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(-) Description

Title :  CRYSTAL STRUCTURE OF THE NOVEL PHENAZINE PRENYLTRANSFERASE EPZP (WILDTYPE)
 
Authors :  G. Zocher, T. Stehle
Date :  28 Mar 12  (Deposition) - 14 Nov 12  (Release) - 14 Nov 12  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.93
Chains :  Asym./Biol. Unit :  A
Keywords :  Pt Fold, Dihydrophenazine Carboxylate Prenyltransferase, Transferase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  G. Zocher, O. Saleh, J. B. Heim, D. A. Herbst, L. Heide, T. Stehle
Structure-Based Engineering Increased The Catalytic Turnove Rate Of A Novel Phenazine Prenyltransferase.
Plos One V. 7 48427 2012
PubMed-ID: 23119011  |  Reference-DOI: 10.1371/JOURNAL.PONE.0048427

(-) Compounds

Molecule 1 - PRENYLTRANSFERASE
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Strain: ROSETTA 2
    Expression System Taxid: 562
    Gene: EPZP
    Organism Scientific: STREPTOMYCES CINNAMONENSIS
    Organism Taxid: 1900

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit : A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (4, 10)

Asymmetric/Biological Unit (4, 10)
No.NameCountTypeFull Name
1ACT1Ligand/IonACETATE ION
2CL1Ligand/IonCHLORIDE ION
3EPE1Ligand/Ion4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID
4SO47Ligand/IonSULFATE ION

(-) Sites  (10, 10)

Asymmetric Unit (10, 10)
No.NameEvidenceResiduesDescription
01AC1SOFTWAREARG A:49 , LYS A:117 , TRP A:119 , ASN A:172 , TYR A:174 , TYR A:220 , LYS A:283 , SO4 A:402 , HOH A:502 , HOH A:570 , HOH A:664 , HOH A:724BINDING SITE FOR RESIDUE SO4 A 401
02AC2SOFTWAREARG A:49 , SER A:55 , LYS A:117 , TYR A:281 , LYS A:283 , SO4 A:401 , HOH A:570 , HOH A:644BINDING SITE FOR RESIDUE SO4 A 402
03AC3SOFTWAREARG A:147 , ARG A:232 , THR A:276 , PRO A:277 , LYS A:278 , HOH A:681BINDING SITE FOR RESIDUE SO4 A 403
04AC4SOFTWARESER A:131 , GLU A:132 , LYS A:135 , HOH A:540 , HOH A:566BINDING SITE FOR RESIDUE SO4 A 404
05AC5SOFTWARETHR A:85 , ASP A:86 , ARG A:169 , HOH A:622BINDING SITE FOR RESIDUE SO4 A 405
06AC6SOFTWARESER A:227 , PRO A:228 , LYS A:229BINDING SITE FOR RESIDUE SO4 A 406
07AC7SOFTWAREGLN A:291 , LYS A:292 , HOH A:661BINDING SITE FOR RESIDUE SO4 A 407
08AC8SOFTWARELYS A:68BINDING SITE FOR RESIDUE CL A 408
09AC9SOFTWAREARG A:75 , HOH A:643BINDING SITE FOR RESIDUE ACT A 409
10BC1SOFTWAREGLU A:78 , GLU A:208 , LEU A:243 , LEU A:245 , VAL A:247 , ASP A:248 , HOH A:697BINDING SITE FOR RESIDUE EPE A 410

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4EE8)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 4EE8)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4EE8)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4EE8)

(-) Exons   (0, 0)

(no "Exon" information available for 4EE8)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:300
                                                                                                                                                                                                                                                                                                                                            
               SCOP domains d4ee8a_ A: automated matches                                                                                                                                                                                                                                                                                 SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author hhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhh..eeeeeee.hhhhhh.eeeeeee....hhhhhhhhh........hhhhhhhhhhhhh.eeeeeeeee...eeeeeeeee......hhhhhh......hhhhhhhhhhhhh.....eeeeeee....eeeeee........hhhhhhhhhhhhhhhhh.....hhhhhhhhh...eeeeeee.......eeeeeeee.hhhhh....hhhhhhhhhhh........eeeeeee....eeeeeeeeee.hhhhhhh..... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 4ee8 A   3 ESADLTELYSIIEKTAQVVDVTASHDKVWPILNAFQDVIADSVISFRASTGSSADDLDCRFTMLPKGLDPYARALEHGLTPKTDHPVGSLLKEVHENLPITSCGVDFGVAGGFTKTWSFPSAEKLGKVSELVKLPSIPDAVAANRDFFEKWGIADMVSTVGIDYSKRTMNLYFGGGVGDRVPAGVFEEKGVRAILGELGLAAPSEELLKFCERSFVIYVTLSWDSPKINRFTYSVMTPEPLGLPVDLAPTFERLIKSAPYDTEGRNYVYGIASTPKGEYHKIASYYQWQKRVEKLLRSDG 302
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302
   Legend:   → Mismatch (orange background)
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  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (1, 1)

Asymmetric/Biological Unit
(-)
Class: Alpha and beta proteins (a+b) (23004)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4EE8)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4EE8)

(-) Gene Ontology  (1, 1)

Asymmetric/Biological Unit(hide GO term definitions)

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/TrEMBL
        E5KWG9_STRCM | E5KWG9: 4ee6 4ee7

(-) Related Entries Specified in the PDB File

4ee6 4ee7