5UQY - JenaLib

Title :   CRYSTAL STRUCTURE OF MARBURG VIRUS GP IN COMPLEX WITH THE HUMAN SURVIVOR ANTIBODY MR78

Authors :   T. Hashiguchi, M. L. Fusco, K. M. Hastie, Z. A. Bomholdt, J. E. Lee, A. I. F R. Matsuoka, D. Kohda, Y. Yanagi, M. Hammel, J. E. Crowe, E. O. Saphire

Date :   08 Feb 17 (Deposition) - 01 Mar 17 (Release) - 01 Mar 17 (Revision)

Method :   X-RAY DIFFRACTION

Resolution :   3.60

Chains :   Asym. Unit : A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P
Biol. Unit 1: A,B,C,D  (3x)
Biol. Unit 2: E,F,G,H,I,J,K,L,M,N,O,P  (1x)

Keywords :   Glycoprotein, Viral Protein, Antibody, Fab, Viral Protein-Immune System Complex (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   T. Hashiguchi, M. L. Fusco, Z. A. Bornholdt, J. E. Lee, A. I. Flyak, R. Matsuoka, D. Kohda, Y. Yanagi, M. Hammel, J. E. Crowe, E. O. Saphire
Structural Basis For Marburg Virus Neutralization By A Cross-Reactive Human Antibody.
Cell V. 160 904 2015
PubMed-ID: 25723165 | Reference-DOI: 10.1016/J.CELL.2015.01.041

Compounds

Molecule 1 - ENVELOPE GLYCOPROTEIN GP1
	Chains	:	A, E, I, M
	Engineered	:	YES
	Expression System	:	DROSOPHILA
	Expression System Cell Line	:	S2
	Expression System Plasmid	:	PMT
	Expression System Taxid	:	7215
	Expression System Vector Type	:	BACULOVIRUS
	Fragment	:	UNP RESIDUES 17-256, 426-435
	Gene	:	GP
	Organism Common	:	MARV
	Organism Scientific	:	LAKE VICTORIA MARBURGVIRUS (STRAIN RAVN-87)
	Organism Taxid	:	378809
	Strain	:	RAVN-87
	Synonym	:	GP1,2,GP,VIRION SPIKE GLYCOPROTEIN,GP1,2,GP,VIRION SPIKE GLYCOPROTEIN

Molecule 2 - ENVELOPE GLYCOPROTEIN GP2
	Chains	:	B, F, J, N
	Engineered	:	YES
	Expression System	:	DROSOPHILA
	Expression System Cell Line	:	S2
	Expression System Plasmid	:	PMT
	Expression System Taxid	:	7215
	Expression System Vector Type	:	BACULOVIRUS
	Fragment	:	UNP RESIDUES 436-637
	Gene	:	GP
	Organism Common	:	MARV
	Organism Scientific	:	LAKE VICTORIA MARBURGVIRUS (STRAIN RAVN-87)
	Organism Taxid	:	378809
	Strain	:	RAVN-87
	Synonym	:	GP1,2,GP,VIRION SPIKE GLYCOPROTEIN

Molecule 3 - MR78 FAB LIGHT CHAIN
	Cell	:	HYBRIDOMA
	Chains	:	C, G, K, O
	Organism Common	:	HUMAN
	Organism Scientific	:	HOMO SAPIENS
	Organism Taxid	:	9606

Molecule 4 - MR78 FAB HEAVY CHAIN
	Cell	:	HYBRIDOMA
	Chains	:	D, H, L, P
	Organism Common	:	HUMAN
	Organism Scientific	:	HOMO SAPIENS
	Organism Taxid	:	9606

Structural Features

Chains, Units

		1	2	3	4	5	6	7	8	9	10	11	12	13	14	15	16
Asymmetric Unit	:	A	B	C	D	E	F	G	H	I	J	K	L	M	N	O	P
Biological Unit 1 (3x)	:	A	B	C	D
Biological Unit 2 (1x)	:					E	F	G	H	I	J	K	L	M	N	O	P

Summary Information (see also Sequences/Alignments below)

Ligands, Modified Residues, Ions (3, 40)

Asymmetric Unit (3, 40)

No.	Name	Count	Type	Full Name
1	BMA	5	Ligand/Ion	BETA-D-MANNOSE
2	MAN	12	Ligand/Ion	ALPHA-D-MANNOSE
3	NAG	23	Ligand/Ion	N-ACETYL-D-GLUCOSAMINE

Biological Unit 1 (3, 30)

