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(-) Description

Title :  CRYSTAL STRUCTURE OF PA-IL LECTIN COMPLEXED WITH GALAG0 AT 2.3 A RESOLUTION
 
Authors :  R. U. Kadam, M. Bergmann, M. Hurley, D. Garg, M. Cacciarini, M. A. Swider C. Nativi, M. Sattler, A. R. Smyth, P. Williams, M. Camara, A. Stocker, J. -L. Reymond
Date :  19 Aug 11  (Deposition) - 21 Sep 11  (Release) - 12 Jul 17  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.29
Chains :  Asym. Unit :  A,B,C,D,E,F,G,H,I,J,N
Biol. Unit 1:  A,I  (1x)
Biol. Unit 2:  B,J  (1x)
Biol. Unit 3:  C  (1x)
Biol. Unit 4:  D  (1x)
Biol. Unit 5:  E  (1x)
Biol. Unit 6:  F,N  (1x)
Biol. Unit 7:  G  (1x)
Biol. Unit 8:  H  (1x)
Keywords :  Sugar Binding Protein, Adhesin, Glycosphingolipid-Antigen, Galactose- Specific, Galactosides (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  R. U. Kadam, M. Bergmann, M. Hurley, D. Garg, M. Cacciarini, M. A. Swiderska, C. Nativi, M. Sattler, A. R. Smyth, P. Williams, M. Camara, A. Stocker, T. Darbre, J. -L. Reymond
A Glycopeptide Dendrimer Inhibitor Of The Galactose-Specifi Lectin Leca And Of Pseudomonas Aeruginosa Biofilms.
Angew. Chem. Int. Ed. Engl. V. 50 10631 2011
PubMed-ID: 21919164  |  Reference-DOI: 10.1002/ANIE.201104342

(-) Compounds

Molecule 1 - PA-I GALACTOPHILIC LECTIN
    Chains: A, B, C, D, E, F, G, H
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PET25PAIL
    Expression System Strain: BL21(DE3)
    Expression System Taxid: 469008
    Expression System Vector: PET25
    Expression System Vector Type: PLASMID
    Gene: LECA, PA1L, PA2570
    Organism Scientific: PSEUDOMONAS AERUGINOSA (STRAIN ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
    Organism Taxid: 208964
    Strain: ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1
    Synonym: PA-IL,GALACTOSE-BINDING LECTIN
 
Molecule 2 - GALA-LYS-PRO-LEUNH2
    Chains: I, J, N
    Engineered: YES
    Organism Scientific: SYNTHETIC CONSTRUCT
    Organism Taxid: 32630
    Other Details: GALA-LYS-PRO-LEUNH2 WAS SYNTHESIZED ON SOLID PHASE
    Synthetic: YES

 Structural Features

(-) Chains, Units

  1234567891011
Asymmetric Unit : ABCDEFGHIJN
Biological Unit 1 (1x): A       I  
Biological Unit 2 (1x):  B       J 
Biological Unit 3 (1x):   C        
Biological Unit 4 (1x):    D       
Biological Unit 5 (1x):     E      
Biological Unit 6 (1x):      F    N
Biological Unit 7 (1x):       G    
Biological Unit 8 (1x):        H   

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (4, 27)

