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(-) Description

Title :  MONOMERIC HUMAN CU,ZN SUPEROXIDE DISMUTASE, LOOPS IV AND VII DELETED, APO FORM.
 
Authors :  K. Saraboji, W. Awad, J. Danielsson, L. Lang, M. Kurnik, S. L. Marklund, M. Oliveberg, D. T. Logan
Date :  03 Oct 12  (Deposition) - 27 Feb 13  (Release) - 20 Mar 13  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.93
Chains :  Asym. Unit :  A,B
Biol. Unit 1:  A  (1x)
Biol. Unit 2:  B  (1x)
Keywords :  Oxidoreductase, Cu/Zn Sod1, Monomeric Mutant, Disease Mutation, Metal Binding, Neurodegeneration, Als (Keyword Search: [Gene Ontology, PubMed, Web (Google))
 
Reference :  J. Danielsson, W. Awad, K. Saraboji, M. Kurnik, L. Lang, L. Leinartaite, S. L. Marklund, D. T. Logan, M. Oliveberg
Global Structural Motions From The Strain Of A Single Hydrogen Bond.
Proc. Natl. Acad. Sci. Usa V. 110 3829 2013
PubMed-ID: 23431167  |  Reference-DOI: 10.1073/PNAS.1217306110

(-) Compounds

Molecule 1 - SUPEROXIDE DISMUTASE [CU-ZN]
    ChainsA, B
    EC Number1.15.1.1
    EngineeredYES
    Expression SystemESCHERICHIA COLI
    Expression System StrainBL21(DE3)
    Expression System Taxid469008
    FragmentRESIDUES 2049,83-124,141-154
    MutationYES
    Organism CommonHUMAN
    Organism ScientificHOMO SAPIENS
    Organism Taxid9606
    SynonymSUPEROXIDE DISMUTASE 1, HSOD1

 Structural Features

(-) Chains, Units

  12
Asymmetric Unit AB
Biological Unit 1 (1x)A 
Biological Unit 2 (1x) B

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 4BCZ)

(-) Sites  (0, 0)

(no "Site" information available for 4BCZ)

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4BCZ)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 4BCZ)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (66, 132)

Asymmetric Unit (66, 132)
  dbSNPPDB
No.SourceVariant IDVariantUniProt IDStatusIDChainVariant
01UniProtVAR_013518A5SSODC_HUMANDisease (ALS1)  ---A/BA4S
02UniProtVAR_007130A5TSODC_HUMANDisease (ALS1)121912444A/BA4T
03UniProtVAR_007131A5VSODC_HUMANDisease (ALS1)121912442A/BA4V
04UniProtVAR_008717C7FSODC_HUMANDisease (ALS1)121912448A/BA6F
05UniProtVAR_007132V8ESODC_HUMANDisease (ALS1)  ---A/BV7E
06UniProtVAR_013519L9QSODC_HUMANDisease (ALS1)  ---A/BL8Q
07UniProtVAR_013520L9VSODC_HUMANDisease (ALS1)  ---A/BL8V
08UniProtVAR_013521G13RSODC_HUMANDisease (ALS1)121912456A/BG12R
09UniProtVAR_013522V15GSODC_HUMANDisease (ALS1)  ---A/BV14G
10UniProtVAR_007133V15MSODC_HUMANDisease (ALS1)  ---A/BV14M
11UniProtVAR_007134G17SSODC_HUMANDisease (ALS1)121912453A/BG16S
12UniProtVAR_045876F21CSODC_HUMANDisease (ALS1)  ---A/BF20C
13UniProtVAR_013523E22GSODC_HUMANDisease (ALS1)  ---A/BE21G
14UniProtVAR_007135E22KSODC_HUMANDisease (ALS1)121912450A/BE21K
15UniProtVAR_045877Q23LSODC_HUMANDisease (ALS1)  ---A/BQ22L
16UniProtVAR_007136G38RSODC_HUMANDisease (ALS1)121912431A/BG37R
17UniProtVAR_013524L39RSODC_HUMANDisease (ALS1)  ---A/BL38R
18UniProtVAR_007137L39VSODC_HUMANDisease (ALS1)121912432A/BL38V
19UniProtVAR_007139G42DSODC_HUMANDisease (ALS1)121912434A/BG41D
20UniProtVAR_007138G42SSODC_HUMANDisease (ALS1)121912433A/BG41S
21UniProtVAR_007140H44RSODC_HUMANDisease (ALS1)121912435A/BH43R
22UniProtVAR_013525F46CSODC_HUMANDisease (ALS1)121912457A/BF45C
23UniProtVAR_007141H47RSODC_HUMANDisease (ALS1)121912443A/BH46R
24UniProtVAR_007142H49QSODC_HUMANDisease (ALS1)  ---A/BH48Q
25UniProtVAR_045878H49RSODC_HUMANDisease (ALS1)  ---A/BH48R
26UniProtVAR_013526E50KSODC_HUMANDisease (ALS1)  ---A/BG49K
27UniProtVAR_013530L85FSODC_HUMANDisease (ALS1)  ---A/BL54F
28UniProtVAR_007143L85VSODC_HUMANDisease (ALS1)121912452A/BL54V
29UniProtVAR_007144G86RSODC_HUMANDisease (ALS1)121912436A/BG55R
30UniProtVAR_013531N87SSODC_HUMANDisease (ALS1)11556620A/BN56S
31UniProtVAR_045880V88ASODC_HUMANDisease (ALS1)  ---A/BV57A
32UniProtVAR_045881A90TSODC_HUMANDisease (ALS1)  ---A/BA59T
33UniProtVAR_013532A90VSODC_HUMANDisease (ALS1)  ---A/BA59V
34UniProtVAR_007145D91ASODC_HUMANDisease (ALS1)80265967A/BD60A
35UniProtVAR_013533D91VSODC_HUMANDisease (ALS1)  ---A/BD60V
36UniProtVAR_007146G94ASODC_HUMANDisease (ALS1)121912438A/BG63A
37UniProtVAR_007147G94CSODC_HUMANDisease (ALS1)121912437A/BG63C
38UniProtVAR_007148G94DSODC_HUMANDisease (ALS1)  ---A/BG63D
39UniProtVAR_007149G94RSODC_HUMANDisease (ALS1)121912437A/BG63R
40UniProtVAR_008719G94VSODC_HUMANDisease (ALS1)  ---A/BG63V
41UniProtVAR_065194A96GSODC_HUMANDisease (ALS1)  ---A/BA65G
42UniProtVAR_045882V98MSODC_HUMANDisease (ALS1)  ---A/BV67M
43UniProtVAR_007150E101GSODC_HUMANDisease (ALS1)121912439A/BE70G
44UniProtVAR_013534E101KSODC_HUMANDisease (ALS1)  ---A/BE70K
45UniProtVAR_007151D102GSODC_HUMANDisease (ALS1)  ---A/BD71G
46UniProtVAR_007152D102NSODC_HUMANDisease (ALS1)  ---A/BD71N
47UniProtVAR_008720I105FSODC_HUMANDisease (ALS1)121912445A/BI74F
48UniProtVAR_013535S106LSODC_HUMANDisease (ALS1)  ---A/BS75L
49UniProtVAR_007153L107VSODC_HUMANDisease (ALS1)121912440A/BL76V
50UniProtVAR_013536G109VSODC_HUMANDisease (ALS1)  ---A/BG78V
51UniProtVAR_077327C112YSODC_HUMANDisease (ALS1)  ---A/BS81Y
52UniProtVAR_013537I113MSODC_HUMANDisease (ALS1)  ---A/BI82M
53UniProtVAR_007154I113TSODC_HUMANDisease (ALS1)74315452A/BI82T
54UniProtVAR_007155I114TSODC_HUMANDisease (ALS1)121912441A/BI83T
55UniProtVAR_013538G115ASODC_HUMANDisease (ALS1)  ---A/BG84A
56UniProtVAR_007156R116GSODC_HUMANDisease (ALS1)  ---A/BR85G
57UniProtVAR_045883V119LSODC_HUMANDisease (ALS1)  ---A/BV88L
58UniProtVAR_007160L145FSODC_HUMANDisease (ALS1)  ---A/BL101F
59UniProtVAR_008724L145SSODC_HUMANDisease (ALS1)121912446A/BL101S
60UniProtVAR_008725A146TSODC_HUMANDisease (ALS1)121912447A/BA102T
61UniProtVAR_013540C147RSODC_HUMANDisease (ALS1)  ---A/BS103R
62UniProtVAR_045885G148RSODC_HUMANDisease (ALS1)  ---A/BG104R
63UniProtVAR_007161V149GSODC_HUMANDisease (ALS1)  ---A/BV105G
64UniProtVAR_007162V149ISODC_HUMANDisease (ALS1)567511139A/BV105I
65UniProtVAR_007163I150TSODC_HUMANDisease (ALS1)  ---A/BI106T
66UniProtVAR_007164I152TSODC_HUMANDisease (ALS1)121912449A/BI108T

  SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)
Biological Unit 1 (66, 66)
  dbSNPPDB
No.SourceVariant IDVariantUniProt IDStatusIDChainVariant
01UniProtVAR_013518A5SSODC_HUMANDisease (ALS1)  ---AA4S
02UniProtVAR_007130A5TSODC_HUMANDisease (ALS1)121912444AA4T
03UniProtVAR_007131A5VSODC_HUMANDisease (ALS1)121912442AA4V
04UniProtVAR_008717C7FSODC_HUMANDisease (ALS1)121912448AA6F
05UniProtVAR_007132V8ESODC_HUMANDisease (ALS1)  ---AV7E
06UniProtVAR_013519L9QSODC_HUMANDisease (ALS1)  ---AL8Q
07UniProtVAR_013520L9VSODC_HUMANDisease (ALS1)  ---AL8V
08UniProtVAR_013521G13RSODC_HUMANDisease (ALS1)121912456AG12R
09UniProtVAR_013522V15GSODC_HUMANDisease (ALS1)  ---AV14G
10UniProtVAR_007133V15MSODC_HUMANDisease (ALS1)  ---AV14M
11UniProtVAR_007134G17SSODC_HUMANDisease (ALS1)121912453AG16S
12UniProtVAR_045876F21CSODC_HUMANDisease (ALS1)  ---AF20C
13UniProtVAR_013523E22GSODC_HUMANDisease (ALS1)  ---AE21G
14UniProtVAR_007135E22KSODC_HUMANDisease (ALS1)121912450AE21K
15UniProtVAR_045877Q23LSODC_HUMANDisease (ALS1)  ---AQ22L
16UniProtVAR_007136G38RSODC_HUMANDisease (ALS1)121912431AG37R
17UniProtVAR_013524L39RSODC_HUMANDisease (ALS1)  ---AL38R
18UniProtVAR_007137L39VSODC_HUMANDisease (ALS1)121912432AL38V
19UniProtVAR_007139G42DSODC_HUMANDisease (ALS1)121912434AG41D
20UniProtVAR_007138G42SSODC_HUMANDisease (ALS1)121912433AG41S
21UniProtVAR_007140H44RSODC_HUMANDisease (ALS1)121912435AH43R
22UniProtVAR_013525F46CSODC_HUMANDisease (ALS1)121912457AF45C
23UniProtVAR_007141H47RSODC_HUMANDisease (ALS1)121912443AH46R
24UniProtVAR_007142H49QSODC_HUMANDisease (ALS1)  ---AH48Q
25UniProtVAR_045878H49RSODC_HUMANDisease (ALS1)  ---AH48R
26UniProtVAR_013526E50KSODC_HUMANDisease (ALS1)  ---AG49K
27UniProtVAR_013530L85FSODC_HUMANDisease (ALS1)  ---AL54F
28UniProtVAR_007143L85VSODC_HUMANDisease (ALS1)121912452AL54V
29UniProtVAR_007144G86RSODC_HUMANDisease (ALS1)121912436AG55R
30UniProtVAR_013531N87SSODC_HUMANDisease (ALS1)11556620AN56S
31UniProtVAR_045880V88ASODC_HUMANDisease (ALS1)  ---AV57A
32UniProtVAR_045881A90TSODC_HUMANDisease (ALS1)  ---AA59T
33UniProtVAR_013532A90VSODC_HUMANDisease (ALS1)  ---AA59V
34UniProtVAR_007145D91ASODC_HUMANDisease (ALS1)80265967AD60A
35UniProtVAR_013533D91VSODC_HUMANDisease (ALS1)  ---AD60V
36UniProtVAR_007146G94ASODC_HUMANDisease (ALS1)121912438AG63A
37UniProtVAR_007147G94CSODC_HUMANDisease (ALS1)121912437AG63C
38UniProtVAR_007148G94DSODC_HUMANDisease (ALS1)  ---AG63D
39UniProtVAR_007149G94RSODC_HUMANDisease (ALS1)121912437AG63R
40UniProtVAR_008719G94VSODC_HUMANDisease (ALS1)  ---AG63V
41UniProtVAR_065194A96GSODC_HUMANDisease (ALS1)  ---AA65G
42UniProtVAR_045882V98MSODC_HUMANDisease (ALS1)  ---AV67M
43UniProtVAR_007150E101GSODC_HUMANDisease (ALS1)121912439AE70G
44UniProtVAR_013534E101KSODC_HUMANDisease (ALS1)  ---AE70K
45UniProtVAR_007151D102GSODC_HUMANDisease (ALS1)  ---AD71G
46UniProtVAR_007152D102NSODC_HUMANDisease (ALS1)  ---AD71N
47UniProtVAR_008720I105FSODC_HUMANDisease (ALS1)121912445AI74F
48UniProtVAR_013535S106LSODC_HUMANDisease (ALS1)  ---AS75L
49UniProtVAR_007153L107VSODC_HUMANDisease (ALS1)121912440AL76V
50UniProtVAR_013536G109VSODC_HUMANDisease (ALS1)  ---AG78V
51UniProtVAR_077327C112YSODC_HUMANDisease (ALS1)  ---AS81Y
52UniProtVAR_013537I113MSODC_HUMANDisease (ALS1)  ---AI82M
53UniProtVAR_007154I113TSODC_HUMANDisease (ALS1)74315452AI82T
54UniProtVAR_007155I114TSODC_HUMANDisease (ALS1)121912441AI83T
55UniProtVAR_013538G115ASODC_HUMANDisease (ALS1)  ---AG84A
56UniProtVAR_007156R116GSODC_HUMANDisease (ALS1)  ---AR85G
57UniProtVAR_045883V119LSODC_HUMANDisease (ALS1)  ---AV88L
58UniProtVAR_007160L145FSODC_HUMANDisease (ALS1)  ---AL101F
59UniProtVAR_008724L145SSODC_HUMANDisease (ALS1)121912446AL101S
60UniProtVAR_008725A146TSODC_HUMANDisease (ALS1)121912447AA102T
61UniProtVAR_013540C147RSODC_HUMANDisease (ALS1)  ---AS103R
62UniProtVAR_045885G148RSODC_HUMANDisease (ALS1)  ---AG104R
63UniProtVAR_007161V149GSODC_HUMANDisease (ALS1)  ---AV105G
64UniProtVAR_007162V149ISODC_HUMANDisease (ALS1)567511139AV105I
65UniProtVAR_007163I150TSODC_HUMANDisease (ALS1)  ---AI106T
66UniProtVAR_007164I152TSODC_HUMANDisease (ALS1)121912449AI108T

  SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)
Biological Unit 2 (66, 66)
  dbSNPPDB
No.SourceVariant IDVariantUniProt IDStatusIDChainVariant
01UniProtVAR_013518A5SSODC_HUMANDisease (ALS1)  ---BA4S
02UniProtVAR_007130A5TSODC_HUMANDisease (ALS1)121912444BA4T
03UniProtVAR_007131A5VSODC_HUMANDisease (ALS1)121912442BA4V
04UniProtVAR_008717C7FSODC_HUMANDisease (ALS1)121912448BA6F
05UniProtVAR_007132V8ESODC_HUMANDisease (ALS1)  ---BV7E
06UniProtVAR_013519L9QSODC_HUMANDisease (ALS1)  ---BL8Q
07UniProtVAR_013520L9VSODC_HUMANDisease (ALS1)  ---BL8V
08UniProtVAR_013521G13RSODC_HUMANDisease (ALS1)121912456BG12R
09UniProtVAR_013522V15GSODC_HUMANDisease (ALS1)  ---BV14G
10UniProtVAR_007133V15MSODC_HUMANDisease (ALS1)  ---BV14M
11UniProtVAR_007134G17SSODC_HUMANDisease (ALS1)121912453BG16S
12UniProtVAR_045876F21CSODC_HUMANDisease (ALS1)  ---BF20C
13UniProtVAR_013523E22GSODC_HUMANDisease (ALS1)  ---BE21G
14UniProtVAR_007135E22KSODC_HUMANDisease (ALS1)121912450BE21K
15UniProtVAR_045877Q23LSODC_HUMANDisease (ALS1)  ---BQ22L
16UniProtVAR_007136G38RSODC_HUMANDisease (ALS1)121912431BG37R
17UniProtVAR_013524L39RSODC_HUMANDisease (ALS1)  ---BL38R
18UniProtVAR_007137L39VSODC_HUMANDisease (ALS1)121912432BL38V
19UniProtVAR_007139G42DSODC_HUMANDisease (ALS1)121912434BG41D
20UniProtVAR_007138G42SSODC_HUMANDisease (ALS1)121912433BG41S
21UniProtVAR_007140H44RSODC_HUMANDisease (ALS1)121912435BH43R
22UniProtVAR_013525F46CSODC_HUMANDisease (ALS1)121912457BF45C
23UniProtVAR_007141H47RSODC_HUMANDisease (ALS1)121912443BH46R
24UniProtVAR_007142H49QSODC_HUMANDisease (ALS1)  ---BH48Q
25UniProtVAR_045878H49RSODC_HUMANDisease (ALS1)  ---BH48R
26UniProtVAR_013526E50KSODC_HUMANDisease (ALS1)  ---BG49K
27UniProtVAR_013530L85FSODC_HUMANDisease (ALS1)  ---BL54F
28UniProtVAR_007143L85VSODC_HUMANDisease (ALS1)121912452BL54V
29UniProtVAR_007144G86RSODC_HUMANDisease (ALS1)121912436BG55R
30UniProtVAR_013531N87SSODC_HUMANDisease (ALS1)11556620BN56S
31UniProtVAR_045880V88ASODC_HUMANDisease (ALS1)  ---BV57A
32UniProtVAR_045881A90TSODC_HUMANDisease (ALS1)  ---BA59T
33UniProtVAR_013532A90VSODC_HUMANDisease (ALS1)  ---BA59V
34UniProtVAR_007145D91ASODC_HUMANDisease (ALS1)80265967BD60A
35UniProtVAR_013533D91VSODC_HUMANDisease (ALS1)  ---BD60V
36UniProtVAR_007146G94ASODC_HUMANDisease (ALS1)121912438BG63A
37UniProtVAR_007147G94CSODC_HUMANDisease (ALS1)121912437BG63C
38UniProtVAR_007148G94DSODC_HUMANDisease (ALS1)  ---BG63D
39UniProtVAR_007149G94RSODC_HUMANDisease (ALS1)121912437BG63R
40UniProtVAR_008719G94VSODC_HUMANDisease (ALS1)  ---BG63V
41UniProtVAR_065194A96GSODC_HUMANDisease (ALS1)  ---BA65G
42UniProtVAR_045882V98MSODC_HUMANDisease (ALS1)  ---BV67M
43UniProtVAR_007150E101GSODC_HUMANDisease (ALS1)121912439BE70G
44UniProtVAR_013534E101KSODC_HUMANDisease (ALS1)  ---BE70K
45UniProtVAR_007151D102GSODC_HUMANDisease (ALS1)  ---BD71G
46UniProtVAR_007152D102NSODC_HUMANDisease (ALS1)  ---BD71N
47UniProtVAR_008720I105FSODC_HUMANDisease (ALS1)121912445BI74F
48UniProtVAR_013535S106LSODC_HUMANDisease (ALS1)  ---BS75L
49UniProtVAR_007153L107VSODC_HUMANDisease (ALS1)121912440BL76V
50UniProtVAR_013536G109VSODC_HUMANDisease (ALS1)  ---BG78V
51UniProtVAR_077327C112YSODC_HUMANDisease (ALS1)  ---BS81Y
52UniProtVAR_013537I113MSODC_HUMANDisease (ALS1)  ---BI82M
53UniProtVAR_007154I113TSODC_HUMANDisease (ALS1)74315452BI82T
54UniProtVAR_007155I114TSODC_HUMANDisease (ALS1)121912441BI83T
55UniProtVAR_013538G115ASODC_HUMANDisease (ALS1)  ---BG84A
56UniProtVAR_007156R116GSODC_HUMANDisease (ALS1)  ---BR85G
57UniProtVAR_045883V119LSODC_HUMANDisease (ALS1)  ---BV88L
58UniProtVAR_007160L145FSODC_HUMANDisease (ALS1)  ---BL101F
59UniProtVAR_008724L145SSODC_HUMANDisease (ALS1)121912446BL101S
60UniProtVAR_008725A146TSODC_HUMANDisease (ALS1)121912447BA102T
61UniProtVAR_013540C147RSODC_HUMANDisease (ALS1)  ---BS103R
62UniProtVAR_045885G148RSODC_HUMANDisease (ALS1)  ---BG104R
63UniProtVAR_007161V149GSODC_HUMANDisease (ALS1)  ---BV105G
64UniProtVAR_007162V149ISODC_HUMANDisease (ALS1)567511139BV105I
65UniProtVAR_007163I150TSODC_HUMANDisease (ALS1)  ---BI106T
66UniProtVAR_007164I152TSODC_HUMANDisease (ALS1)121912449BI108T

  SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)

(-) PROSITE Motifs  (2, 4)

Asymmetric Unit (2, 4)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1SOD_CU_ZN_1PS00087 Copper/Zinc superoxide dismutase signature 1.SODC_HUMAN45-55
 
  2A:44-51
B:44-51
2SOD_CU_ZN_2PS00332 Copper/Zinc superoxide dismutase signature 2.SODC_HUMAN139-150
 
  2A:97-106
B:97-106
Biological Unit 1 (2, 2)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1SOD_CU_ZN_1PS00087 Copper/Zinc superoxide dismutase signature 1.SODC_HUMAN45-55
 
  1A:44-51
-
2SOD_CU_ZN_2PS00332 Copper/Zinc superoxide dismutase signature 2.SODC_HUMAN139-150
 
  1A:97-106
-
Biological Unit 2 (2, 2)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1SOD_CU_ZN_1PS00087 Copper/Zinc superoxide dismutase signature 1.SODC_HUMAN45-55
 
  1-
B:44-51
2SOD_CU_ZN_2PS00332 Copper/Zinc superoxide dismutase signature 2.SODC_HUMAN139-150
 
  1-
B:97-106

(-) Exons   (4, 8)

Asymmetric Unit (4, 8)
 ENSEMBLUniProtKBPDB
No.Transcript IDExonExon IDGenome LocationLengthIDLocationLengthCountLocationLength
1.1aENST000002701421aENSE00001507447chr21:33031935-33032154220SODC_HUMAN1-24242A:1-23
B:2-23
23
22
1.3ENST000002701423ENSE00001507446chr21:33036103-3303619997SODC_HUMAN25-57332A:24-51
B:24-51
28
28
1.4ENST000002701424ENSE00000952640chr21:33038762-3303883170SODC_HUMAN57-80240--
1.5bENST000002701425bENSE00000952641chr21:33039571-33039688118SODC_HUMAN80-119402A:52-88
B:52-88
37
37
1.6ENST000002701426ENSE00001847240chr21:33040784-33041244461SODC_HUMAN120-154352A:89-110 (gaps)
B:89-110 (gaps)
35
35

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it)
Chain A from PDB  Type:PROTEIN  Length:110
 aligned with SODC_HUMAN | P00441 from UniProtKB/Swiss-Prot  Length:154

    Alignment length:153
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151   
           SODC_HUMAN     2 ATKAVCVLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSAGPHFNPLSRKHGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHCIIGRTLVVHEKADDLGKGGNEESTKTGNAGSRLACGVIGIAQ 154
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeeeee.....eeeeeee.......eeeeeeee....eeeeeee....------------------------------.eeeeeee.....eeeeeee..............eeeee...---...----------....eeeeeeeeee Sec.struct. author
             SAPs(SNPs) (1) ---S-FEQ---R-G-S---CGL--------------RR--D-R-CR-QK----------------------------------FRSA-TA--A-G-M--GG--FLV-V--YMTAG--L-------------------------FTRRGT-T-- SAPs(SNPs) (1)
             SAPs(SNPs) (2) ---T---V-----M------K----------------V--S------R-----------------------------------V----VV--C------KN----------T-------------------------------S---I----- SAPs(SNPs) (2)
             SAPs(SNPs) (3) ---V----------------------------------------------------------------------------------------D------------------------------------------------------------ SAPs(SNPs) (3)
             SAPs(SNPs) (4) --------------------------------------------------------------------------------------------R------------------------------------------------------------ SAPs(SNPs) (4)
             SAPs(SNPs) (5) --------------------------------------------------------------------------------------------V------------------------------------------------------------ SAPs(SNPs) (5)
                    PROSITE -------------------------------------------SOD_CU_ZN_1-----------------------------------------------------------------------------------SOD_CU_ZN_2 ---- PROSITE
           Transcript 1 (1) Exon 1.1a  PDB: A:1-23 Exon 1.3  PDB: A:24-51           ----------------------Exon 1.5b  PDB: A:52-88 UniProt: 80-119 Exon 1.6  PDB: A:89-110 (gaps)      Transcript 1 (1)
           Transcript 1 (2) -------------------------------------------------------Exon 1.4  PDB: -        -------------------------------------------------------------------------- Transcript 1 (2)
                 4bcz A   1 ATKAVAVLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHGAG------------------------------GDLGNVTADKDGVADVSIEDSVISLSGDHSIIGRTLVVHEKA---GAG----------AGSRLASGVIGIAQ 110
                                    10        20        30        40        50|        -         -         - |      60        70        80        90  |   | |-        97       107   
                                                                             51                             52                                       93  94 |         97             
                                                                                                                                                           96                        

