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(-) Description

Title :  THE CRYSTAL STRUCTURE OF CONJUGATIVE TRANSFER PAS_LIKE DOMAIN FROM SALMONELLA ENTERICA SUBSP. ENTERICA SEROVAR TYPHIMURIUM
 
Authors :  R. Wu, R. P. Jedrzejczak, R. N. Brown, J. R. Cort, F. Heffron, E. S. Nakaya J. N. Adkins, A. Joachimiak, Midwest Center For Structural Genom (Mcsg), Program For The Characterization Of Secreted Effecto Proteins (Pcsep)
Date :  26 Apr 12  (Deposition) - 12 Sep 12  (Release) - 12 Sep 12  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.67
Chains :  Asym. Unit :  A
Biol. Unit 1:  A  (2x)
Keywords :  Alpha-Beta-Alpha Structure, Structural Genomics, Midwest Center For Structural Genomics (Mcsg), Psi-Biology, Pas-Like Fold, Cytoplasmic, Transcription (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  R. Wu, R. P. Jedrzejczak, R. N. Brown, J. R. Cort, F. Heffron, E. S. Nakayasu, J. N. Adkins, A. Joachimiak
The Crystal Structure Of Conjugative Transfer Pas_like Domain From Salmonella Enterica Subsp. Enterica Serovar Typhimurium
To Be Published
PubMed: search

(-) Compounds

Molecule 1
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PMCSG7
    Expression System Strain: BL21 MAGIC
    Expression System Taxid: 511693
    Expression System Vector Type: PLASMID
    Fragment: CONJUGATIVE TRANSFER PAS_LIKE DOMAIN RESIDUES 5-128
    Gene: STM14_5595, TRAJ
    Organism Scientific: SALMONELLA ENTERICA SUBSP. ENTERICA SEROVAR TYPHIMURIUM STR. 14028S
    Organism Taxid: 588858
    Strain: 588858

 Structural Features

(-) Chains, Units

  1
Asymmetric Unit : A
Biological Unit 1 (2x): A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (7, 7)

Asymmetric Unit (7, 7)
No.NameCountTypeFull Name
1ACY1Ligand/IonACETIC ACID
2CL1Ligand/IonCHLORIDE ION
3GOL1Ligand/IonGLYCEROL
4MSE1Mod. Amino AcidSELENOMETHIONINE
5NA1Ligand/IonSODIUM ION
6PYR1Ligand/IonPYRUVIC ACID
7SIN1Ligand/IonSUCCINIC ACID
Biological Unit 1 (5, 10)
No.NameCountTypeFull Name
1ACY2Ligand/IonACETIC ACID
2CL-1Ligand/IonCHLORIDE ION
3GOL2Ligand/IonGLYCEROL
4MSE2Mod. Amino AcidSELENOMETHIONINE
5NA-1Ligand/IonSODIUM ION
6PYR2Ligand/IonPYRUVIC ACID
7SIN2Ligand/IonSUCCINIC ACID

(-) Sites  (6, 6)

Asymmetric Unit (6, 6)
No.NameEvidenceResiduesDescription
1AC1SOFTWARECYS A:92 , ARG A:94 , GLN A:103 , CL A:205 , HOH A:338 , HOH A:339BINDING SITE FOR RESIDUE SIN A 201
2AC2SOFTWAREPHE A:91 , ARG A:93 , PRO A:126BINDING SITE FOR RESIDUE ACY A 202
3AC3SOFTWAREPRO A:31 , GLY A:88 , ASN A:123 , LEU A:124 , HOH A:317BINDING SITE FOR RESIDUE PYR A 203
4AC4SOFTWARETYR A:45 , ALA A:46 , SER A:84 , LEU A:85 , GLY A:86BINDING SITE FOR RESIDUE NA A 204
5AC5SOFTWAREARG A:93 , ARG A:94 , SIN A:201 , HOH A:337 , HOH A:338BINDING SITE FOR RESIDUE CL A 205
6AC6SOFTWAREASN A:96BINDING SITE FOR RESIDUE GOL A 206

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4EW7)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 4EW7)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4EW7)

(-) PROSITE Motifs  (0, 0)

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(-) Exons   (0, 0)

(no "Exon" information available for 4EW7)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
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SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:113
                                                                                                                                                 
               SCOP domains ----------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhhhhhhhhh.....eeee.....eeeehhhhhhhh....hhhhh...hhhhhhhhhhhhhhhhhhhh...eeeeeeee..eeeeeeeeeee.....eeeeeeeee.. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------- Transcript
                 4ew7 A  14 QSVNKYILSIQDIYKNSPVPVCVRNQSRKIIYANGAFIELFSKEDQPLSGDSYNRYGVEVFLSSLELECQSLGHGAAFCRRFNFHGEIYQIRmENISFDNNEIIVLWQINLFP 126
                                    23        33        43        53        63        73        83        93       103  |    113       123   
                                                                                                                      106-MSE
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 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4EW7)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4EW7)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4EW7)

(-) Gene Ontology  (0, 0)

Asymmetric Unit(hide GO term definitions)
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