No.	Name	Count	Type	Full Name
1	BMA	3	Ligand/Ion	BETA-D-MANNOSE
2	MAN	9	Ligand/Ion	ALPHA-D-MANNOSE
3	NAG	18	Ligand/Ion	N-ACETYL-D-GLUCOSAMINE

Biological Unit 2 (3, 30)

No.	Name	Count	Type	Full Name
1	BMA	4	Ligand/Ion	BETA-D-MANNOSE
2	MAN	9	Ligand/Ion	ALPHA-D-MANNOSE
3	NAG	17	Ligand/Ion	N-ACETYL-D-GLUCOSAMINE

Sites (14, 14)

Asymmetric Unit (14, 14)

No.	Name	Evidence	Residues	Description
01	AC1	SOFTWARE	NAG I:302 , BMA I:303	binding site for residue MAN I 305
02	AC2	SOFTWARE	BMA N:703	binding site for residue MAN M 305
03	AC3	SOFTWARE	ASN A:94 , HIS A:124	binding site for Poly-Saccharide residues NAG A 301 through NAG A 302 bound to ASN A 94
04	AC4	SOFTWARE	ASN A:171 , THR A:173 , ASN B:475 , THR B:476	binding site for Poly-Saccharide residues NAG A 303 through NAG A 304 bound to ASN A 171
05	AC5	SOFTWARE	GLN A:57 , TRP A:140 , ASN A:164 , ASN B:564	binding site for Poly-Saccharide residues NAG B 701 through MAN B 706 bound to ASN B 564
06	AC6	SOFTWARE	ASN E:94 , HIS E:124	binding site for Poly-Saccharide residues NAG E 301 through NAG E 302 bound to ASN E 94
07	AC7	SOFTWARE	ASN E:171 , THR E:173	binding site for Mono-Saccharide NAG E 303 bound to ASN E 171
08	AC8	SOFTWARE	GLU C:187 , GLN E:57 , TRP E:140 , ASN E:164 , ASN F:564 , TRP J:532 , PHE J:536	binding site for Poly-Saccharide residues NAG F 701 through MAN F 706 bound to ASN F 564
09	AC9	SOFTWARE	ASN I:94 , HIS I:124 , MAN I:305	binding site for Poly-Saccharide residues NAG I 301 through MAN I 304 bound to ASN I 94
10	AD1	SOFTWARE	GLN I:42 , ASN I:171 , ASN J:475 , THR J:476	binding site for Poly-Saccharide residues NAG I 306 through NAG I 307 bound to ASN I 171
11	AD2	SOFTWARE	GLN I:57 , TRP I:140 , ASN I:164 , ASN J:564 , TRP N:532	binding site for Poly-Saccharide residues NAG J 701 through MAN J 704 bound to ASN J 564
12	AD3	SOFTWARE	ASN M:94 , HIS M:124	binding site for Poly-Saccharide residues NAG M 301 through NAG M 302 bound to ASN M 94
13	AD4	SOFTWARE	GLN M:42 , ASN M:171 , THR M:173 , ASN N:475 , THR N:476	binding site for Poly-Saccharide residues NAG M 303 through NAG M 304 bound to ASN M 171
14	AD5	SOFTWARE	TRP F:532 , PHE F:536 , GLN M:57 , TRP M:140 , MAN M:305 , ASN N:564	binding site for Poly-Saccharide residues NAG N 701 through MAN N 705 bound to ASN N 564

SS Bonds (26, 26)

Asymmetric Unit

No.	Residues
1	A:37	-	B:610
2	A:92	-	A:119
3	B:512	-	B:557
4	B:602	-	B:609
5	C:23	-	C:88
6	C:134	-	C:194
7	D:22	-	D:97
8	D:152	-	D:208
9	E:92	-	E:119
10	F:512	-	F:557
11	G:23	-	G:88
12	G:134	-	G:194
13	H:22	-	H:97
14	H:152	-	H:208
15	I:92	-	I:119
16	J:512	-	J:557
17	K:23	-	K:88
18	K:134	-	K:194
19	L:22	-	L:97
20	L:152	-	L:208
21	M:92	-	M:119
22	N:512	-	N:557
23	O:23	-	O:88
24	O:134	-	O:194
25	P:22	-	P:97
26	P:152	-	P:208

Cis Peptide Bonds (16, 16)