Chain B from PDB  Type:PROTEIN  Length:109
 aligned with SODC_HUMAN | P00441 from UniProtKB/Swiss-Prot  Length:154

    Alignment length:152
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152  
           SODC_HUMAN     3 TKAVCVLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSAGPHFNPLSRKHGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHCIIGRTLVVHEKADDLGKGGNEESTKTGNAGSRLACGVIGIAQ 154
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeeee.....eeeeeeee......eeeeeeee....eeeeeee....------------------------------.eeeeeee.....eeeeeee..............eeeee...---...----------....eeeeeeeee. Sec.struct. author
             SAPs(SNPs) (1) --S-FEQ---R-G-S---CGL--------------RR--D-R-CR-QK----------------------------------FRSA-TA--A-G-M--GG--FLV-V--YMTAG--L-------------------------FTRRGT-T-- SAPs(SNPs) (1)
             SAPs(SNPs) (2) --T---V-----M------K----------------V--S------R-----------------------------------V----VV--C------KN----------T-------------------------------S---I----- SAPs(SNPs) (2)
             SAPs(SNPs) (3) --V----------------------------------------------------------------------------------------D------------------------------------------------------------ SAPs(SNPs) (3)
             SAPs(SNPs) (4) -------------------------------------------------------------------------------------------R------------------------------------------------------------ SAPs(SNPs) (4)
             SAPs(SNPs) (5) -------------------------------------------------------------------------------------------V------------------------------------------------------------ SAPs(SNPs) (5)
                    PROSITE ------------------------------------------SOD_CU_ZN_1-----------------------------------------------------------------------------------SOD_CU_ZN_2 ---- PROSITE
           Transcript 1 (1) Exon 1.1a  PDB: B:2-23Exon 1.3  PDB: B:24-51           ----------------------Exon 1.5b  PDB: B:52-88 UniProt: 80-119 Exon 1.6  PDB: B:89-110 (gaps)      Transcript 1 (1)
           Transcript 1 (2) ------------------------------------------------------Exon 1.4  PDB: -        -------------------------------------------------------------------------- Transcript 1 (2)
                 4bcz B   2 TKAVAVLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHGAG------------------------------GDLGNVTADKDGVADVSIEDSVISLSGDHSIIGRTLVVHEKA---GAG----------AGSRLASGVIGIAQ 110
                                    11        21        31        41        51         -         -         -|       61        71        81        91 |   | | -        98       108  
                                                                            51                             52                                       93  94 |         97             
                                                                                                                                                          96                        

   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4BCZ)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4BCZ)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4BCZ)

(-) Gene Ontology  (100, 100)