Asymmetric Unit (4, 27)
No.NameCountTypeFull Name
1CA8Ligand/IonCALCIUM ION
2GAL8Ligand/IonBETA-D-GALACTOSE
3NH23Mod. Amino AcidAMINO GROUP
4PHB8Ligand/IonP-HYDROXYBENZOIC ACID
Biological Unit 1 (3, 3)
No.NameCountTypeFull Name
1CA-1Ligand/IonCALCIUM ION
2GAL1Ligand/IonBETA-D-GALACTOSE
3NH21Mod. Amino AcidAMINO GROUP
4PHB1Ligand/IonP-HYDROXYBENZOIC ACID
Biological Unit 2 (3, 3)
No.NameCountTypeFull Name
1CA-1Ligand/IonCALCIUM ION
2GAL1Ligand/IonBETA-D-GALACTOSE
3NH21Mod. Amino AcidAMINO GROUP
4PHB1Ligand/IonP-HYDROXYBENZOIC ACID
Biological Unit 3 (2, 2)
No.NameCountTypeFull Name
1CA-1Ligand/IonCALCIUM ION
2GAL1Ligand/IonBETA-D-GALACTOSE
3NH2-1Mod. Amino AcidAMINO GROUP
4PHB1Ligand/IonP-HYDROXYBENZOIC ACID
Biological Unit 4 (2, 2)
No.NameCountTypeFull Name
1CA-1Ligand/IonCALCIUM ION
2GAL1Ligand/IonBETA-D-GALACTOSE
3NH2-1Mod. Amino AcidAMINO GROUP
4PHB1Ligand/IonP-HYDROXYBENZOIC ACID
Biological Unit 5 (2, 2)
No.NameCountTypeFull Name
1CA-1Ligand/IonCALCIUM ION
2GAL1Ligand/IonBETA-D-GALACTOSE
3NH2-1Mod. Amino AcidAMINO GROUP
4PHB1Ligand/IonP-HYDROXYBENZOIC ACID
Biological Unit 6 (3, 3)
No.NameCountTypeFull Name
1CA-1Ligand/IonCALCIUM ION
2GAL1Ligand/IonBETA-D-GALACTOSE
3NH21Mod. Amino AcidAMINO GROUP
4PHB1Ligand/IonP-HYDROXYBENZOIC ACID
Biological Unit 7 (2, 2)
No.NameCountTypeFull Name
1CA-1Ligand/IonCALCIUM ION
2GAL1Ligand/IonBETA-D-GALACTOSE
3NH2-1Mod. Amino AcidAMINO GROUP
4PHB1Ligand/IonP-HYDROXYBENZOIC ACID
Biological Unit 8 (2, 2)
No.NameCountTypeFull Name
1CA-1Ligand/IonCALCIUM ION
2GAL1Ligand/IonBETA-D-GALACTOSE
3NH2-1Mod. Amino AcidAMINO GROUP
4PHB1Ligand/IonP-HYDROXYBENZOIC ACID

(-) Sites  (24, 24)

