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(-) Description

Title :  STRUCTURAL BASIS OF SUBTILASE CYTOTOXIN SUBAB ASSEMBLY
 
Authors :  J. Le Nours, A. W. Paton, E. Byres, S. Troy, B. P. Herdman, M. D. Johnson, J. C. Paton, J. Rossjohn, T. Beddoe
Date :  02 Jul 13  (Deposition) - 14 Aug 13  (Release) - 09 Oct 13  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.60
Chains :  Asym. Unit :  A,B,C,D,E,F,G,H,I,J,K,L
Biol. Unit 1:  A,B,C,D,E,F  (1x)
Biol. Unit 2:  G,H,I,J,K,L  (1x)
Keywords :  Toxin, Ab5 Toxins, Disassembly, Cellular Trafficking (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  J. Le Nours, A. W. Paton, E. Byres, S. Troy, B. P. Herdman, M. D. Johnson J. C. Paton, J. Rossjohn, T. Beddoe
Structural Basis Of Subtilase Cytotoxin Subab Assembly.
J. Biol. Chem. V. 288 27505 2013
PubMed-ID: 23921389  |  Reference-DOI: 10.1074/JBC.M113.462622

(-) Compounds

Molecule 1 - SUBA
    Chains: A, G
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Strain: BL21(DE3)
    Expression System Taxid: 469008
    Expression System Vector: PET23
    Expression System Vector Type: PLASMID
    Organism Scientific: ESCHERICHIA COLI
    Organism Taxid: 670902
    Strain: 98NK2
 
Molecule 2 - SUBTILASE CYTOTOXIN, SUBUNIT B
    Chains: B, C, D, E, F, H, I, J, K, L
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Strain: BL21(DE3)
    Expression System Taxid: 469008
    Expression System Vector: PET23
    Expression System Vector Type: PLASMID
    Fragment: RESIDUES 24-141
    Organism Scientific: ESCHERICHIA COLI
    Organism Taxid: 670902
    Strain: 98NK2
    Synonym: SUBB

 Structural Features

(-) Chains, Units

  123456789101112
Asymmetric Unit : ABCDEFGHIJKL
Biological Unit 1 (1x): ABCDEF      
Biological Unit 2 (1x):       GHIJKL

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (2, 2)

Asymmetric Unit (2, 2)
No.NameCountTypeFull Name
1GOL1Ligand/IonGLYCEROL
2SO41Ligand/IonSULFATE ION
Biological Unit 1 (1, 1)
No.NameCountTypeFull Name
1GOL1Ligand/IonGLYCEROL
2SO4-1Ligand/IonSULFATE ION
Biological Unit 2 (1, 1)
No.NameCountTypeFull Name
1GOL-1Ligand/IonGLYCEROL
2SO41Ligand/IonSULFATE ION

(-) Sites  (2, 2)

Asymmetric Unit (2, 2)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREMET A:134 , MET A:169 , ASN A:172 , ASP A:174 , ARG A:175BINDING SITE FOR RESIDUE GOL A1344
2AC2SOFTWAREGLY G:235 , GLY G:236 , ILE G:237 , THR G:238BINDING SITE FOR RESIDUE SO4 G1343

(-) SS Bonds  (15, 15)

Asymmetric Unit
No.Residues
1A:288 -A:331
2B:103 -B:109
3C:103 -C:109
4D:31 -D:45
5D:103 -D:109
6E:31 -E:45
7E:103 -E:109
8F:31 -F:45
9F:103 -F:109
10G:288 -G:331
11H:103 -H:109
12I:103 -I:109
13J:103 -J:109
14K:103 -K:109
15L:103 -L:109

(-) Cis Peptide Bonds  (14, 14)

Asymmetric Unit
No.Residues
1Ile A:118 -Pro A:119
2Trp A:198 -Pro A:199
3Ser B:51 -Val B:52
4Gly C:39 -Ser C:40
5Ser C:51 -Val C:52
6Ser E:51 -Val E:52
7Ser F:51 -Val F:52
8Ile G:118 -Pro G:119
9Trp G:198 -Pro G:199
10Ser H:51 -Val H:52
11Ser I:51 -Val I:52
12Ser J:51 -Val J:52
13Ser K:51 -Val K:52
14Ser L:51 -Val L:52

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4BWG)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4BWG)

