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(-) Description

Title :  CRYSTAL STRUCTURE OF OCRL IN COMPLEX WITH A PHOSPHATE ION
 
Authors :  L. Tresaugues, M. Moche, C. H. Arrowsmith, H. Berglund, C. Bountra, A. M T. Ekblad, S. Flodin, S. Graslund, T. Karlberg, T. Nyman, H. Schuler, C. Silvander, A. G. Thorsell, J. Weigelt, M. Welin, P. Nordlund
Date :  16 Jan 14  (Deposition) - 16 Apr 14  (Release) - 21 May 14  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  3.13
Chains :  Asym./Biol. Unit :  A
Keywords :  Hydrolase, Inositol Signalling, Sgc Stockholm, Structural Genomics Consortium, Lowe Syndrome, Dent Disease (Keyword Search: [Gene Ontology, PubMed, Web (Google))
 
Reference :  L. Tresaugues, C. Silvander, S. Flodin, M. Welin, T. Nyman, S. Graslund, M. Hammarstrom, H. Berglund, P. Nordlund
Structural Basis For Phosphoinositide Substrate Recognition, Catalysis, And Membrane Interactions In Human Inositol Polyphosphate 5-Phosphatases.
Structure V. 22 744 2014
PubMed-ID: 24704254  |  Reference-DOI: 10.1016/J.STR.2014.01.013

(-) Compounds

Molecule 1 - INOSITOL POLYPHOSPHATE 5-PHOSPHATASE OCRL-1
    ChainsA
    EC Number3.1.3.36
    EngineeredYES
    Expression SystemESCHERICHIA COLI
    Expression System PlasmidPNIC-CH2
    Expression System StrainBL21(DE3)
    Expression System Taxid469008
    Expression System VariantR3 PRARE
    Expression System Vector TypePLASMID
    Fragment5-PHOSPHATASE CATALYTIC DOMAIN, RESIDUES 215-560
    MutationYES
    Organism CommonHUMAN
    Organism ScientificHOMO SAPIENS
    Organism Taxid9606
    Other DetailsMAMMALIAN GENE COLLECTION
    SynonymLOWE OCULOCEREBRORENAL SYNDROME PROTEIN, INOSITOL POLYPHOSPHATE 5-PHOSPHATASE OCRL-1 ISOFORM 1

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (3, 4)

Asymmetric/Biological Unit (3, 4)
No.NameCountTypeFull Name
1GOL2Ligand/IonGLYCEROL
2MG1Ligand/IonMAGNESIUM ION
3PO41Ligand/IonPHOSPHATE ION

(-) Sites  (4, 4)

Asymmetric Unit (4, 4)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREASN A:248 , GLU A:278 , TYR A:477 , ASP A:523 , HIS A:524 , MG A:1561 , HOH A:2002BINDING SITE FOR RESIDUE PO4 A1560
2AC2SOFTWAREASN A:250 , GLU A:278 , PO4 A:1560BINDING SITE FOR RESIDUE MG A1561
3AC3SOFTWARELYS A:229 , ASN A:354 , LYS A:355 , HIS A:379BINDING SITE FOR RESIDUE GOL A1562
4AC4SOFTWAREASN A:454 , ARG A:457 , THR A:458BINDING SITE FOR RESIDUE GOL A1563

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4CMN)

(-) Cis Peptide Bonds  (3, 3)

Asymmetric/Biological Unit
No.Residues
1Val A:401 -Pro A:402
2Val A:464 -Asp A:465
3Tyr A:477 -Lys A:478

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (37, 37)