Asymmetric Unit (24, 24)
No.NameEvidenceResiduesDescription
01AC1SOFTWARETYR A:36 , ASP A:100 , THR A:104 , ASN A:107 , ASN A:108 , GAL A:202BINDING SITE FOR RESIDUE CA A 201
02AC2SOFTWARETYR A:36 , HIS A:50 , ASP A:100 , THR A:104 , ASN A:107 , CA A:201 , HOH A:338 , HOH A:327 , HOH A:305 , HOH A:307 , GLU F:11 , PRO F:102 , GLY F:103 , PHB A:203BINDING SITE FOR RESIDUE GAL I 299
03AC3SOFTWAREHIS A:50 , GLY F:103 , GAL A:202 , LYS I:301BINDING SITE FOR RESIDUE PHB I 300
04AC4SOFTWARETYR B:36 , ASP B:100 , THR B:104 , ASN B:107 , ASN B:108 , GAL B:202BINDING SITE FOR RESIDUE CA B 201
05AC5SOFTWARETYR B:36 , HIS B:50 , GLN B:53 , ASP B:100 , VAL B:101 , THR B:104 , ASN B:107 , CA B:201 , HOH B:321 , HOH B:313 , HOH B:311 , PHB B:203BINDING SITE FOR RESIDUE GAL J 299
06AC6SOFTWARETYR B:36 , HIS B:50 , ASP G:52 , GLN G:53 , GLY G:54 , HIS G:58 , GAL B:202 , LYS J:301 , PRO J:302BINDING SITE FOR RESIDUE PHB J 300
07AC7SOFTWARETYR C:36 , ASP C:100 , THR C:104 , ASN C:107 , ASN C:108 , GAL C:202BINDING SITE FOR RESIDUE CA C 201
08AC8SOFTWARETYR C:36 , HIS C:50 , GLN C:53 , ASP C:100 , VAL C:101 , THR C:104 , ASN C:107 , CA C:201 , HOH C:355 , HOH C:310 , HOH C:327 , PHB C:203BINDING SITE FOR RESIDUE GAL K 299
09AC9SOFTWAREHIS C:50 , GAL C:202BINDING SITE FOR RESIDUE PHB K 300
10BC1SOFTWARETYR D:36 , ASP D:100 , THR D:104 , ASN D:107 , ASN D:108 , GAL D:202BINDING SITE FOR RESIDUE CA D 201
11BC2SOFTWAREGLU B:11 , PRO B:102 , GLY B:103 , HOH D:301 , TYR D:36 , HIS D:50 , ASP D:100 , THR D:104 , ASN D:107 , CA D:201 , HOH D:342 , HOH D:314 , HOH D:306 , PHB D:203BINDING SITE FOR RESIDUE GAL L 299
12BC3SOFTWAREGLY B:103 , HIS D:50 , HOH D:361 , GAL D:202BINDING SITE FOR RESIDUE PHB L 300
13BC4SOFTWARETYR E:36 , ASP E:100 , THR E:104 , ASN E:107 , ASN E:108 , GAL E:202BINDING SITE FOR RESIDUE CA E 201
14BC5SOFTWARETYR E:36 , HIS E:50 , GLN E:53 , ASP E:100 , THR E:104 , ASN E:107 , CA E:201 , HOH E:341 , HOH E:324 , PHB E:203BINDING SITE FOR RESIDUE GAL M 299
15BC6SOFTWAREHIS E:50 , GAL E:202BINDING SITE FOR RESIDUE PHB M 300
16BC7SOFTWARETYR F:36 , ASP F:100 , THR F:104 , ASN F:107 , ASN F:108 , GAL F:202BINDING SITE FOR RESIDUE CA F 201
17BC8SOFTWARETYR F:36 , HIS F:50 , GLN F:53 , ASP F:100 , VAL F:101 , THR F:104 , ASN F:107 , CA F:201 , HOH H:336 , HOH F:315 , HOH F:342 , GLN H:53 , PHB F:203BINDING SITE FOR RESIDUE GAL N 299
18BC9SOFTWARETYR F:36 , HIS F:50 , HOH F:351 , ASP H:52 , GLN H:53 , GLY H:54 , HIS H:58 , GAL F:202 , LYS N:301 , PRO N:302BINDING SITE FOR RESIDUE PHB N 300
19CC1SOFTWARETYR G:36 , ASP G:100 , THR G:104 , ASN G:107 , ASN G:108 , GAL G:202BINDING SITE FOR RESIDUE CA G 201
20CC2SOFTWARETYR G:36 , HIS G:50 , GLN G:53 , ASP G:100 , THR G:104 , ASN G:107 , CA G:201 , HOH G:352 , HOH G:323 , HOH G:322 , PHB G:203BINDING SITE FOR RESIDUE GAL O 299
21CC3SOFTWAREHIS G:50 , HOH G:350 , GAL G:202BINDING SITE FOR RESIDUE PHB O 300
22CC4SOFTWARETYR H:36 , ASP H:100 , THR H:104 , ASN H:107 , ASN H:108 , GAL H:202BINDING SITE FOR RESIDUE CA H 201
23CC5SOFTWARETYR H:36 , HIS H:50 , GLN H:53 , ASP H:100 , THR H:104 , ASN H:107 , CA H:201 , HOH H:332 , HOH H:315 , PHB H:203BINDING SITE FOR RESIDUE GAL P 299
24CC6SOFTWAREHIS H:50 , GAL H:202BINDING SITE FOR RESIDUE PHB P 300

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 3ZYB)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 3ZYB)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 3ZYB)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 3ZYB)

(-) Exons   (0, 0)

(no "Exon" information available for 3ZYB)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:121
 aligned with PA1L_PSEAE | Q05097 from UniProtKB/Swiss-Prot  Length:122

    Alignment length:121
                                    11        21        31        41        51        61        71        81        91       101       111       121 
           PA1L_PSEAE     2 AWKGEVLANNEAGQVTSIIYNPGDVITIVAAGWASYGPTQKWGPQGDREHPDQGLICHDAFCGALVMKIGNSGTIPVNTGLFRWVAPNNVQGAITLIYNDVPGTYGNNSGSFSVNIGKDQS 122
               SCOP domains ------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeee......eeeeeee....eeeeeee..ee.............................eeeee.....ee...eeeee.......eeeeeee.....hhhhheeeeeeeeeee.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------- Transcript
                 3zyb A   1 AWKGEVLANNEAGQVTSIIYNPGDVITIVAAGWASYGPTQKWGPQGDREHPDQGLICHDAFCGALVMKIGNSGTIPVNTGLFRWVAPNNVQGAITLIYNDVPGTYGNNSGSFSVNIGKDQS 121
                                    10        20        30        40        50        60        70        80        90       100       110       120 