(-) Exons   (0, 0)

(no "Exon" information available for 4BWG)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:321
 aligned with Q6EZC2_ECOLX | Q6EZC2 from UniProtKB/TrEMBL  Length:347

    Alignment length:321
                                    32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302       312       322       332       342 
         Q6EZC2_ECOLX    23 KPWYFDAIGLTETTMSLTDKNTPVVVSVVDSGVAFIGGLSDSEFAKFSFTQDGSPFPVKKSEALYIHGTAMASLIASRYGIYGVYPHALISSRRVIPDGVQDSWIRAIESIMSNVFLAPGEEKIINISGGQKGVASASVWTELLSRMGRNNDRLIVAAVGNDGADIRKLSAQQRIWPAAYHPVSSVNKKQDPVIRVAALAQYRKGETPVLHGGGITGSRFGNNWVDIAAPGQNITFLRPDAKTGTGSGTSEATAIVSGVLAAMTSCNPRATATELKRTLLESADKYPSLVDKVTEGRVLNAEKAISMFCKKNYIPVRQGRM 343
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..hhhhhhh.hhhhhh........eeeeee.....hhhhh..eeeeee............hhhhhhhhhhhhhhhhh...........eeeeee.......hhhhhhhhhhh........eeeeeee.........hhhhhhhhhhhhhhh..eeeee.......hhhhhhhhh.........hhhhhhh..eeeeeee...........................eeee...eeee.....eeee.hhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhh.ee.hhhh..hhh.ee.hhhhhhhhhhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4bwg A  23 KPWYFDAIGLTETTMSLTDKNTPVVVSVVDSGVAFIGGLSDSEFAKFSFTQDGSPFPVKKSEALYIHGTAMASLIASRYGIYGVYPHALISSRRVIPDGVQDSWIRAIESIMSNVFLAPGEEKIINISGGQKGVASASVWTELLSRMGRNNDRLIVAAVGNDGADIRKLSAQQRIWPAAYHPVSSVNKKQDPVIRVAALAQYRKGETPVLHGGGITGSRFGNNWVDIAAPGQNITFLRPDAKTGTGSGTSEATAIVSGVLAAMTSCNPRATATELKRTLLESADKYPSLVDKVTEGRVLNAEKAISMFCKKNYIPVRQGRM 343
                                    32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302       312       322       332       342 


Chain B from PDB  Type:PROTEIN  Length:96
 aligned with Q3ZTX8_ECOLX | Q3ZTX8 from UniProtKB/TrEMBL  Length:141

    Alignment length:100
                                    46        56        66        76        86        96       106       116       126       136
         Q3ZTX8_ECOLX    37 VVITQFHTGQIDNKPYFCIEGKQSAGSSISACSMKNSSVWGASFSTLYNQALYFYTTGQPVRIYYEPGVWTYPPFVKALTSNALVGLSTCTTSTECFGPD 136
               SCOP domains ---------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeeeeeee..eeeeeeeee----..eeeeee.....hhhhhhhhhhhhhhhhhhh..eeeeee.....hhhhhhhh...eeeeeee........... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------- Transcript
                 4bwg B  14 VVITQFHTGQIDNKPYFCIEGK----SSISACSMKNSSVWGASFSTLYNQALYFYTTGQPVRIYYEPGVWTYPPFVKALTSNALVGLSTCTTSTECFGPD 113
                                    23        33 |    | 43        53        63        73        83        93       103       113
                                                35   40                                                                         


Chain C from PDB  Type:PROTEIN  Length:114
 aligned with Q3ZTX8_ECOLX | Q3ZTX8 from UniProtKB/TrEMBL  Length:141

    Alignment length:114
                                    33        43        53        63        73        83        93       103       113       123       133    
         Q3ZTX8_ECOLX    24 EWTGDARDGMFSGVVITQFHTGQIDNKPYFCIEGKQSAGSSISACSMKNSSVWGASFSTLYNQALYFYTTGQPVRIYYEPGVWTYPPFVKALTSNALVGLSTCTTSTECFGPDR 137
               SCOP domains ------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ....................................................hhhhhhhhhhhhhhhhhhh.............hhhhhhhh...................... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------ Transcript
                 4bwg C   1 EWTGDARDGMFSGVVITQFHTGQIDNKPYFCIEGKQSAGSSISACSMKNSSVWGASFSTLYNQALYFYTTGQPVRIYYEPGVWTYPPFVKALTSNALVGLSTCTTSTECFGPDR 114
                                    10        20        30        40        50        60        70        80        90       100       110    