Asymmetric Unit(hide GO term definitions)
Chain A,B   (SODC_HUMAN | P00441)
molecular function
    GO:0048365    Rac GTPase binding    Interacting selectively and non-covalently with Rac protein, any member of the Rac subfamily of the Ras superfamily of monomeric GTPases.
    GO:0016209    antioxidant activity    Inhibition of the reactions brought about by dioxygen (O2) or peroxides. Usually the antioxidant is effective because it can itself be more easily oxidized than the substance protected. The term is often applied to components that can trap free radicals, thereby breaking the chain reaction that normally leads to extensive biological damage.
    GO:0051087    chaperone binding    Interacting selectively and non-covalently with a chaperone protein, a class of proteins that bind to nascent or unfolded polypeptides and ensure correct folding or transport.
    GO:0005507    copper ion binding    Interacting selectively and non-covalently with copper (Cu) ions.
    GO:0019899    enzyme binding    Interacting selectively and non-covalently with any enzyme.
    GO:0042802    identical protein binding    Interacting selectively and non-covalently with an identical protein or proteins.
    GO:0046872    metal ion binding    Interacting selectively and non-covalently with any metal ion.
    GO:0016491    oxidoreductase activity    Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
    GO:0005515    protein binding    Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
    GO:0042803    protein homodimerization activity    Interacting selectively and non-covalently with an identical protein to form a homodimer.
    GO:0030346    protein phosphatase 2B binding    Interacting selectively and non-covalently with the enzyme protein phosphatase 2B.
    GO:0004784    superoxide dismutase activity    Catalysis of the reaction: 2 superoxide + 2 H+ = O2 + hydrogen peroxide.
    GO:0008270    zinc ion binding    Interacting selectively and non-covalently with zinc (Zn) ions.
biological process
    GO:0000187    activation of MAPK activity    The initiation of the activity of the inactive enzyme MAP kinase (MAPK).
    GO:0007568    aging    A developmental process that is a deterioration and loss of function over time. Aging includes loss of functions such as resistance to disease, homeostasis, and fertility, as well as wear and tear. Aging includes cellular senescence, but is more inclusive. May precede death and may succeed developmental maturation (GO:0021700).
    GO:0008089    anterograde axonal transport    The directed movement of organelles or molecules along microtubules from the cell body toward the cell periphery in nerve cell axons.
    GO:0060088    auditory receptor cell stereocilium organization    A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a stereocilium. A stereocilium is an actin-based protrusion from the apical surface of auditory hair cells.
    GO:0007569    cell aging    An aging process that has as participant a cell after a cell has stopped dividing. Cell aging may occur when a cell has temporarily stopped dividing through cell cycle arrest (GO:0007050) or when a cell has permanently stopped dividing, in which case it is undergoing cellular senescence (GO:0090398). May precede cell death (GO:0008219) and succeed cell maturation (GO:0048469).
    GO:0006879    cellular iron ion homeostasis    Any process involved in the maintenance of an internal steady state of iron ions at the level of a cell.
    GO:0071318    cellular response to ATP    Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ATP (adenosine 5'-triphosphate) stimulus.
    GO:0071276    cellular response to cadmium ion    Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cadmium (Cd) ion stimulus.
    GO:0034599    cellular response to oxidative stress    Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals.
    GO:0035865    cellular response to potassium ion    Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a potassium ion stimulus.
    GO:0007566    embryo implantation    Attachment of the blastocyst to the uterine lining.
    GO:0006749    glutathione metabolic process    The chemical reactions and pathways involving glutathione, the tripeptide glutamylcysteinylglycine, which acts as a coenzyme for some enzymes and as an antioxidant in the protection of sulfhydryl groups in enzymes and other proteins; it has a specific role in the reduction of hydrogen peroxide (H2O2) and oxidized ascorbate, and it participates in the gamma-glutamyl cycle.
    GO:0060047    heart contraction    The multicellular organismal process in which the heart decreases in volume in a characteristic way to propel blood through the body.
    GO:0050665    hydrogen peroxide biosynthetic process    The chemical reactions and pathways resulting in the formation of hydrogen peroxide (H2O2), a potentially harmful byproduct of aerobic cellular respiration which can cause damage to DNA.
    GO:0007626    locomotory behavior    The specific movement from place to place of an organism in response to external or internal stimuli. Locomotion of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions.
    GO:0046716    muscle cell cellular homeostasis    The cellular homeostatic process that preserves a muscle cell in a stable functional or structural state.
    GO:0002262    myeloid cell homeostasis    The process of regulating the proliferation and elimination of myeloid cells such that the total number of myeloid cells within a whole or part of an organism is stable over time in the absence of an outside stimulus.
    GO:0043066    negative regulation of apoptotic process    Any process that stops, prevents, or reduces the frequency, rate or extent of cell death by apoptotic process.
    GO:0045541    negative regulation of cholesterol biosynthetic process    Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of cholesterol.
    GO:0043524    negative regulation of neuron apoptotic process    Any process that stops, prevents, or reduces the frequency, rate or extent of cell death by apoptotic process in neurons.
    GO:0060052    neurofilament cytoskeleton organization    A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising neurofilaments and their associated proteins.
    GO:0001541    ovarian follicle development    The process whose specific outcome is the progression of the ovarian follicle over time, from its formation to the mature structure.
    GO:0055114    oxidation-reduction process    A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.
    GO:0032287    peripheral nervous system myelin maintenance    The process in which the structure and material content of mature peripheral nervous system myelin is kept in a functional state.
    GO:0001890    placenta development    The process whose specific outcome is the progression of the placenta over time, from its formation to the mature structure. The placenta is an organ of metabolic interchange between fetus and mother, partly of embryonic origin and partly of maternal origin.
    GO:0002576    platelet degranulation    The regulated exocytosis of secretory granules containing preformed mediators such as histamine and serotonin by a platelet.
    GO:0043065    positive regulation of apoptotic process    Any process that activates or increases the frequency, rate or extent of cell death by apoptotic process.
    GO:0043085    positive regulation of catalytic activity    Any process that activates or increases the activity of an enzyme.
    GO:0001819    positive regulation of cytokine production    Any process that activates or increases the frequency, rate or extent of production of a cytokine.
    GO:1902177    positive regulation of oxidative stress-induced intrinsic apoptotic signaling pathway    Any process that activates or increases the frequency, rate or extent of an oxidative stress-induced intrinsic apoptotic signaling pathway.
    GO:0032930    positive regulation of superoxide anion generation    Any process that activates or increases the frequency, rate or extent of enzymatic generation of superoxide by a cell.
    GO:0072593    reactive oxygen species metabolic process    The chemical reactions and pathways involving a reactive oxygen species, any molecules or ions formed by the incomplete one-electron reduction of oxygen. They contribute to the microbicidal activity of phagocytes, regulation of signal transduction and gene expression, and the oxidative damage to biopolymers.
    GO:0043087    regulation of GTPase activity    Any process that modulates the rate of GTP hydrolysis by a GTPase.
    GO:0033081    regulation of T cell differentiation in thymus    Any process that modulates the frequency, rate or extent of T cell differentiation in the thymus.
    GO:0008217    regulation of blood pressure    Any process that modulates the force with which blood travels through the circulatory system. The process is controlled by a balance of processes that increase pressure and decrease pressure.
    GO:0051881    regulation of mitochondrial membrane potential    Any process that modulates the establishment or extent of the mitochondrial membrane potential, the electric potential existing across the mitochondrial membrane arising from charges in the membrane itself and from the charges present in the media on either side of the membrane.
    GO:0040014    regulation of multicellular organism growth    Any process that modulates the frequency, rate or extent of growth of the body of an organism so that it reaches its usual body size.