Chain B from PDB  Type:PROTEIN  Length:121
 aligned with PA1L_PSEAE | Q05097 from UniProtKB/Swiss-Prot  Length:122

    Alignment length:121
                                    11        21        31        41        51        61        71        81        91       101       111       121 
           PA1L_PSEAE     2 AWKGEVLANNEAGQVTSIIYNPGDVITIVAAGWASYGPTQKWGPQGDREHPDQGLICHDAFCGALVMKIGNSGTIPVNTGLFRWVAPNNVQGAITLIYNDVPGTYGNNSGSFSVNIGKDQS 122
               SCOP domains ------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeee......eeeeeee....eeeeeee..ee.........eee..............eeeeeeee.....ee...eeeeee......eeeeeee.....hhhhheeeeeeeeee... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------- Transcript
                 3zyb B   1 AWKGEVLANNEAGQVTSIIYNPGDVITIVAAGWASYGPTQKWGPQGDREHPDQGLICHDAFCGALVMKIGNSGTIPVNTGLFRWVAPNNVQGAITLIYNDVPGTYGNNSGSFSVNIGKDQS 121
                                    10        20        30        40        50        60        70        80        90       100       110       120 


Chain C from PDB  Type:PROTEIN  Length:121
 aligned with PA1L_PSEAE | Q05097 from UniProtKB/Swiss-Prot  Length:122

    Alignment length:121
                                    11        21        31        41        51        61        71        81        91       101       111       121 
           PA1L_PSEAE     2 AWKGEVLANNEAGQVTSIIYNPGDVITIVAAGWASYGPTQKWGPQGDREHPDQGLICHDAFCGALVMKIGNSGTIPVNTGLFRWVAPNNVQGAITLIYNDVPGTYGNNSGSFSVNIGKDQS 122
               SCOP domains ------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeee......eeeeeee....eeeeeeeeeee.........eee..............eeeeeeee.....ee...eeeee.......eeeeeee.....hhhhheeeeeeeeeee.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------- Transcript
                 3zyb C   1 AWKGEVLANNEAGQVTSIIYNPGDVITIVAAGWASYGPTQKWGPQGDREHPDQGLICHDAFCGALVMKIGNSGTIPVNTGLFRWVAPNNVQGAITLIYNDVPGTYGNNSGSFSVNIGKDQS 121
                                    10        20        30        40        50        60        70        80        90       100       110       120 


Chain D from PDB  Type:PROTEIN  Length:121
 aligned with PA1L_PSEAE | Q05097 from UniProtKB/Swiss-Prot  Length:122

    Alignment length:121
                                    11        21        31        41        51        61        71        81        91       101       111       121 
           PA1L_PSEAE     2 AWKGEVLANNEAGQVTSIIYNPGDVITIVAAGWASYGPTQKWGPQGDREHPDQGLICHDAFCGALVMKIGNSGTIPVNTGLFRWVAPNNVQGAITLIYNDVPGTYGNNSGSFSVNIGKDQS 122
               SCOP domains ------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeee......eeeeeee.....eeeeee..ee.............................eeeee.....ee...eeeee.......eeeeeee.....hhhhheeeeeeeeee... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------- Transcript
                 3zyb D   1 AWKGEVLANNEAGQVTSIIYNPGDVITIVAAGWASYGPTQKWGPQGDREHPDQGLICHDAFCGALVMKIGNSGTIPVNTGLFRWVAPNNVQGAITLIYNDVPGTYGNNSGSFSVNIGKDQS 121
                                    10        20        30        40        50        60        70        80        90       100       110       120 


Chain E from PDB  Type:PROTEIN  Length:121
 aligned with PA1L_PSEAE | Q05097 from UniProtKB/Swiss-Prot  Length:122