Chain D from PDB  Type:PROTEIN  Length:98
 aligned with Q3ZTX8_ECOLX | Q3ZTX8 from UniProtKB/TrEMBL  Length:141

    Alignment length:102
                                    44        54        64        74        84        94       104       114       124       134  
         Q3ZTX8_ECOLX    35 SGVVITQFHTGQIDNKPYFCIEGKQSAGSSISACSMKNSSVWGASFSTLYNQALYFYTTGQPVRIYYEPGVWTYPPFVKALTSNALVGLSTCTTSTECFGPD 136
               SCOP domains ------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ..eeeeeeeeeee...........----...........hhhhhhhhhhhhhhhhhhhhh.eeeeeee.....hhhhhhhh...eeeeeee........... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------ Transcript
                 4bwg D  12 SGVVITQFHTGQIDNKPYFCIEGK----SSISACSMKNSSVWGASFSTLYNQALYFYTTGQPVRIYYEPGVWTYPPFVKALTSNALVGLSTCTTSTECFGPD 113
                                    21        31   |    41        51        61        71        81        91       101       111  
                                                  35   40                                                                         


Chain E from PDB  Type:PROTEIN  Length:107
 aligned with Q3ZTX8_ECOLX | Q3ZTX8 from UniProtKB/TrEMBL  Length:141

    Alignment length:114
                                    33        43        53        63        73        83        93       103       113       123       133    
         Q3ZTX8_ECOLX    24 EWTGDARDGMFSGVVITQFHTGQIDNKPYFCIEGKQSAGSSISACSMKNSSVWGASFSTLYNQALYFYTTGQPVRIYYEPGVWTYPPFVKALTSNALVGLSTCTTSTECFGPDR 137
               SCOP domains ------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .................................-------............hhhhhhhhhhhhhhhhhhh.............hhhhhhhh...................... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------ Transcript
                 4bwg E   1 EWTGDARDGMFSGVVITQFHTGQIDNKPYFCIE-------SISACSMKNSSVWGASFSTLYNQALYFYTTGQPVRIYYEPGVWTYPPFVKALTSNALVGLSTCTTSTECFGPDR 114
                                    10        20        30  |      -|       50        60        70        80        90       100       110    
                                                           33      41                                                                         


Chain F from PDB  Type:PROTEIN  Length:109
 aligned with Q3ZTX8_ECOLX | Q3ZTX8 from UniProtKB/TrEMBL  Length:141

    Alignment length:113
                                    33        43        53        63        73        83        93       103       113       123       133   
         Q3ZTX8_ECOLX    24 EWTGDARDGMFSGVVITQFHTGQIDNKPYFCIEGKQSAGSSISACSMKNSSVWGASFSTLYNQALYFYTTGQPVRIYYEPGVWTYPPFVKALTSNALVGLSTCTTSTECFGPD 136
               SCOP domains ----------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ........eeeeeeeeeeeeeeee..eeeeeeeee----..eeeeee.....hhhhhhhhhhhhhhhhhhh.............hhhhhhhh...eeeeeee........... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------- Transcript
                 4bwg F   1 EWTGDARDGMFSGVVITQFHTGQIDNKPYFCIEGK----SSISACSMKNSSVWGASFSTLYNQALYFYTTGQPVRIYYEPGVWTYPPFVKALTSNALVGLSTCTTSTECFGPD 113
                                    10        20        30    |   40        50        60        70        80        90       100       110   
                                                             35   40                                                                         


Chain G from PDB  Type:PROTEIN  Length:320
 aligned with Q6EZC2_ECOLX | Q6EZC2 from UniProtKB/TrEMBL  Length:347

