Chain A from PDB Type:PROTEIN Length:276
aligned with Q2EHL9_AGGAC | Q2EHL9 from UniProtKB/TrEMBL Length:394
Alignment length:344
43 53 63 73 83 93 103 113 123 133 143 153 163 173 183 193 203 213 223 233 243 253 263 273 283 293 303 313 323 333 343 353 363 373
Q2EHL9_AGGAC 34 TEEVKRGNIEKNVVATGSIESINTVDVGAQVSGKVTKLYVKLGQQVKKGDLIAEIDSTTQINTLNTRKAALASYQAQLVARKTAYDVALSNYNRLSKLYGQKATSLDTLNTAKATLNNAKAEMDVVQENIKQAEIEVNTAETNVGYTKITSPIDGTVISTPVSEGQTVNSNQTTPTIIKVADLSKMRIKPEISEGDITKVKAGQDVTFTILSDNKTVYHAKIDSVDPATTTISDNSSSNSSSSGSSSSSGSSSSAVYYYANIIVENPEHVLRIGMTTENNIKIADVQNVLFIPNLAVQKQQDKYVVNVLNGNTTQEREIEIGVQNDFQTEVKSGLTEGEKVVIS 377
SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .............eeeeeeee..eeee.................ee..........hhhhhhhhhhhhhhhhhhhhhh--------------hhh...........hhhhhhhhhh--------------hhhhhhhhhhhhhhhhhh......eee....................eeee....eeeee....hhhhh.....eeeee........eeee.............-------------------........eee...........eeeeee.................---------------------......................... Sec.struct. author
SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
4dk1 A 34 TEEVKRGNIEKNVVATGSIESINTVDVGAQVSGKITKLYVKLGQQVKKGDLLAEIDPATYEADYQSAQANLASTQEQA--------------QRYKLLVADQAVSKQQYADANAAY--------------LQSKAAVEQARINLRYTKITSPIDGTVISTPVSEGQTVNSNQTTPTIIKVADLSKmRIKPEISEGDITKVKAGQDVTFTILSDNKTVYHAKIDSVDPATTTISD-------------------SAVYYYANIIVENPEHVLRIGmTTENNIKIADVQNVLFIPNLAVQ---------------------EIGVQNDFQTEVKSGLTEGEKVVIS 332
43 53 63 73 83 93 103 | - - | 119 129 | - -| 145 155 165 175 185 | 195 205 215 225 235 | - - | 247 257 | 267 277 | - - 308 318 328
111 112 135 136 191-MSE 239 241 262-MSE 285 308
Chain B from PDB Type:PROTEIN Length:285
aligned with Q2EHL9_AGGAC | Q2EHL9 from UniProtKB/TrEMBL Length:394
Alignment length:344
43 53 63 73 83 93 103 113 123 133 143 153 163 173 183 193 203 213 223 233 243 253 263 273 283 293 303 313 323 333 343 353 363 373
Q2EHL9_AGGAC 34 TEEVKRGNIEKNVVATGSIESINTVDVGAQVSGKVTKLYVKLGQQVKKGDLIAEIDSTTQINTLNTRKAALASYQAQLVARKTAYDVALSNYNRLSKLYGQKATSLDTLNTAKATLNNAKAEMDVVQENIKQAEIEVNTAETNVGYTKITSPIDGTVISTPVSEGQTVNSNQTTPTIIKVADLSKMRIKPEISEGDITKVKAGQDVTFTILSDNKTVYHAKIDSVDPATTTISDNSSSNSSSSGSSSSSGSSSSAVYYYANIIVENPEHVLRIGMTTENNIKIADVQNVLFIPNLAVQKQQDKYVVNVLNGNTTQEREIEIGVQNDFQTEVKSGLTEGEKVVIS 377
SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .............eeeeeeee..eeee.................ee..........hhhhhhhhhhhhhhhhhhhhhh--------------hhh...........hhhhhhhhhh--------------hhhhhhhhhhhhhhhhhh......eee....................eeee....eeeee....hhhhh.....eeeee........eeee.............--------------------.......eee...........eeeeee.................--......---------....ee.........ee............ Sec.struct. author
SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
4dk1 B 34 TEEVKRGNIEKNVVATGSIESINTVDVGAQVSGKITKLYVKLGQQVKKGDLLAEIDPATYEADYQSAQANLASTQEQA--------------QRYKLLVADQAVSKQQYADANAAY--------------LQSKAAVEQARINLRYTKITSPIDGTVISTPVSEGQTVNSNQTTPTIIKVADLSKmRIKPEISEGDITKVKAGQDVTFTILSDNKTVYHAKIDSVDPATTTISD--------------------AVYYYANIIVENPEHVLRIGmTTENNIKIADVQNVLFIPNLAVQ--QDKYVV---------EREIEIGVQNDFQTEVKSGLTEGEKVVIS 332
43 53 63 73 83 93 103 | - - | 119 129 | - -| 145 155 165 175 185 | 195 205 215 225 235 | - - | 247 257 | 267 277 | -| | - | 308 318 328
111 112 135 136 191-MSE 239 242 262-MSE 285 | 293 304
288
Chain C from PDB Type:PROTEIN Length:278
aligned with Q2EHL9_AGGAC | Q2EHL9 from UniProtKB/TrEMBL Length:394
Alignment length:337