    GO:0046620    regulation of organ growth    Any process that modulates the frequency, rate or extent of growth of an organ of an organism.
    GO:0045859    regulation of protein kinase activity    Any process that modulates the frequency, rate or extent of protein kinase activity.
    GO:0060087    relaxation of vascular smooth muscle    A negative regulation of smooth muscle contraction resulting in relaxation of vascular smooth muscle. The relaxation is mediated by a decrease in the phosphorylation state of myosin light chain. This can be achieved by removal of calcium from the cytoplasm to the sarcoplasmic reticulum lumen through the action of Ca2+ ATPases leading to a decrease myosin light chain kinase activity, and through calcium-independent pathways leading to a increase in myosin light chain phosphatase activity.
    GO:0019430    removal of superoxide radicals    Any process, acting at the cellular level, involved in removing superoxide radicals (O2-) from a cell or organism, e.g. by conversion to dioxygen (O2) and hydrogen peroxide (H2O2).
    GO:0001975    response to amphetamine    Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an amphetamine stimulus. Amphetamines consist of a group of compounds related to alpha-methylphenethylamine.
    GO:0046677    response to antibiotic    Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an antibiotic stimulus. An antibiotic is a chemical substance produced by a microorganism which has the capacity to inhibit the growth of or to kill other microorganisms.
    GO:0097332    response to antipsychotic drug    Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an antipsychotic drug stimulus. Antipsychotic drugs are agents that control agitated psychotic behaviour, alleviate acute psychotic states, reduce psychotic symptoms, and exert a quieting effect.
    GO:0048678    response to axon injury    Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an axon injury stimulus.
    GO:0034465    response to carbon monoxide    Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a carbon monoxide (CO) stimulus.
    GO:0046688    response to copper ion    Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a copper ion stimulus.
    GO:0042493    response to drug    Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a drug stimulus. A drug is a substance used in the diagnosis, treatment or prevention of a disease.
    GO:0045471    response to ethanol    Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ethanol stimulus.
    GO:0009408    response to heat    Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a heat stimulus, a temperature stimulus above the optimal temperature for that organism.
    GO:0042542    response to hydrogen peroxide    Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a hydrogen peroxide (H2O2) stimulus.
    GO:0031667    response to nutrient levels    Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus reflecting the presence, absence, or concentration of nutrients.
    GO:0010033    response to organic substance    Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an organic substance stimulus.
    GO:0006979    response to oxidative stress    Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals.
    GO:0000302    response to reactive oxygen species    Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a reactive oxygen species stimulus. Reactive oxygen species include singlet oxygen, superoxide, and oxygen free radicals.
    GO:0000303    response to superoxide    Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a superoxide stimulus. Superoxide is the anion, oxygen-, formed by addition of one electron to dioxygen (O2) or any compound containing the superoxide anion.
    GO:0001895    retina homeostasis    A tissue homeostatic process involved in the maintenance of an internal equilibrium within the retina of the eye, including control of cellular proliferation and death and control of metabolic function.
    GO:0008090    retrograde axonal transport    The directed movement of organelles or molecules along microtubules from the cell periphery toward the cell body in nerve cell axons.
    GO:0007605    sensory perception of sound    The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound.
    GO:0007283    spermatogenesis    The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis.
    GO:0042554    superoxide anion generation    The enzymatic generation of superoxide, the superoxide anion O2- (superoxide free radical), or any compound containing this species, by a cell in response to environmental stress, thereby mediating the activation of various stress-inducible signaling pathways.
    GO:0006801    superoxide metabolic process    The chemical reactions and pathways involving superoxide, the superoxide anion O2- (superoxide free radical), or any compound containing this species.
    GO:0048538    thymus development    The process whose specific outcome is the progression of the thymus over time, from its formation to the mature structure. The thymus is a symmetric bi-lobed organ involved primarily in the differentiation of immature to mature T cells, with unique vascular, nervous, epithelial, and lymphoid cell components.
    GO:0019226    transmission of nerve impulse    The neurological system process in which a signal is transmitted through the nervous system by a combination of action potential propagation and synaptic transmission.
cellular component
    GO:1904115    axon cytoplasm    Any cytoplasm that is part of a axon.
    GO:0005737    cytoplasm    All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
    GO:0031410    cytoplasmic vesicle    A vesicle found in the cytoplasm of a cell.
    GO:0005829    cytosol    The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
    GO:0032839    dendrite cytoplasm    All of the contents of a dendrite, excluding the surrounding plasma membrane.
    GO:0031045    dense core granule    Electron-dense organelle with a granular internal matrix; contains proteins destined to be secreted.
    GO:0070062    extracellular exosome    A vesicle that is released into the extracellular region by fusion of the limiting endosomal membrane of a multivesicular body with the plasma membrane. Extracellular exosomes, also simply called exosomes, have a diameter of about 40-100 nm.
    GO:0031012    extracellular matrix    A structure lying external to one or more cells, which provides structural support for cells or tissues.
    GO:0005576    extracellular region    The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite.
    GO:0005615    extracellular space    That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid.
    GO:0005764    lysosome    A small lytic vacuole that has cell cycle-independent morphology and is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions.
    GO:0005758    mitochondrial intermembrane space    The region between the inner and outer lipid bilayers of the mitochondrial envelope.
    GO:0005759    mitochondrial matrix    The gel-like material, with considerable fine structure, that lies in the matrix space, or lumen, of a mitochondrion. It contains the enzymes of the tricarboxylic acid cycle and, in some organisms, the enzymes concerned with fatty acid oxidation.
    GO:0005739    mitochondrion    A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration.
    GO:0043209    myelin sheath    An electrically insulating fatty layer that surrounds the axons of many neurons. It is an outgrowth of glial cells: Schwann cells supply the myelin for peripheral neurons while oligodendrocytes supply it to those of the central nervous system.
    GO:0043005    neuron projection    A prolongation or process extending from a nerve cell, e.g. an axon or dendrite.
    GO:0043025    neuronal cell body    The portion of a neuron that includes the nucleus, but excludes cell projections such as axons and dendrites.
    GO:0005654    nucleoplasm    That part of the nuclear content other than the chromosomes or the nucleolus.
    GO:0005634    nucleus    A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
    GO:0005777    peroxisome    A small organelle enclosed by a single membrane, and found in most eukaryotic cells. Contains peroxidases and other enzymes involved in a variety of metabolic processes including free radical detoxification, lipid catabolism and biosynthesis, and hydrogen peroxide metabolism.
    GO:0005886    plasma membrane    The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins.
    GO:0043234    protein complex    A stable macromolecular complex composed (only) of two or more polypeptide subunits along with any covalently attached molecules (such as lipid anchors or oligosaccharide) or non-protein prosthetic groups (such as nucleotides or metal ions). Prosthetic group in this context refers to a tightly bound cofactor. The component polypeptide subunits may be identical.
    GO:0030141    secretory granule    A small subcellular vesicle, surrounded by a membrane, that is formed from the Golgi apparatus and contains a highly concentrated protein destined for secretion. Secretory granules move towards the periphery of the cell and upon stimulation, their membranes fuse with the cell membrane, and their protein load is exteriorized. Processing of the contained protein may take place in secretory granules.