    Alignment length:320
                                    32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302       312       322       332       342
         Q6EZC2_ECOLX    23 KPWYFDAIGLTETTMSLTDKNTPVVVSVVDSGVAFIGGLSDSEFAKFSFTQDGSPFPVKKSEALYIHGTAMASLIASRYGIYGVYPHALISSRRVIPDGVQDSWIRAIESIMSNVFLAPGEEKIINISGGQKGVASASVWTELLSRMGRNNDRLIVAAVGNDGADIRKLSAQQRIWPAAYHPVSSVNKKQDPVIRVAALAQYRKGETPVLHGGGITGSRFGNNWVDIAAPGQNITFLRPDAKTGTGSGTSEATAIVSGVLAAMTSCNPRATATELKRTLLESADKYPSLVDKVTEGRVLNAEKAISMFCKKNYIPVRQGR 342
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..hhhhhhh.hhhhhh........eeeeee.....hhhhh..eeeeee............hhhhhhhhhhhhhhhhh...........eeeeee.......hhhhhhhhhhh........eeeeeee.........hhhhhhhhhhhhhhh..eeeee.......hhhhhhhhh.........hhhhhhhh.eeeeeee...........................eeee...eeee.....eeee.hhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhh.ee.hhhh..hhh.ee.hhhhhhhhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4bwg G  23 KPWYFDAIGLTETTMSLTDKNTPVVVSVVDSGVAFIGGLSDSEFAKFSFTQDGSPFPVKKSEALYIHGTAMASLIASRYGIYGVYPHALISSRRVIPDGVQDSWIRAIESIMSNVFLAPGEEKIINISGGQKGVASASVWTELLSRMGRNNDRLIVAAVGNDGADIRKLSAQQRIWPAAYHPVSSVNKKQDPVIRVAALAQYRKGETPVLHGGGITGSRFGNNWVDIAAPGQNITFLRPDAKTGTGSGTSEATAIVSGVLAAMTSCNPRATATELKRTLLESADKYPSLVDKVTEGRVLNAEKAISMFCKKNYIPVRQGR 342
                                    32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302       312       322       332       342


Chain H from PDB  Type:PROTEIN  Length:107
 aligned with Q3ZTX8_ECOLX | Q3ZTX8 from UniProtKB/TrEMBL  Length:141

    Alignment length:112
                                    34        44        54        64        74        84        94       104       114       124       134  
         Q3ZTX8_ECOLX    25 WTGDARDGMFSGVVITQFHTGQIDNKPYFCIEGKQSAGSSISACSMKNSSVWGASFSTLYNQALYFYTTGQPVRIYYEPGVWTYPPFVKALTSNALVGLSTCTTSTECFGPD 136
               SCOP domains ---------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .......eeeeeeeeeeeeeeee..eeeeeeeee-----.eeeeee.....hhhhhhhhhhhhhhhhhhh.............hhhhhhhh...eeeeeee........... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------- Transcript
                 4bwg H   2 WTGDARDGMFSGVVITQFHTGQIDNKPYFCIEGK-----SISACSMKNSSVWGASFSTLYNQALYFYTTGQPVRIYYEPGVWTYPPFVKALTSNALVGLSTCTTSTECFGPD 113
                                    11        21        31   |    41        51        61        71        81        91       101       111  
                                                            35    41                                                                        


Chain I from PDB  Type:PROTEIN  Length:109
 aligned with Q3ZTX8_ECOLX | Q3ZTX8 from UniProtKB/TrEMBL  Length:141

    Alignment length:113
                                    33        43        53        63        73        83        93       103       113       123       133   
         Q3ZTX8_ECOLX    24 EWTGDARDGMFSGVVITQFHTGQIDNKPYFCIEGKQSAGSSISACSMKNSSVWGASFSTLYNQALYFYTTGQPVRIYYEPGVWTYPPFVKALTSNALVGLSTCTTSTECFGPD 136
               SCOP domains ----------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....................................----............hhhhhhhhhhhhhhhhhhh.............hhhhhhhh..................... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------- Transcript
                 4bwg I   1 EWTGDARDGMFSGVVITQFHTGQIDNKPYFCIEGKQ----SISACSMKNSSVWGASFSTLYNQALYFYTTGQPVRIYYEPGVWTYPPFVKALTSNALVGLSTCTTSTECFGPD 113
                                    10        20        30     |   -|       50        60        70        80        90       100       110   
                                                              36   41                                                                        


Chain J from PDB  Type:PROTEIN  Length:91
 aligned with Q3ZTX8_ECOLX | Q3ZTX8 from UniProtKB/TrEMBL  Length:141

