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(-) Description

Title :  CRYSTAL STRUCTURE OF VPA0735 FROM VIBRIO PARAHAEMOLYTICUS IN MONOCLINIC FORM, NORTHEAST STRUCTURAL GENOMICS TARGET VPR109
 
Authors :  J. Seetharaman, H. Neely, K. Cunningham, C. Ciccosanti, S. Bjelic, T. B R. Xiao, J. K. Everett, G. T. Montelione, L. Tong, J. F. Hunt, Northeast Structural Genomics Consortium (Nesg)
Date :  31 Dec 11  (Deposition) - 23 May 12  (Release) - 23 May 12  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.10
Chains :  Asym. Unit :  A,B,C,D
Biol. Unit 1:  A,B  (1x)
Biol. Unit 2:  C,D  (1x)
Keywords :  Structural Genomics, Psi-Biology, Northeast Structural Genomics Consortium, Nesg, Unknown Function (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  J. Seetharaman, H. Neely, K. Cunningham, C. Ciccosanti, S. Bjelic, T. B. Acton, R. Xiao, J. K. Everett, G. T. Montelione, L. Tong, J. F. Hunt
Crystal Structure Of Vpa0735 From Vibrio Parahaemolyticus I Monoclinic Form, Northeast Structural Genomics Target Vpr10
To Be Published
PubMed: search

(-) Compounds

Molecule 1 - UNCHARACTERIZED PROTEIN VPA0735
    Chains: A, B, C, D
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Taxid: 562
    Gene: VPA0735
    Organism Scientific: VIBRIO PARAHAEMOLYTICUS
    Organism Taxid: 670

 Structural Features

(-) Chains, Units

  1234
Asymmetric Unit : ABCD
Biological Unit 1 (1x): AB  
Biological Unit 2 (1x):   CD

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (2, 63)

Asymmetric Unit (2, 63)
No.NameCountTypeFull Name
1MG7Ligand/IonMAGNESIUM ION
2MSE56Mod. Amino AcidSELENOMETHIONINE
Biological Unit 1 (1, 28)
No.NameCountTypeFull Name
1MG-1Ligand/IonMAGNESIUM ION
2MSE28Mod. Amino AcidSELENOMETHIONINE
Biological Unit 2 (1, 28)
No.NameCountTypeFull Name
1MG-1Ligand/IonMAGNESIUM ION
2MSE28Mod. Amino AcidSELENOMETHIONINE

(-) Sites  (7, 7)

Asymmetric Unit (7, 7)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREARG A:191 , SER A:349 , MSE A:352 , GLN A:361 , HOH A:736BINDING SITE FOR RESIDUE MG A 501
2AC2SOFTWARETYR A:109 , ARG A:191 , TYR A:463BINDING SITE FOR RESIDUE MG A 502
3AC3SOFTWAREGLY B:133 , ARG B:191 , SER B:349 , MSE B:352 , GLN B:361BINDING SITE FOR RESIDUE MG B 501
4AC4SOFTWAREASN B:104 , TYR B:109 , ARG B:191 , TYR B:363 , PHE B:460BINDING SITE FOR RESIDUE MG B 502
5AC5SOFTWAREARG C:191 , SER C:349 , MSE C:352 , GLN C:361BINDING SITE FOR RESIDUE MG C 501
6AC6SOFTWAREGLY D:133 , MSE D:134 , ARG D:191 , SER D:349 , GLN D:361BINDING SITE FOR RESIDUE MG D 501
7AC7SOFTWAREASN D:104 , TYR D:109 , ARG D:191 , TYR D:363 , ARG D:461 , TYR D:463BINDING SITE FOR RESIDUE MG D 502

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 3VB9)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 3VB9)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 3VB9)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 3VB9)

(-) Exons   (0, 0)

(no "Exon" information available for 3VB9)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:460
 aligned with Q87I71_VIBPA | Q87I71 from UniProtKB/TrEMBL  Length:483