Asymmetric/Biological Unit (37, 37)
  dbSNPPDB
No.SourceVariant IDVariantUniProt IDStatusIDChainVariant
01UniProtVAR_064773F242SOCRL_HUMANDisease (OCRL)137853828AF242S
02UniProtVAR_064774I274TOCRL_HUMANDisease (OCRL)137853829AI274T
03UniProtVAR_064775Q277ROCRL_HUMANDisease (OCRL)137853830AQ277R
04UniProtVAR_022698R318COCRL_HUMANDisease (OCRL)137853263AR318C
05UniProtVAR_064776R337COCRL_HUMANDisease (OCRL)137853831AR337C
06UniProtVAR_010169R337POCRL_HUMANDisease (OCRL)  ---AR337P
07UniProtVAR_064777N354HOCRL_HUMANDisease (DD2)137853833AN354H
08UniProtVAR_010170G357EOCRL_HUMANUnclassified (OCRL)137853854AG357E
09UniProtVAR_064778R361IOCRL_HUMANDisease (OCRL)137853832AR361I
10UniProtVAR_010172V372GOCRL_HUMANDisease (OCRL)137853834AV372G
11UniProtVAR_064779N373YOCRL_HUMANDisease (OCRL)137853835AN373Y
12UniProtVAR_064780S374FOCRL_HUMANDisease (OCRL)137853836AS374F
13UniProtVAR_010173H375YOCRL_HUMANDisease (OCRL)137853848AH375Y
14UniProtVAR_064781H414ROCRL_HUMANDisease (OCRL)137853837AH414R
15UniProtVAR_010174G421EOCRL_HUMANDisease (OCRL)137853855AG421E
16UniProtVAR_010175N424DOCRL_HUMANDisease (OCRL)137853856AN424D
17UniProtVAR_010176D451GOCRL_HUMANDisease (OCRL)137853850AD451G
18UniProtVAR_064782D451NOCRL_HUMANDisease (OCRL)137853838AD451N
19UniProtVAR_064783R457GOCRL_HUMANDisease (OCRL)137853839AR457G
20UniProtVAR_010177F463SOCRL_HUMANDisease (OCRL)137853851AF463S
21UniProtVAR_064784E468GOCRL_HUMANDisease (OCRL)137853841AE468G
22UniProtVAR_064785E468KOCRL_HUMANDisease (OCRL)137853840AE468K
23UniProtVAR_022699Y479COCRL_HUMANDisease (DD2)137853262AY479C
24UniProtVAR_064786R493WOCRL_HUMANDisease (DD2)137853846AR493W
25UniProtVAR_064787P495LOCRL_HUMANDisease (OCRL)  ---AP495L
26UniProtVAR_010178C498YOCRL_HUMANDisease (OCRL)137853857AC498Y
27UniProtVAR_064788D499HOCRL_HUMANDisease (OCRL)137853842AD499H
28UniProtVAR_010179R500GOCRL_HUMANDisease (OCRL)398123287AR500G
29UniProtVAR_010180R500QOCRL_HUMANDisease (OCRL)137853260AR500Q
30UniProtVAR_064789W503ROCRL_HUMANDisease (OCRL)137853843AW503R
31UniProtVAR_010181V508DOCRL_HUMANDisease (OCRL)137853849AV508D
32UniProtVAR_010182Y513COCRL_HUMANDisease (OCRL)137853847AY513C
33UniProtVAR_010183S522ROCRL_HUMANDisease (OCRL)137853853AS522R
34UniProtVAR_010184H524QOCRL_HUMANDisease (OCRL)137853261AH524Q
35UniProtVAR_010185H524ROCRL_HUMANDisease (OCRL)137853852AH524R
36UniProtVAR_023958P526LOCRL_HUMANDisease (OCRL)137853858AP526L
37UniProtVAR_010187I533SOCRL_HUMANDisease (OCRL)  ---AI533S

  SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4CMN)

(-) Exons   (9, 9)