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  SODC_HUMAN | P00441
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        SODC_HUMAN | P004411azv 1ba9 1dsw 1fun 1hl4 1hl5 1kmg 1l3n 1mfm 1n18 1n19 1oez 1ozt 1ozu 1p1v 1ptz 1pu0 1rk7 1sos 1spd 1uxl 1uxm 2af2 2c9s 2c9u 2c9v 2gbt 2gbu 2gbv 2lu5 2mp3 2nam 2nnx 2r27 2v0a 2vr6 2vr7 2vr8 2wko 2wyt 2wyz 2wz0 2wz5 2wz6 2xjk 2xjl 2zkw 2zkx 2zky 3cqp 3cqq 3ecu 3ecv 3ecw 3gqf 3gtv 3gzo 3gzp 3gzq 3h2p 3h2q 3hff 3k91 3kh3 3kh4 3ltv 3qqd 3re0 3t5w 4a7g 4a7q 4a7s 4a7t 4a7u 4a7v 4b3e 4bcy 4bd4 4ff9 4mcm 4mcn 4nin 4nio 4nip 4oh2 4sod 4xcr 5dli 5iiw 5j07 5j0c 5j0f 5j0g 5k02 5u9m

(-) Related Entries Specified in the PDB File

1azv FAMILIAL ALS MUTANT G37R CUZNSOD (HUMAN)
1ba9 THE SOLUTION STRUCTURE OF REDUCED MONOMERIC SUPEROXIDE DISMUTASE, NMR, 36 STRUCTURES
1dsw THE SOLUTION STRUCTURE OF A MONOMERIC, REDUCED FORM OFHUMAN COPPER, ZINC SUPEROXIDE DISMUTASE BEARING THE SAMECHARGE AS THE NATIVE PROTEIN
1fun SUPEROXIDE DISMUTASE MUTANT WITH LYS 136 REPLACED BY GLU, CYS 6 REPLACED BY ALA AND CYS 111 REPLACED BY SER (K136E, C6A, C111S)
1hl4 THE STRUCTURE OF APO TYPE HUMAN CU, ZN SUPEROXIDE DISMUTASE
1hl5 THE STRUCTURE OF HOLO TYPE HUMAN CU, ZN SUPEROXIDE DISMUTASE
1kmg THE SOLUTION STRUCTURE OF MONOMERIC COPPER-FREE SUPEROXIDEDISMUTASE
1l3n THE SOLUTION STRUCTURE OF REDUCED DIMERIC COPPER ZINC SOD:THE STRUCTURAL EFFECTS OF DIMERIZATION
1mfm MONOMERIC HUMAN SOD MUTANT F50E/G51E/E133Q AT ATOMIC RESOLUTION
1n18 THERMOSTABLE MUTANT OF HUMAN SUPEROXIDE DISMUTASE, C6A, C111S
1n19 STRUCTURE OF THE HSOD A4V MUTANT
1oez ZN HIS46ARG MUTANT OF HUMAN CU, ZN SUPEROXIDE DISMUTASE
1ozt CRYSTAL STRUCTURE OF APO-H46R FAMILIAL ALS MUTANT HUMAN CU,ZN SUPEROXIDE DISMUTASE (CUZNSOD) TO 2.5A RESOLUTION
1ozu CRYSTAL STRUCTURE OF FAMILIAL ALS MUTANT S134N OF HUMAN CU,ZN SUPEROXIDE DISMUTASE (CUZNSOD) TO 1.3A RESOLUTION
1p1v CRYSTAL STRUCTURE OF FALS-ASSOCIATED HUMAN COPPER- ZINCSUPEROXIDE DISMUTASE (CUZNSOD) MUTANT D125H TO 1.4A
1ptz CRYSTAL STRUCTURE OF THE HUMAN CU, ZN SUPEROXIDE DISMUTASE,FAMILIAL AMYOTROPHIC LATERAL SCLEROSIS (FALS) MUTANT H43R
1pu0 STRUCTURE OF HUMAN CU,ZN SUPEROXIDE DISMUTASE
1rk7 SOLUTION STRUCTURE OF APO CU,ZN SUPEROXIDE DISMUTASE: ROLEOF METAL IONS IN PROTEIN FOLDING
1sos SUPEROXIDE DISMUTASE MUTANT WITH CYS 6 REPLACED BY ALA AND CYS 111 REPLACED BY SER (C6A, C111S)
1spd SUPEROXIDE DISMUTASE
1uxl I113T MUTANT OF HUMAN SOD1
1uxm A4V MUTANT OF HUMAN SOD1
2af2 SOLUTION STRUCTURE OF DISULFIDE REDUCED AND COPPER DEPLETEDHUMAN SUPEROXIDE DISMUTASE
2c9s 1.24 ANGSTROMS RESOLUTION STRUCTURE OF ZN-ZN HUMAN SUPEROXIDE DISMUTASE
2c9u 1.24 ANGSTROMS RESOLUTION STRUCTURE OF AS-ISOLATED CU -ZN HUMAN SUPEROXIDE DISMUTASE
2c9v ATOMIC RESOLUTION STRUCTURE OF CU-ZN HUMAN SUPEROXIDE DISMUTASE
2v0a ATOMIC RESOLUTION CRYSTAL STRUCTURE OF HUMAN SUPEROXIDE DISMUTASE
2vr6 CRYSTAL STRUCTURE OF G85R ALS MUTANT OF HUMAN CU,ZN SUPEROXIDE DISMUTASE (CUZNSOD) AT 1.3 A RESOLUTION
2vr7 CRYSTAL STRUCTURE OF G85R ALS MUTANT OF HUMAN CU,ZN SUPEROXIDE DISMUTASE (CUZNSOD) AT 1.58 A RESOLUTION
2vr8 CRYSTAL STRUCTURE OF G85R ALS MUTANT OF HUMAN CU,ZN SUPEROXIDE DISMUTASE (CUZNSOD) AT 1.36 A RESOLUTION
2wko STRUCTURE OF METAL LOADED PATHOGENIC SOD1 MUTANT G93A.
2wyt 1.0 A RESOLUTION STRUCTURE OF L38V SOD1 MUTANT
2wyz L38V SOD1 MUTANT COMPLEXED WITH UMP
2wz0 L38V SOD1 MUTANT COMPLEXED WITH ANILINE.
2wz5 L38V SOD1 MUTANT COMPLEXED WITH L-METHIONINE.
2wz6 G93A SOD1 MUTANT COMPLEXED WITH QUINAZOLINE.
2xjk MONOMERIC HUMAN CU,ZN SUPEROXIDE DISMUTASE
2xjl MONOMERIC HUMAN CU,ZN SUPEROXIDE DISMUTASE WITHOUT CU LIGANDS
4a7g STRUCTURE OF HUMAN I113T SOD1 MUTANT COMPLEXED WITH 4 -METHYLPIPERAZIN-1-YL)QUINAZOLINE IN THE P21 SPACE GROUP.
4a7q STRUCTURE OF HUMAN I113T SOD1 MUTANT COMPLEXED WITH 4 -(4-METHYL-1,4-DIAZEPAN-1-YL)QUINAZOLINE IN THE P21 SPACE GROUP.
4a7r STRUCTURE OF HUMAN I113T SOD1 MUTANT COMPLEXED WITH 4 -(4-METHYL-1,4-DIAZEPAN-1-YL)-2-(TRIFLUOROMETHYL) QUINAZOLINE IN THE P21 SPACE GROUP
4a7s STRUCTURE OF HUMAN I113T SOD1 MUTANT COMPLEXED WITH 5 -FLUOROURIDINE IN THE P21 SPACE GROUP
4a7t STRUCTURE OF HUMAN I113T SOD1 MUTANT COMPLEXED WITH ISOPROTERANOL IN THE P21 SPACE GROUP
4a7u STRUCTURE OF HUMAN I113T SOD1 COMPLEXED WITH ADRENALINE IN THE P21 SPACE GROUP.
4a7v STRUCTURE OF HUMAN I113T SOD1 MUTANT COMPLEXED WITH DOPAMINE IN THE P21 SPACE GROUP
4b3e STRUCTURE OF COPPER-ZINC SUPEROXIDE DISMUTASE COMPLEXED WITH BICARBONATE.
4bcy MONOMERIC HUMAN CU,ZN SUPEROXIDE DISMUTASE, MUTATION H43F