    Alignment length:460
                                    32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302       312       322       332       342       352       362       372       382       392       402       412       422       432       442       452       462       472       482
         Q87I71_VIBPA    23 ETVVPSRVGDLKFESDFPTQETMKNMLNEMDFQRATQAYLWGIPASSIMEWLNVSRNDFKFEEGQMGFFNTLKQKQGIITANFTTPYVIGTWNLEKTGPLIINLPEAKMAGMMLDVHQRVLSDLSLLGPDKGKGGKYLIVPPGEKYKDLNPKGYYVIRPKTNVVYGGIRILEPDVDRVVKQVVPNITTQPYADGKLGRKIPVAQVPEIDWTHIPKDGLEYWKTIHQIIQENPVEERDRFVMAQLKFLGIEKGKPFNPTEEQKKILLEASKVGRAMAQSNDYTKRFTQPYWKGTNWKDAISVSLDQRSENYDELDERAAWFYEAITVSRGMKSTIPGFGQRYLVTYQDSDGNWLSGEHTYKLHVPANVPASNFWSTTVYDENNRLMIINDAGSPDISSRKNLKVNSDGSIDVYYGPKPVKGYENNWVQTNPGEGWFTYFRFYGPTEKMFDKSWTMGDIELV 482
               SCOP domains d3vb9a_ A: Hypothetical protein VPA0735                                                                                                                                                                                                                                                                                                                                                                                                                                      SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eee......eeee..eehhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh........eee.hhhhhh..........eeeeeeehhhhh.eeeee....eeeeee.....eeeeee.........eeeee...hhhhh.......eee.....eeeeeeee...hhhhhhhhhh...eeeeee..ee...ee.ee...........hhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhh.........hhhhhhhhhhhhhhhhhhhhhhhhhh............ee..............hhhhhhhhhhhh...hhhhh.......eeeeee..............eeeee.....eeeeeeeeeee..............eee............eeeeee......hhh.eee......eeeeeeeeeehhhhhh........ee. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3vb9 A  23 ETVVPSRVGDLKFESDFPTQETmKNmLNEmDFQRATQAYLWGIPASSImEWLNVSRNDFKFEEGQmGFFNTLKQKQGIITANFTTPYVIGTWNLEKTGPLIINLPEAKmAGmmLDVHQRVLSDLSLLGPDKGKGGKYLIVPPGEKYKDLNPKGYYVIRPKTNVVYGGIRILEPDVDRVVKQVVPNITTQPYADGKLGRKIPVAQVPEIDWTHIPKDGLEYWKTIHQIIQENPVEERDRFVmAQLKFLGIEKGKPFNPTEEQKKILLEASKVGRAmAQSNDYTKRFTQPYWKGTNWKDAISVSLDQRSENYDELDERAAWFYEAITVSRGmKSTIPGFGQRYLVTYQDSDGNWLSGEHTYKLHVPANVPASNFWSTTVYDENNRLmIINDAGSPDISSRKNLKVNSDGSIDVYYGPKPVKGYENNWVQTNPGEGWFTYFRFYGPTEKmFDKSWTmGDIELV 482
                                    32        42  |  |  52        62        72        82     |  92       102       112       122       132 ||    142       152       162       172       182       192       202       212       222       232       242       252       262|      272       282       292    |  302       312       322       332       342       352       362       372       382       392       402    |  412       422       432       442       452       462      |472   |   482
                                                 45-MSE  |                 71-MSE           88-MSE                                    131-MSE                                                                                                                             263-MSE                           297-MSE                                                352-MSE                                                407-MSE                                                       469-MSE  |      
                                                    48-MSE                                                                               134-MSE                                                                                                                                                                                                                                                                                                                                               476-MSE  
                                                        52-MSE                                                                            135-MSE                                                                                                                                                                                                                                                                                                                                                       


Chain B from PDB  Type:PROTEIN  Length:462
 aligned with Q87I71_VIBPA | Q87I71 from UniProtKB/TrEMBL  Length:483