Asymmetric/Biological Unit (9, 9)
 ENSEMBLUniProtKBPDB
No.Transcript IDExonExon IDGenome LocationLengthIDLocationLengthCountLocationLength
1.2aENST000003711132aENSE00001518494X:128674252-128674455204OCRL_HUMAN1-13130--
1.3aENST000003711133aENSE00001454376X:128674721-12867480080OCRL_HUMAN14-40270--
1.4ENST000003711134ENSE00001613852X:128678935-12867901480OCRL_HUMAN40-67280--
1.5aENST000003711135aENSE00001633886X:128682540-12868257839OCRL_HUMAN67-80140--
1.7ENST000003711137ENSE00000828196X:128691302-128691412111OCRL_HUMAN80-117380--
1.8ENST000003711138ENSE00000828195X:128691838-12869192790OCRL_HUMAN117-147310--
1.9ENST000003711139ENSE00000828194X:128692610-128692730121OCRL_HUMAN147-187410--
1.10bENST0000037111310bENSE00000828193X:128692817-128692978162OCRL_HUMAN187-241551A:219-24123
1.11ENST0000037111311ENSE00000828192X:128694527-128694628102OCRL_HUMAN241-275351A:241-27535
1.12ENST0000037111312ENSE00000828191X:128695156-128695270115OCRL_HUMAN275-313391A:275-31339
1.13ENST0000037111313ENSE00000828190X:128696361-128696477117OCRL_HUMAN314-352391A:314-35239
1.14ENST0000037111314ENSE00000828189X:128696576-128696763188OCRL_HUMAN353-415631A:353-415 (gaps)63
1.15ENST0000037111315ENSE00000828188X:128699749-128699860112OCRL_HUMAN415-452381A:415-45238
1.16aENST0000037111316aENSE00000828187X:128701231-128701340110OCRL_HUMAN453-489371A:453-48937
1.17ENST0000037111317ENSE00001795169X:128703241-128703376136OCRL_HUMAN489-534461A:489-53446
1.18ENST0000037111318ENSE00000828185X:128709117-128709227111OCRL_HUMAN535-571371A:535-55925
1.19ENST0000037111319ENSE00000828184X:128709874-128710039166OCRL_HUMAN572-627560--
1.20bENST0000037111320bENSE00000828183X:128710294-128710529236OCRL_HUMAN627-705790--
1.21ENST0000037111321ENSE00001454375X:128718321-12871834424OCRL_HUMAN706-71380--
1.23ENST0000037111323ENSE00000828182X:128720979-128721095117OCRL_HUMAN714-752390--
1.24ENST0000037111324ENSE00000828181X:128722156-12872224085OCRL_HUMAN753-781290--
1.25ENST0000037111325ENSE00000828180X:128722863-128722990128OCRL_HUMAN781-823430--
1.26bENST0000037111326bENSE00000828179X:128723822-128723933112OCRL_HUMAN824-861380--
1.27cENST0000037111327cENSE00001170507X:128724123-1287265382416OCRL_HUMAN861-901410--

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it)
Chain A from PDB  Type:PROTEIN  Length:339
 aligned with OCRL_HUMAN | Q01968 from UniProtKB/Swiss-Prot  Length:901

    Alignment length:341
                                   228       238       248       258       268       278       288       298       308       318       328       338       348       358       368       378       388       398       408       418       428       438       448       458       468       478       488       498       508       518       528       538       548       558 
           OCRL_HUMAN   219 REGLIKHILAKREKEYVNIQTFRFFVGTWNVNGQSPDSGLEPWLNCDPNPPDIYCIGFQELDLSTEAFFYFESVKEQEWSMAVERGLHSKAKYKKVQLVRLVGMMLLIFARKDQCRYIRDIATETVGTGIMGKMGNKGGVAVRFVFHNTTFCIVNSHLAAHVEDFERRNQDYKDICARMSFVVPNQTLPQLNIMKHEVVIWLGDLNYRLCMPDANEVKSLINKKDLQRLLKFDQLNIQRTQKKAFVDFNEGEIKFIPTYKYDSKTDRWDSSGKCRVPAWCDRILWRGTNVNQLNYRSHMELKTSDHKPVSALFHIGVKVVDERRYRKVFEDSVRIMDRMEN 559