Asymmetric Unit

No.	Residues
1	Ser C:7	-	Pro C:8
2	Tyr C:140	-	Pro C:141
3	Phe D:158	-	Pro D:159
4	Glu D:160	-	Pro D:161
5	Ser G:7	-	Pro G:8
6	Tyr G:140	-	Pro G:141
7	Phe H:158	-	Pro H:159
8	Glu H:160	-	Pro H:161
9	Ser K:7	-	Pro K:8
10	Tyr K:140	-	Pro K:141
11	Phe L:158	-	Pro L:159
12	Glu L:160	-	Pro L:161
13	Ser O:7	-	Pro O:8
14	Tyr O:140	-	Pro O:141
15	Phe P:158	-	Pro P:159
16	Glu P:160	-	Pro P:161

Sequence-Structure Mapping

SAPs(SNPs)/Variants (0, 0)

PROSITE Motifs (0, 0)

Exons (0, 0)

Sequences/Alignments

Asymmetric Unit

Reformat:	Number of residues per line = ('0' or empty: single-line sequence representation)
	Number of residues per labelling interval =
	UniProt sequence: complete aligned part

Show mapping:	SCOP domains	CATH domains	Pfam domains	Secondary structure (by author)
	SAPs(SNPs)	PROSITE motifs	Exons
	(details for a mapped element are shown in a popup box when the mouse pointer rests over it)

Chain A from PDB  Type:PROTEIN  Length:145
                                                                                                                                                                                 
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...........eeeeeee........hhhhhhh.eeee......eee..eee.eeeeeeeeee....................eeeeeeeeee......eeee....eeee..eee.........eeeeeeeee.hhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5uqy A  36 VCSGTLQKTEDVHLMGFTLSGQKVADSPLEASKRWAFRTGVPPKNVEYTEGEEAKTCYNISVTDPSGKSLLLDPPSNIRDYPKCKTVHHIQGQNPHAQGIALHLWGAFFLYDRVASTTMYRGKVFTEGNIAAMIVNKTVHRMIFS 180
                                    45        55        65        75        85        95       105       115       125       135       145       155       165       175

Chain B from PDB  Type:PROTEIN  Length:127
                                                                                                                                                               
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eee.....eee............eeee.....................eeee.....hhhhhhhhhhhhhhhhhhhhhhhh.......hhhhhhhhhhhhhh...............hhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5uqy B 471 SPSFNTSTNISLTFSYFPDNDCDAELRIWSVQEDDGLSWIPFFGPGIEGLYTAGLIKNQNNLVCRLRRLANQTAKSLELLLRVTTEERTFSLINRHAIDFLLTRWGTCKVLGPDCCIGIEDLSKNIS 621
                                   488       510       520    || 533       543       553       563       573       583       593     ||604       614       
                                  479|      497|            525|                                                                   599|                    
                                   488       510             529                                                                    601

Chain C from PDB  Type:PROTEIN  Length:210
                                                                                                                                                                                                                                                  
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ...eee..eee......eeeeee.........eeeee......eeeee...ee.......eeeeee..eeeeee...hhhhh.eeeeeeee..eeee...eeee........eeeee..hhhhhhhheeeeeeeeeee....eeeeeee...ee...eeeee.........eeeeeeeeeehhhhhh...eeeeeee......eeeee.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 5uqy C   2 IQMTQSPSSLSASVGDRVTITCQASQVISNYLNWYQQKPGKAPKLLIYDTSNLKTGVPSRFSGSGSGTDFTFTISSLQPEDIATYYCQQYENLQFTFGPGTKVDIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLRSPVTKSFNR 211
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211

Chain D from PDB  Type:PROTEIN  Length:218
                                                                                                                                                                                                                                                          
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeee...ee.....eeeeeeee........eeeeeeee......eeeeee.....eee.......eeeeee....eeeeee...hhhhheeeeeeeeeee.....eeeeeee...eeeee........eeeee...eeeeeeeeee.....eeee.hhh....eee...ee.....eeeeeeeee..hhhhhh.eeeeeee....eeeeeee... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5uqy D   1 QLQLQESGPGLVKPSETLSLTCTVSGGSISSSSYYWGWIRQPPGKGLEWIGSVYYSGGASYNPSLKSRATISVDTSKNQFSLNLDSVSAADTAIYYCASIYGSGTFYYYFYMDVWGKGSTVTVSSASTKGPSVFPLAPTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK 226
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       148       158       168       178       188       198       208       218        
                                                                                                                                                                   138|                                                                               
                                                                                                                                                                    147