    Alignment length:121
                                    11        21        31        41        51        61        71        81        91       101       111       121 
           PA1L_PSEAE     2 AWKGEVLANNEAGQVTSIIYNPGDVITIVAAGWASYGPTQKWGPQGDREHPDQGLICHDAFCGALVMKIGNSGTIPVNTGLFRWVAPNNVQGAITLIYNDVPGTYGNNSGSFSVNIGKDQS 122
               SCOP domains ------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeee......eeeeeee.....eeeeee..ee.........eee..............eeeeeeee.....ee...eeeee.......eeeeeee.....hhhhheeeeeeeeee... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------- Transcript
                 3zyb E   1 AWKGEVLANNEAGQVTSIIYNPGDVITIVAAGWASYGPTQKWGPQGDREHPDQGLICHDAFCGALVMKIGNSGTIPVNTGLFRWVAPNNVQGAITLIYNDVPGTYGNNSGSFSVNIGKDQS 121
                                    10        20        30        40        50        60        70        80        90       100       110       120 


Chain F from PDB  Type:PROTEIN  Length:121
 aligned with PA1L_PSEAE | Q05097 from UniProtKB/Swiss-Prot  Length:122

    Alignment length:121
                                    11        21        31        41        51        61        71        81        91       101       111       121 
           PA1L_PSEAE     2 AWKGEVLANNEAGQVTSIIYNPGDVITIVAAGWASYGPTQKWGPQGDREHPDQGLICHDAFCGALVMKIGNSGTIPVNTGLFRWVAPNNVQGAITLIYNDVPGTYGNNSGSFSVNIGKDQS 122
               SCOP domains ------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeee......eeeeeee.....eeeeee..ee.........eee..............eeeeeeee.....ee...eeeee.......eeeeeee.....hhhhheeeeeeeeee... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------- Transcript
                 3zyb F   1 AWKGEVLANNEAGQVTSIIYNPGDVITIVAAGWASYGPTQKWGPQGDREHPDQGLICHDAFCGALVMKIGNSGTIPVNTGLFRWVAPNNVQGAITLIYNDVPGTYGNNSGSFSVNIGKDQS 121
                                    10        20        30        40        50        60        70        80        90       100       110       120 


Chain G from PDB  Type:PROTEIN  Length:121
 aligned with PA1L_PSEAE | Q05097 from UniProtKB/Swiss-Prot  Length:122

    Alignment length:121
                                    11        21        31        41        51        61        71        81        91       101       111       121 
           PA1L_PSEAE     2 AWKGEVLANNEAGQVTSIIYNPGDVITIVAAGWASYGPTQKWGPQGDREHPDQGLICHDAFCGALVMKIGNSGTIPVNTGLFRWVAPNNVQGAITLIYNDVPGTYGNNSGSFSVNIGKDQS 122
               SCOP domains ------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeee......eeeeeee....eeeeeeeeeee.........eee..............eeeeeeee.....ee...eeeee.......eeeeeee.....hhhhheeeeeeeeeee.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------- Transcript
                 3zyb G   1 AWKGEVLANNEAGQVTSIIYNPGDVITIVAAGWASYGPTQKWGPQGDREHPDQGLICHDAFCGALVMKIGNSGTIPVNTGLFRWVAPNNVQGAITLIYNDVPGTYGNNSGSFSVNIGKDQS 121
                                    10        20        30        40        50        60        70        80        90       100       110       120 


Chain H from PDB  Type:PROTEIN  Length:121
 aligned with PA1L_PSEAE | Q05097 from UniProtKB/Swiss-Prot  Length:122

    Alignment length:121
                                    11        21        31        41        51        61        71        81        91       101       111       121 
           PA1L_PSEAE     2 AWKGEVLANNEAGQVTSIIYNPGDVITIVAAGWASYGPTQKWGPQGDREHPDQGLICHDAFCGALVMKIGNSGTIPVNTGLFRWVAPNNVQGAITLIYNDVPGTYGNNSGSFSVNIGKDQS 122
               SCOP domains ------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeee......eeeeeee....eeeeeeeeeee.........eee..............eeeeeeee.....ee...eeeeee......eeeeeee.....hhhhheeeeeeeeee... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------- Transcript
                 3zyb H   1 AWKGEVLANNEAGQVTSIIYNPGDVITIVAAGWASYGPTQKWGPQGDREHPDQGLICHDAFCGALVMKIGNSGTIPVNTGLFRWVAPNNVQGAITLIYNDVPGTYGNNSGSFSVNIGKDQS 121
                                    10        20        30        40        50        60        70        80        90       100       110       120 