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..hhhhhhhhhhhhh.eeeeeeeeeeeeee.........hhhhhh.......eeeeeee....hhhhhh...hhhhhhhhhhhhhhh.....eeeeeeeee..eeeeeeee.hhhh.eeeeeeeeee.hhhhh....eeeeeeeee..eeeeeeeee......hhhhhhhhhhhhhhhhee....--...ee.hhh.eeeeeee........hhhhhhhhhhh.hhhhhhh.hhhhhhhhh.......................................eeeeee...eee...ee...........eeeeeeeeeeeehhhhhhhhhhhhhhhhhhh.. Sec.struct. author
             SAPs(SNPs) (1) -----------------------S-------------------------------T--R----------------------------------------C------------------C----------------H--E---I----------GYFY--------------------------------------R------E--D--------------------------G-----G-----S----G----------C-------------W-L--YHG--R----D----C--------R-Q-L------S-------------------------- SAPs(SNPs) (1)
             SAPs(SNPs) (2) ----------------------------------------------------------------------------------------------------------------------P-----------------------------------------------------------------------------------------------------------------N----------------K-------------------------------Q-----------------------R----------------------------------- SAPs(SNPs) (2)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
           Transcript 1 (1) Exon 1.10b [INCOMPLETE]---------------------------------Exon 1.12  PDB: A:275-313              Exon 1.13  PDB: A:314-352              Exon 1.14  PDB: A:353-415 (gaps) UniProt: 353-415              -------------------------------------Exon 1.16a  PDB: A:453-489           ---------------------------------------------Exon 1.18  PDB: A:535-559 Transcript 1 (1)
           Transcript 1 (2) ----------------------Exon 1.11  PDB: A:241-275          -------------------------------------------------------------------------------------------------------------------------------------------Exon 1.15  PDB: A:415-452             ------------------------------------Exon 1.17  PDB: A:489-534 UniProt: 489-534    ------------------------- Transcript 1 (2)
                 4cmn A 219 REGLIKHILAKREKEYVNIQTFRFFVGTWNVNGQSPDSGLEPWLNCDPNPPDIYCIGFQELDLSTEAFFYFESVKEQEWSMAVERGLHSKAKYKKVQLVRLVGMMLLIFARKDQCRYIRDIATETVGTGIMGKMGNKGGVAVRFVFHNTTFCIVNSHLAAHVEDFERRNQDYKDICARMSFVVPN--LPQLNIMKHEVVIWLGDLNYRLGMPDANEVKSLINKKDLQRLLKFDQLNIQRTQKKAFVDFNEGEIKFIPTYKYDSKTDRWDSSGKCRVPAWCDRILWRGTNVNQLNYRSHMELKTSDHKPVSALFHIGVKVVDERRYRKVFEDSVRIMDRMEN 559
                                   228       238       248       258       268       278       288       298       308       318       328       338       348       358       368       378       388       398    |  408       418       428       438       448       458       468       478       488       498       508       518       528       538       548       558 
                                                                                                                                                                                                                  403  |                                                                                                                                                         
                                                                                                                                                                                                                     406                                                                                                                                                         