Chain E from PDB  Type:PROTEIN  Length:144
                                                                                                                                                                                
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ..........eeeeeee........hhhhhhh.eeee......eee..eee.eeeeeeeeee....................eeeeeeeeee......eeee....eeee..eee.........eeeeeeeee.hhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 5uqy E  37 CSGTLQKTEDVHLMGFTLSGQKVADSPLEASKRWAFRTGVPPKNVEYTEGEEAKTCYNISVTDPSGKSLLLDPPSNIRDYPKCKTVHHIQGQNPHAQGIALHLWGAFFLYDRVASTTMYRGKVFTEGNIAAMIVNKTVHRMIFS 180
                                    46        56        66        76        86        96       106       116       126       136       146       156       166       176

Chain F from PDB  Type:PROTEIN  Length:94
                                                                                                                              
               SCOP domains ---------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...ee..ee.......eeeee...................eeeee....hhhhhhhhhhhhhhhhhhhhhhhh.......hhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------- Transcript
                 5uqy F 471 SPSFNTLTFSNDCDAELRIWSVQEGLSWIPFFGPGIEGLYTAGLIKNQNNLVCRLRRLANQTAKSLELLLRVTTEERTFSLINRHAIDFLLTRW 598
                                 ||493|      519   ||  534       544       554       564       574       584       594    
                               476|  ||          523|                                                                     
                                490  ||           529                                                                     
                                   493|                                                                                   
                                    510

Chain G from PDB  Type:PROTEIN  Length:210
                                                                                                                                                                                                                                                  
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ...eee..eee......eeeeee.........eeeee......eeee.............eeeeee..eeeeee...hhhhh.eeeeeeee..eeee...eeee........eeeee..hhhhhhhheeeeeeeeeee.....eeeeee........eeeee.........eeeeeeeeeehhhhhh...eeeeee.......eeeee.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 5uqy G   2 IQMTQSPSSLSASVGDRVTITCQASQVISNYLNWYQQKPGKAPKLLIYDTSNLKTGVPSRFSGSGSGTDFTFTISSLQPEDIATYYCQQYENLQFTFGPGTKVDIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLRSPVTKSFNR 211
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211

Chain H from PDB  Type:PROTEIN  Length:220
                                                                                                                                                                                                                                                            
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeee...ee.....eeeeeeee........eeeeeeee......eeeeee.....eee.......eeeeee....eeeeee...hhhhheeeeeeeeeee.....eeeeeee...eeeee........eeeee....eeeeeeeeeee.....eeee.hhh....eee...ee.....eeeeeeeeee.hhhhhh.eeeeeeehhhheeeeeee... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5uqy H   1 QLQLQESGPGLVKPSETLSLTCTVSGGSISSSSYYWGWIRQPPGKGLEWIGSVYYSGGASYNPSLKSRATISVDTSKNQFSLNLDSVSAADTAIYYCASIYGSGTFYYYFYMDVWGKGSTVTVSSASTKGPSVFPLAPSGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK 226
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       146       156       166       176       186       196       206       216       226
                                                                                                                                                                    139|                                                                                
                                                                                                                                                                     146

Chain I from PDB  Type:PROTEIN  Length:142
                                                                                                                                                                              
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ........eeeeeee........hhhhhhh.eeee......eee..eee.eeeeeeeeee....................eeeeeeeeee......eeee....eeee..eee.........eeeeeeeee.hhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5uqy I  39 GTLQKTEDVHLMGFTLSGQKVADSPLEASKRWAFRTGVPPKNVEYTEGEEAKTCYNISVTDPSGKSLLLDPPSNIRDYPKCKTVHHIQGQNPHAQGIALHLWGAFFLYDRVASTTMYRGKVFTEGNIAAMIVNKTVHRMIFS 180
                                    48        58        68        78        88        98       108       118       128       138       148       158       168       178

Chain J from PDB  Type:PROTEIN  Length:97
                                                                                                                                 
               SCOP domains ------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...ee...ee........eeee.....................eeee.....hhhhhhhhhhhhhhhhhhhhhhhh.......hhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------- Transcript
                 5uqy J 471 SPSFNTSLTFSNDCDAELRIWSVQEDDGLSWIPFFGPGIEGLYTAGLIKNQNNLVCRLRRLANQTAKSLELLLRVTTEERTFSLINRHAIDFLLTRW 598
                                 ||492||     518      |531       541       551       561       571       581       591       
                               476| 493|            525|                                                                     
                                489  510             529

Chain K from PDB  Type:PROTEIN  Length:210
                                                                                                                                                                                                                                                  
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ...eee..eeeee....eeeeee.........eeeee......eeeee...ee.......eeeeee..eeeeee...hhhhh.eeeeeeee..eeee...eeeeee......eeeee..hhhhhhhheeeeeeeeeee.....eeeeee........eeeee.........eeeeeeeeeehhhhhh...eeeeee.......eeeee.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 5uqy K   2 IQMTQSPSSLSASVGDRVTITCQASQVISNYLNWYQQKPGKAPKLLIYDTSNLKTGVPSRFSGSGSGTDFTFTISSLQPEDIATYYCQQYENLQFTFGPGTKVDIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLRSPVTKSFNR 211
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211