    Alignment length:462
                                    31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391       401       411       421       431       441       451       461       471       481  
         Q87I71_VIBPA    22 QETVVPSRVGDLKFESDFPTQETMKNMLNEMDFQRATQAYLWGIPASSIMEWLNVSRNDFKFEEGQMGFFNTLKQKQGIITANFTTPYVIGTWNLEKTGPLIINLPEAKMAGMMLDVHQRVLSDLSLLGPDKGKGGKYLIVPPGEKYKDLNPKGYYVIRPKTNVVYGGIRILEPDVDRVVKQVVPNITTQPYADGKLGRKIPVAQVPEIDWTHIPKDGLEYWKTIHQIIQENPVEERDRFVMAQLKFLGIEKGKPFNPTEEQKKILLEASKVGRAMAQSNDYTKRFTQPYWKGTNWKDAISVSLDQRSENYDELDERAAWFYEAITVSRGMKSTIPGFGQRYLVTYQDSDGNWLSGEHTYKLHVPANVPASNFWSTTVYDENNRLMIINDAGSPDISSRKNLKVNSDGSIDVYYGPKPVKGYENNWVQTNPGEGWFTYFRFYGPTEKMFDKSWTMGDIELVK 483
               SCOP domains d3vb9b_ B: Hypothetical protein VPA0735                                                                                                                                                                                                                                                                                                                                                                                                                                        SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .eeee......eeee..eehhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh........eee.hhhhhh..........eeeeeeehhhhh.eeeee....eeeeee.....eeeeee.........eeeee...hhhhhhh.....eee.....eeeeeeee...hhhhhhhhhh...eeeeee..ee...ee.ee...........hhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhh.........hhhhhhhhhhhhhhhhhhhhhhhhhh............ee..............hhhhhhhhhhhh....hhhhh......eeeeee.............eeeeee........eeeeeeee..............eee...........eeeeee..........eee......eeeeeeee..hhhhhh........eeee. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 3vb9 B  22 QETVVPSRVGDLKFESDFPTQETmKNmLNEmDFQRATQAYLWGIPASSImEWLNVSRNDFKFEEGQmGFFNTLKQKQGIITANFTTPYVIGTWNLEKTGPLIINLPEAKmAGmmLDVHQRVLSDLSLLGPDKGKGGKYLIVPPGEKYKDLNPKGYYVIRPKTNVVYGGIRILEPDVDRVVKQVVPNITTQPYADGKLGRKIPVAQVPEIDWTHIPKDGLEYWKTIHQIIQENPVEERDRFVmAQLKFLGIEKGKPFNPTEEQKKILLEASKVGRAmAQSNDYTKRFTQPYWKGTNWKDAISVSLDQRSENYDELDERAAWFYEAITVSRGmKSTIPGFGQRYLVTYQDSDGNWLSGEHTYKLHVPANVPASNFWSTTVYDENNRLmIINDAGSPDISSRKNLKVNSDGSIDVYYGPKPVKGYENNWVQTNPGEGWFTYFRFYGPTEKmFDKSWTmGDIELVK 483
                                    31        41   |  | 51|       61        71        81      | 91       101       111       121       131  ||   141       151       161       171       181       191       201       211       221       231       241       251       261 |     271       281       291     | 301       311       321       331       341       351|      361       371       381       391       401     | 411       421       431       441       451       461       471    |  481  
                                                  45-MSE  |                 71-MSE           88-MSE                                    131-MSE                                                                                                                             263-MSE                           297-MSE                                                352-MSE                                                407-MSE                                                       469-MSE  |       
                                                     48-MSE                                                                               134-MSE                                                                                                                                                                                                                                                                                                                                               476-MSE   
                                                         52-MSE                                                                            135-MSE                                                                                                                                                                                                                                                                                                                                                        


Chain C from PDB  Type:PROTEIN  Length:460
 aligned with Q87I71_VIBPA | Q87I71 from UniProtKB/TrEMBL  Length:483

