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(-)Asym./Biol. Unit
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(-) Description

Title :  A MOLECULAR BASIS FOR THE ACTION OF THE COLLAGEN-SPECIFIC CHAPERONE HSP47-SERPINH1 AND ITS STRUCTURE-SPECIFIC CLIENT RECOGNITION.
 
Authors :  C. Widmer, J. M. Gebauer, E. Brunstein, S. Rosenbaum, F. Zaucke, C. Droe T. Leeb, U. Baumann
Date :  15 Jun 12  (Deposition) - 15 Aug 12  (Release) - 28 Oct 15  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.24
Chains :  Asym./Biol. Unit :  A,B,C
Keywords :  Structural Protein, Cmp (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  C. Widmer, J. M. Gebauer, E. Brunstein, S. Rosenbaum, F. Zaucke, C. Drogemuller, T. Leeb, U. Baumann
Molecular Basis For The Action Of The Collagen-Specific Chaperone Hsp47/Serpinh1 And Its Structure-Specific Client Recognition.
Proc. Natl. Acad. Sci. Usa V. 109 13243 2012
PubMed-ID: 22847422  |  Reference-DOI: 10.1073/PNAS.1208072109

(-) Compounds

Molecule 1 - COLLAGEN-LIKE PEPTIDE
    Chains: A, B, C
    Organism Scientific: SYNTHETIC CONSTRUCT
    Organism Taxid: 32630
    Synonym: HSP47 BINDING COLLAGEN-LIKE PEPTIDE
    Synthetic: YES

 Structural Features

(-) Chains, Units

  123
Asymmetric/Biological Unit : ABC

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (2, 6)

Asymmetric/Biological Unit (2, 6)
No.NameCountTypeFull Name
1ACE3Mod. Amino AcidACETYL GROUP
2NH23Mod. Amino AcidAMINO GROUP

(-) Sites  (0, 0)

(no "Site" information available for 4AXY)

(-) SS Bonds  (0, 0)

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(-) Cis Peptide Bonds  (0, 0)

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 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

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(-) PROSITE Motifs  (0, 0)

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(-) Exons   (0, 0)

(no "Exon" information available for 4AXY)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:20
                                                   
               SCOP domains -------------------- SCOP domains
               CATH domains -------------------- CATH domains
               Pfam domains -------------------- Pfam domains
         Sec.struct. author .................... Sec.struct. author
                 SAPs(SNPs) -------------------- SAPs(SNPs)
                    PROSITE -------------------- PROSITE
                 Transcript -------------------- Transcript
                  4axy A  0 xPPGPPGPTGPRGPPGPPGx 19
                            |        9        19
                            |                 19-NH2
                            0-ACE               


Chain B from PDB  Type:PROTEIN  Length:20
                                                   
               SCOP domains -------------------- SCOP domains
               CATH domains -------------------- CATH domains
               Pfam domains -------------------- Pfam domains
         Sec.struct. author .................... Sec.struct. author
                 SAPs(SNPs) -------------------- SAPs(SNPs)
                    PROSITE -------------------- PROSITE
                 Transcript -------------------- Transcript
                  4axy B  0 xPPGPPGPTGPRGPPGPPGx 19
                            |        9        19
                            |                 19-NH2
                            0-ACE               


Chain C from PDB  Type:PROTEIN  Length:20
                                                   
               SCOP domains -------------------- SCOP domains
               CATH domains -------------------- CATH domains
               Pfam domains -------------------- Pfam domains
         Sec.struct. author .................... Sec.struct. author
                 SAPs(SNPs) -------------------- SAPs(SNPs)
                    PROSITE -------------------- PROSITE
                 Transcript -------------------- Transcript
                  4axy C  0 xPPGPPGPTGPRGPPGPPGx 19
                            |        9        19
                            |                 19-NH2
                            0-ACE
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4AXY)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4AXY)

(-) Pfam Domains  (0, 0)

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(-) Gene Ontology  (0, 0)

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