Chain L from PDB  Type:PROTEIN  Length:222
                                                                                                                                                                                                                                                              
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ..eeeee...ee.....eeeeeeee........eeeeeeee......eeeeee.....eee.......eeeeee....eeeeee...hhhhheeeeeeeeeee.....eeeeeee...eeeee........eeeee......eeeeeeeeeee.....eeee.hhh....eee...ee.....eeeeeeeeee.hhhhhh.eeeeeee....eeeeeee... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 5uqy L   1 QLQLQESGPGLVKPSETLSLTCTVSGGSISSSSYYWGWIRQPPGKGLEWIGSVYYSGGASYNPSLKSRATISVDTSKNQFSLNLDSVSAADTAIYYCASIYGSGTFYYYFYMDVWGKGSTVTVSSASTKGPSVFPLAPSSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK 226
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       144       154       164       174       184       194       204       214       224  
                                                                                                                                                                    139|                                                                                  
                                                                                                                                                                     144

Chain M from PDB  Type:PROTEIN  Length:142
                                                                                                                                                                              
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ........eeeeeee........hhhhhhh.eeee......eee..eee.eeeeeeeeee....................eeeeeeeeee......eeee....eeee..eee.........eeeeeeeee.hhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5uqy M  39 GTLQKTEDVHLMGFTLSGQKVADSPLEASKRWAFRTGVPPKNVEYTEGEEAKTCYNISVTDPSGKSLLLDPPSNIRDYPKCKTVHHIQGQNPHAQGIALHLWGAFFLYDRVASTTMYRGKVFTEGNIAAMIVNKTVHRMIFS 180
                                    48        58        68        78        88        98       108       118       128       138       148       158       168       178

Chain N from PDB  Type:PROTEIN  Length:92
                                                                                                                            
               SCOP domains -------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...ee..ee......eeeee.................eeeee....hhhhhhhhhhhhhhhhhhhhhhhh.......hhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------- Transcript
                 5uqy N 471 SPSFNTLTFSDCDAELRIWSVGLSWIPFFGPGIEGLYTAGLIKNQNNLVCRLRRLANQTAKSLELLLRVTTEERTFSLINRHAIDFLLTRWG 599
                                 ||493|      520||     537       547       557       567       577       587       597  
                               476|  ||       521|                                                                      
                                490  ||        529                                                                      
                                   493|                                                                                 
                                    511

Chain O from PDB  Type:PROTEIN  Length:210
                                                                                                                                                                                                                                                  
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ...eee..eeeee....eeeeee.........eeeee......eeeee...ee.......eeeeee..eeeeee...hhhhh.eeeeeeee..eeee...eeeeee......eeeee..hhhhhhhheeeeeeeeeee.....eeeeee........eeeee.........eeeeeeeeeehhhhhh...eeeeee........eeee.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 5uqy O   2 IQMTQSPSSLSASVGDRVTITCQASQVISNYLNWYQQKPGKAPKLLIYDTSNLKTGVPSRFSGSGSGTDFTFTISSLQPEDIATYYCQQYENLQFTFGPGTKVDIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLRSPVTKSFNR 211
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211

Chain P from PDB  Type:PROTEIN  Length:211
                                                                                                                                                                                                                                                   
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeee...ee.....eeeeeeee........eeeeeeee......eeeeee.....eee.......eeeeee....eeeeee...hhhhheeeeeeeeeee.....eeeeeee...eeeee........eee...eeeee.....eeee.hhh....eee...ee.....eeeeeee....hhhhhh.eeeeeee....eeeeeee... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5uqy P   1 QLQLQESGPGLVKPSETLSLTCTVSGGSISSSSYYWGWIRQPPGKGLEWIGSVYYSGGASYNPSLKSRATISVDTSKNQFSLNLDSVSAADTAIYYCASIYGSGTFYYYFYMDVWGKGSTVTVSSASTKGPSVFPLCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK 226
                                    10        20        30        40        50        60        70        80        90       100       110       120       130     ||155       165       175       185       195       205       215       225 
                                                                                                                                                                 136|                                                                          
                                                                                                                                                                  152

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Description

Compounds

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Ligands, Modified Residues, Ions (3, 40)

Sites (14, 14)

SS Bonds (26, 26)

Cis Peptide Bonds (16, 16)

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