    Alignment length:100
                                    46        56        66        76        86        96       106       116       126       136
         Q3ZTX8_ECOLX    37 VVITQFHTGQIDNKPYFCIEGKQSAGSSISACSMKNSSVWGASFSTLYNQALYFYTTGQPVRIYYEPGVWTYPPFVKALTSNALVGLSTCTTSTECFGPD 136
               SCOP domains ---------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....eeeeee....eeeeee---------.eeee.....hhhhhhhhhhhhhhhhhhh..eeeeee.....hhhhhhhh...eeeeeee........... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------- Transcript
                 4bwg J  14 VVITQFHTGQIDNKPYFCIE---------SACSMKNSSVWGASFSTLYNQALYFYTTGQPVRIYYEPGVWTYPPFVKALTSNALVGLSTCTTSTECFGPD 113
                                    23        33        43        53        63        73        83        93       103       113
                                              33        43                                                                      


Chain K from PDB  Type:PROTEIN  Length:100
 aligned with Q3ZTX8_ECOLX | Q3ZTX8 from UniProtKB/TrEMBL  Length:141

    Alignment length:102
                                    44        54        64        74        84        94       104       114       124       134  
         Q3ZTX8_ECOLX    35 SGVVITQFHTGQIDNKPYFCIEGKQSAGSSISACSMKNSSVWGASFSTLYNQALYFYTTGQPVRIYYEPGVWTYPPFVKALTSNALVGLSTCTTSTECFGPD 136
               SCOP domains ------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ...eeeeeeeeee..eeeeeeeee.--..eeeeeee........hhhhhhhhhhhhhhhh.............hhhhhhhh..................... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------ Transcript
                 4bwg K  12 SGVVITQFHTGQIDNKPYFCIEGKQ--GSSISACSMKNSSVWGASFSTLYNQALYFYTTGQPVRIYYEPGVWTYPPFVKALTSNALVGLSTCTTSTECFGPD 113
                                    21        31    |  |41        51        61        71        81        91       101       111  
                                                   36 39                                                                          


Chain L from PDB  Type:PROTEIN  Length:107
 aligned with Q3ZTX8_ECOLX | Q3ZTX8 from UniProtKB/TrEMBL  Length:141

    Alignment length:112
                                    34        44        54        64        74        84        94       104       114       124       134  
         Q3ZTX8_ECOLX    25 WTGDARDGMFSGVVITQFHTGQIDNKPYFCIEGKQSAGSSISACSMKNSSVWGASFSTLYNQALYFYTTGQPVRIYYEPGVWTYPPFVKALTSNALVGLSTCTTSTECFGPD 136
               SCOP domains ---------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..................................-----...............hhhhhhhhhhhhhhhh.............hhhhhhhh..................... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------- Transcript
                 4bwg L   2 WTGDARDGMFSGVVITQFHTGQIDNKPYFCIEGK-----SISACSMKNSSVWGASFSTLYNQALYFYTTGQPVRIYYEPGVWTYPPFVKALTSNALVGLSTCTTSTECFGPD 113
                                    11        21        31   |    41        51        61        71        81        91       101       111  
                                                            35    41
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4BWG)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4BWG)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4BWG)

(-) Gene Ontology  (3, 3)

Asymmetric Unit(hide GO term definitions)
Chain A,G   (Q6EZC2_ECOLX | Q6EZC2)
molecular function
    GO:0004252    serine-type endopeptidase activity    Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine).
biological process
    GO:0006508    proteolysis    The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds.

Chain B,C,D,E,F,H,I,J,K,L   (Q3ZTX8_ECOLX | Q3ZTX8)
biological process
    GO:0009405    pathogenesis    The set of specific processes that generate the ability of an organism to induce an abnormal, generally detrimental state in another organism.

 Visualization

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Asymmetric Unit
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  Cis Peptide Bonds
    Gly C:39 - Ser C:40   [ RasMol ]  
    Ile A:118 - Pro A:119   [ RasMol ]  
    Ile G:118 - Pro G:119   [ RasMol ]  
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  4bwg
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  Q3ZTX8_ECOLX | Q3ZTX8
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  Q6EZC2_ECOLX | Q6EZC2
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/TrEMBL
        Q3ZTX8_ECOLX | Q3ZTX8: 3dwa 3dwp 3dwq
        Q6EZC2_ECOLX | Q6EZC2: 2iy9

(-) Related Entries Specified in the PDB File

(no "Related Entries Specified in the PDB File" available for 4BWG)