50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370
Q2EHL9_AGGAC 41 NIEKNVVATGSIESINTVDVGAQVSGKVTKLYVKLGQQVKKGDLIAEIDSTTQINTLNTRKAALASYQAQLVARKTAYDVALSNYNRLSKLYGQKATSLDTLNTAKATLNNAKAEMDVVQENIKQAEIEVNTAETNVGYTKITSPIDGTVISTPVSEGQTVNSNQTTPTIIKVADLSKMRIKPEISEGDITKVKAGQDVTFTILSDNKTVYHAKIDSVDPATTTISDNSSSNSSSSGSSSSSGSSSSAVYYYANIIVENPEHVLRIGMTTENNIKIADVQNVLFIPNLAVQKQQDKYVVNVLNGNTTQEREIEIGVQNDFQTEVKSGLTEGEKVVIS 377
SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ......eeeeeeee..eeee.................ee..........hhhhhhhhhhhhhhhhhhhhhh--------------hhh...........hhhhhhhhhh--------------hhhhhhhhhhhhhhhhhh......eee....................eeee....eeeee....hhhhh.....eeeee........eeee.............--------------------.......eee...........eeeeee.........ee......--......---------.............ee.............. Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
4dk1 C 41 NIEKNVVATGSIESINTVDVGAQVSGKITKLYVKLGQQVKKGDLLAEIDPATYEADYQSAQANLASTQEQA--------------QRYKLLVADQAVSKQQYADANAAY--------------LQSKAAVEQARINLRYTKITSPIDGTVISTPVSEGQTVNSNQTTPTIIKVADLSKmRIKPEISEGDITKVKAGQDVTFTILSDNKTVYHAKIDSVDPATTTISD--------------------AVYYYANIIVENPEHVLRIGmTTENNIKIADVQNVLFIPNLAVQ--QDKYVV---------EREIEIGVQNDFQTEVKSGLTEGEKVVIS 332
50 60 70 80 90 100 110| - | 116 126 |- - | 142 152 162 172 182 192 202 212 222 232 | - - 244 254 264 274 284| | |- 305 315 325
111 112 135 136 191-MSE 239 242 262-MSE 285 | 293 304
288
Chain D from PDB Type:PROTEIN Length:278
aligned with Q2EHL9_AGGAC | Q2EHL9 from UniProtKB/TrEMBL Length:394
Alignment length:340
43 53 63 73 83 93 103 113 123 133 143 153 163 173 183 193 203 213 223 233 243 253 263 273 283 293 303 313 323 333 343 353 363 373
Q2EHL9_AGGAC 34 TEEVKRGNIEKNVVATGSIESINTVDVGAQVSGKVTKLYVKLGQQVKKGDLIAEIDSTTQINTLNTRKAALASYQAQLVARKTAYDVALSNYNRLSKLYGQKATSLDTLNTAKATLNNAKAEMDVVQENIKQAEIEVNTAETNVGYTKITSPIDGTVISTPVSEGQTVNSNQTTPTIIKVADLSKMRIKPEISEGDITKVKAGQDVTFTILSDNKTVYHAKIDSVDPATTTISDNSSSNSSSSGSSSSSGSSSSAVYYYANIIVENPEHVLRIGMTTENNIKIADVQNVLFIPNLAVQKQQDKYVVNVLNGNTTQEREIEIGVQNDFQTEVKSGLTEGEK 373
SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .............eeeeeeee..eeee.................ee..........hhhhhhhhhhhhhhhhhhhhhh--------------hhh...........hhhhhhhhhh--------------hhhhhhhhhhhhhhhhhh......eee....................eeee....eeeee....hhhhh.....eeeee........eeee.............--------------------.......eee...........eeeeee.................--......------------...................... Sec.struct. author
SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
4dk1 D 34 TEEVKRGNIEKNVVATGSIESINTVDVGAQVSGKITKLYVKLGQQVKKGDLLAEIDPATYEADYQSAQANLASTQEQA--------------QRYKLLVADQAVSKQQYADANAAY--------------LQSKAAVEQARINLRYTKITSPIDGTVISTPVSEGQTVNSNQTTPTIIKVADLSKmRIKPEISEGDITKVKAGQDVTFTILSDNKTVYHAKIDSVDPATTTISD--------------------AVYYYANIIVENPEHVLRIGmTTENNIKIADVQNVLFIPNLAVQ--QDKYVV------------IEIGVQNDFQTEVKSGLTEGEK 328
43 53 63 73 83 93 103 | - - | 119 129 | - -| 145 155 165 175 185 | 195 205 215 225 235 | - - | 247 257 | 267 277 | -| | - 308 318 328
111 112 135 136 191-MSE 239 242 262-MSE 285 | 293 307
288
Legend: |
|
→ Mismatch |
(orange background) |
|
- |
→ Gap |
(green background, '-', border residues have a numbering label) |
|
|
→ Modified Residue |
(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name) |
|
x |
→ Chemical Group |
(purple background, 'x', labelled with number + name, e.g. ACE or NH2) |
|
extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|' |