Chain I from PDB  Type:PROTEIN  Length:4
                                    
               SCOP domains ---- SCOP domains
               CATH domains ---- CATH domains
               Pfam domains ---- Pfam domains
         Sec.struct. author .... Sec.struct. author
                 SAPs(SNPs) ---- SAPs(SNPs)
                    PROSITE ---- PROSITE
                 Transcript ---- Transcript
                 3zyb I 301 KPLx 304
                               |
                             304-NH2


Chain J from PDB  Type:PROTEIN  Length:4
                                    
               SCOP domains ---- SCOP domains
               CATH domains ---- CATH domains
               Pfam domains ---- Pfam domains
         Sec.struct. author .... Sec.struct. author
                 SAPs(SNPs) ---- SAPs(SNPs)
                    PROSITE ---- PROSITE
                 Transcript ---- Transcript
                 3zyb J 301 KPLx 304
                               |
                               |
                             304-NH2


Chain N from PDB  Type:PROTEIN  Length:4
                                    
               SCOP domains ---- SCOP domains
               CATH domains ---- CATH domains
               Pfam domains ---- Pfam domains
         Sec.struct. author .... Sec.struct. author
                 SAPs(SNPs) ---- SAPs(SNPs)
                    PROSITE ---- PROSITE
                 Transcript ---- Transcript
                 3zyb N 301 KPLx 304
                               |
                               |
                             304-NH2
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 3ZYB)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 3ZYB)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 3ZYB)

(-) Gene Ontology  (5, 5)

Asymmetric Unit(hide GO term definitions)
Chain A,B,C,D,E,F,G,H   (PA1L_PSEAE | Q05097)
molecular function
    GO:0030246    carbohydrate binding    Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates.
biological process
    GO:0007157    heterophilic cell-cell adhesion via plasma membrane cell adhesion molecules    The attachment of an adhesion molecule in one cell to a nonidentical adhesion molecule in an adjacent cell.
cellular component
    GO:0009986    cell surface    The external part of the cell wall and/or plasma membrane.
    GO:0005737    cytoplasm    All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
    GO:0042597    periplasmic space    The region between the inner (cytoplasmic) and outer membrane (Gram-negative Bacteria) or cytoplasmic membrane and cell wall (Fungi and Gram-positive Bacteria).

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  3zyb
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  PA1L_PSEAE | Q05097
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  PA1L_PSEAE | Q05097
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        PA1L_PSEAE | Q05097: 1l7l 1oko 1uoj 2vxj 2wyf 3zyf 3zyh 4a6s 4al9 4cp9 4cpb 4ljh 4lk6 4lk7 4lkd 4lke 4lkf 4yw6 4yw7 4ywa 5d21

(-) Related Entries Specified in the PDB File

1l7l CRYSTAL STRUCTURE OF PSEUDOMONAS AERUGINOSA LECTIN 1 DETERMINED BY SINGLE WAVELENGTH ANOMALOUS SCATTERING PHASING METHOD
1oko CRYSTAL STRUCTURE OF PSEUDOMONAS AERUGINOSA LECTIN 1 COMPLEXED WITH GALACTOSE AT 1.6 A RESOLUTION
1uoj CRYSTAL STRUCTURE OF PSEUDOMONAS AERUGINOSA LECTIN 1 IN THE CALCIUM- FREE STATE
2vxj CRYSTAL STRUCTURE OF PA-IL LECTIN COMPLEXED WITH AGAL13BGAL14GLC AT 1.9 A RESOLUTION
2wyf CRYSTAL STRUCTURE OF PA-IL LECTIN COMPLEXED WITH AGAL12BGAL-O-MET AT 2.4 A RESOLUTION
3zyf CRYSTAL STRUCTURE OF PA-IL LECTIN COMPLEXED WITH NPG AT 1.9 A RESOLUTION
3zyh CRYSTAL STRUCTURE OF PA-IL LECTIN COMPLEXED WITH GALBG0 AT 1.5 A RESOLUTION