   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4CMN)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4CMN)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4CMN)

(-) Gene Ontology  (38, 38)

Asymmetric/Biological Unit(hide GO term definitions)
Chain A   (OCRL_HUMAN | Q01968)
molecular function
    GO:0005096    GTPase activator activity    Binds to and increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP.
    GO:0048365    Rac GTPase binding    Interacting selectively and non-covalently with Rac protein, any member of the Rac subfamily of the Ras superfamily of monomeric GTPases.
    GO:0016787    hydrolase activity    Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3.
    GO:0052745    inositol phosphate phosphatase activity    Catalysis of the reaction: inositol phosphate(n) + H2O = inositol phosphate(n-1) + phosphate. This reaction is the removal of a phosphate group from an inositol phosphate.
    GO:0052659    inositol-1,3,4,5-tetrakisphosphate 5-phosphatase activity    Catalysis of the reaction: 1D-myo-inositol 1,3,4,5-tetrakisphosphate + H2O = 1D-myo-inositol 1,3,4-trisphosphate + phosphate.
    GO:0052658    inositol-1,4,5-trisphosphate 5-phosphatase activity    Catalysis of the reaction: 1D-myo-inositol 1,4,5-trisphosphate + H2O = 1D-myo-inositol 1,4-bisphosphate + phosphate.
    GO:0004439    phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity    Catalysis of the reaction: 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate + H(2)O = 1-phosphatidyl-1D-myo-inositol 4-phosphate + phosphate.
    GO:0005515    protein binding    Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
biological process
    GO:0030030    cell projection organization    A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a prolongation or process extending from a cell, e.g. a flagellum or axon.
    GO:0001701    in utero embryonic development    The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth. An example of this process is found in Mus musculus.
    GO:0043647    inositol phosphate metabolic process    The chemical reactions and pathways involving inositol phosphate, 1,2,3,4,5,6-cyclohexanehexol, with one or more phosphate groups attached.
    GO:0006629    lipid metabolic process    The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids.
    GO:0006661    phosphatidylinositol biosynthetic process    The chemical reactions and pathways resulting in the formation of phosphatidylinositol, any glycophospholipid in which the sn-glycerol 3-phosphate residue is esterified to the 1-hydroxyl group of 1D-myo-inositol.
    GO:0046856    phosphatidylinositol dephosphorylation    The process of removing one or more phosphate groups from a phosphatidylinositol.
    GO:0043547    positive regulation of GTPase activity    Any process that activates or increases the activity of a GTPase.
    GO:0043087    regulation of GTPase activity    Any process that modulates the rate of GTP hydrolysis by a GTPase.
    GO:0051056    regulation of small GTPase mediated signal transduction    Any process that modulates the frequency, rate or extent of small GTPase mediated signal transduction.
    GO:0007165    signal transduction    The cellular process in which a signal is conveyed to trigger a change in the activity or state of a cell. Signal transduction begins with reception of a signal (e.g. a ligand binding to a receptor or receptor activation by a stimulus such as light), or for signal transduction in the absence of ligand, signal-withdrawal or the activity of a constitutively active receptor. Signal transduction ends with regulation of a downstream cellular process, e.g. regulation of transcription or regulation of a metabolic process. Signal transduction covers signaling from receptors located on the surface of the cell and signaling via molecules located within the cell. For signaling between cells, signal transduction is restricted to events at and within the receiving cell.
cellular component
    GO:0005794    Golgi apparatus    A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions.
    GO:0005795    Golgi stack    The set of thin, flattened membrane-bounded compartments, called cisternae, that form the central portion of the Golgi complex. The stack usually comprises cis, medial, and trans cisternae; the cis- and trans-Golgi networks are not considered part of the stack.
    GO:0005798    Golgi-associated vesicle    Any vesicle associated with the Golgi complex and involved in mediating transport within the Golgi or between the Golgi and other parts of the cell.
    GO:0042995    cell projection    A prolongation or process extending from a cell, e.g. a flagellum or axon.
    GO:0005929    cilium    A specialized eukaryotic organelle that consists of a filiform extrusion of the cell surface and of some cytoplasmic parts. Each cilium is largely bounded by an extrusion of the cytoplasmic (plasma) membrane, and contains a regular longitudinal array of microtubules, anchored to a basal body.
    GO:0005905    clathrin-coated pit    A part of the endomembrane system in the form of an invagination of a membrane upon which a clathrin coat forms, and that can be converted by vesicle budding into a clathrin-coated vesicle. Coated pits form on the plasma membrane, where they are involved in receptor-mediated selective transport of many proteins and other macromolecules across the cell membrane, in the trans-Golgi network, and on some endosomes.
    GO:0030136    clathrin-coated vesicle    A vesicle with a coat formed of clathrin connected to the membrane via one of the clathrin adaptor complexes.
    GO:0005737    cytoplasm    All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
    GO:0031410    cytoplasmic vesicle    A vesicle found in the cytoplasm of a cell.
    GO:0005829    cytosol    The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
    GO:0005769    early endosome    A membrane-bounded organelle that receives incoming material from primary endocytic vesicles that have been generated by clathrin-dependent and clathrin-independent endocytosis; vesicles fuse with the early endosome to deliver cargo for sorting into recycling or degradation pathways.
    GO:0031901    early endosome membrane    The lipid bilayer surrounding an early endosome.
    GO:0005768    endosome    A vacuole to which materials ingested by endocytosis are delivered.
    GO:0070062    extracellular exosome    A vesicle that is released into the extracellular region by fusion of the limiting endosomal membrane of a multivesicular body with the plasma membrane. Extracellular exosomes, also simply called exosomes, have a diameter of about 40-100 nm.
    GO:0016020    membrane    A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
    GO:0005634    nucleus    A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
    GO:0030670    phagocytic vesicle membrane    The lipid bilayer surrounding a phagocytic vesicle.
    GO:0001750    photoreceptor outer segment    The outer segment of a vertebrate photoreceptor that contains discs of photoreceptive membranes.
    GO:0005886    plasma membrane    The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins.
    GO:0005802    trans-Golgi network    The network of interconnected tubular and cisternal structures located within the Golgi apparatus on the side distal to the endoplasmic reticulum, from which secretory vesicles emerge. The trans-Golgi network is important in the later stages of protein secretion where it is thought to play a key role in the sorting and targeting of secreted proteins to the correct destination.

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

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        OCRL_HUMAN | Q019682kie 2qv2 3qbt 3qis

(-) Related Entries Specified in the PDB File

4cml CRYSTAL STRUCTURE OF INPP5B IN COMPLEX WITH PHOSPHATIDYLINOSITOL 3,4-BISPHOSPHATE