAREHIS A:73 , GLY A:74 , PHE A:77 , THR A:81 , TRP A:82 , HIS A:141 , GLN A:316 , HOH A:674BINDING SITE FOR RESIDUE EDO A 408
10BC1SOFTWAREARG A:95 , GLU A:129 , ARG A:130 , LEU A:131 , HOH A:775BINDING SITE FOR RESIDUE EDO A 409
11BC2SOFTWAREGLY A:103 , PHE A:104 , CYS A:105 , LYS A:109 , MSE A:225 , VAL A:234 , HOH A:565 , HOH A:781BINDING SITE FOR RESIDUE EDO A 410
12BC3SOFTWARETRP A:180 , ARG A:181 , SER A:182 , ASP A:185BINDING SITE FOR RESIDUE EDO A 411
13BC4SOFTWAREGLY A:33 , ASP A:35 , ASP A:185 , ARG A:217 , HOH A:562BINDING SITE FOR RESIDUE EDO A 412
14BC5SOFTWAREARG A:256BINDING SITE FOR RESIDUE CL A 413
15BC6SOFTWAREGLN A:118 , HOH A:592 , HOH A:734BINDING SITE FOR RESIDUE CL A 414

(-) SS Bonds  (1, 1)

Asymmetric Unit
No.Residues
1A:78 -A:105

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 4F0J)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4F0J)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4F0J)

(-) Exons   (0, 0)

(no "Exon" information available for 4F0J)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:312
                                                                                                                                                                                                                                                                                                                                                        
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ...................eeeeeee..eeeeeeeeee........eeeee.....hhhhhhhhhhhhhhh..eeeee................hhhhhhhhhhhhhhhh....eeeeeehhhhhhhhhhhhhh...eeeeeee......hhhhhh....hhhhhhhhhh..hhhhhhhhhhhhh.....hhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhh.hhhhhhhh...eeeeee.......hhhhhhhhhhh...hhhhhhhhhhhhh..eeeeee.....hhhhhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 4f0j A  22 SQAPVYGERLEGFDYAYPVHYLDFTSQGQPLSmAYLDVAPKKANGRTILLmHGKNFCAGTWERTIDVLADAGYRVIAVDQVGFCKSSKPAHYQYSFQQLAANTHALLERLGVARASVIGHSmGGmLATRYALLYPRQVERLVLVNPIGLEDWKALGVPWRSVDDWYRRDLQTSAEGIRQYQQATYYAGEWRPEFDRWVQmQAGmYRGKGRESVAWNSALTYDmIFTQPVVYELDRLQmPTLLLIGEKDNTAIGKDAAPAELKARLGNYAQLGKDAARRIPQATLVEFPDLGHTPQIQAPERFHQALLEGLQT 333
                                    31        41        51  |     61        71|       81        91       101       111       121       131       141 |  |  151       161       171       181       191       201       211       221   |   231       241  |    251       261       271       281       291       301       311       321       331  
                                                           54-MSE            72-MSE                                                                143-MSE                                                                       221-MSE                244-MSE        259-MSE                                                                      
                                                                                                                                                      146-MSE                                                                        225-MSE
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4F0J)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4F0J)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4F0J)

(-) Gene Ontology  (2, 2)

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