    Alignment length:460
                                    32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302       312       322       332       342       352       362       372       382       392       402       412       422       432       442       452       462       472       482
         Q87I71_VIBPA    23 ETVVPSRVGDLKFESDFPTQETMKNMLNEMDFQRATQAYLWGIPASSIMEWLNVSRNDFKFEEGQMGFFNTLKQKQGIITANFTTPYVIGTWNLEKTGPLIINLPEAKMAGMMLDVHQRVLSDLSLLGPDKGKGGKYLIVPPGEKYKDLNPKGYYVIRPKTNVVYGGIRILEPDVDRVVKQVVPNITTQPYADGKLGRKIPVAQVPEIDWTHIPKDGLEYWKTIHQIIQENPVEERDRFVMAQLKFLGIEKGKPFNPTEEQKKILLEASKVGRAMAQSNDYTKRFTQPYWKGTNWKDAISVSLDQRSENYDELDERAAWFYEAITVSRGMKSTIPGFGQRYLVTYQDSDGNWLSGEHTYKLHVPANVPASNFWSTTVYDENNRLMIINDAGSPDISSRKNLKVNSDGSIDVYYGPKPVKGYENNWVQTNPGEGWFTYFRFYGPTEKMFDKSWTMGDIELV 482
               SCOP domains d3vb9c_ C: Hypothetical protein VPA0735                                                                                                                                                                                                                                                                                                                                                                                                                                      SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eee......eeee..eehhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.......eeee.hhhhhh..........eeeeeeehhhhh.eeeee....eeeeee.....eeeeee.........eeeee...hhhhh.......eee.....eeeeeeee...hhhhhhhhhh...eeeeee..ee...ee.ee...........hhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhh.........hhhhhhhhhhhhhhhhhhhhhhhhhh............ee..............hhhhhhhhhhhh....hhhhh......eeeeee..............eeeee.....eeeeeeeeeee..............eee............eeeeee......hhh.eee......eeeeeeeeeehhhhhh........ee. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3vb9 C  23 ETVVPSRVGDLKFESDFPTQETmKNmLNEmDFQRATQAYLWGIPASSImEWLNVSRNDFKFEEGQmGFFNTLKQKQGIITANFTTPYVIGTWNLEKTGPLIINLPEAKmAGmmLDVHQRVLSDLSLLGPDKGKGGKYLIVPPGEKYKDLNPKGYYVIRPKTNVVYGGIRILEPDVDRVVKQVVPNITTQPYADGKLGRKIPVAQVPEIDWTHIPKDGLEYWKTIHQIIQENPVEERDRFVmAQLKFLGIEKGKPFNPTEEQKKILLEASKVGRAmAQSNDYTKRFTQPYWKGTNWKDAISVSLDQRSENYDELDERAAWFYEAITVSRGmKSTIPGFGQRYLVTYQDSDGNWLSGEHTYKLHVPANVPASNFWSTTVYDENNRLmIINDAGSPDISSRKNLKVNSDGSIDVYYGPKPVKGYENNWVQTNPGEGWFTYFRFYGPTEKmFDKSWTmGDIELV 482
                                    32        42  |  |  52        62        72        82     |  92       102       112       122       132 ||    142       152       162       172       182       192       202       212       222       232       242       252       262|      272       282       292    |  302       312       322       332       342       352       362       372       382       392       402    |  412       422       432       442       452       462      |472   |   482
                                                 45-MSE  |                 71-MSE           88-MSE                                    131-MSE                                                                                                                             263-MSE                           297-MSE                                                352-MSE                                                407-MSE                                                       469-MSE  |      
                                                    48-MSE                                                                               134-MSE                                                                                                                                                                                                                                                                                                                                               476-MSE  
                                                        52-MSE                                                                            135-MSE                                                                                                                                                                                                                                                                                                                                                       


Chain D from PDB  Type:PROTEIN  Length:460
 aligned with Q87I71_VIBPA | Q87I71 from UniProtKB/TrEMBL  Length:483

    Alignment length:460
                                    32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302       312       322       332       342       352       362       372       382       392       402       412       422       432       442       452       462       472       482
         Q87I71_VIBPA    23 ETVVPSRVGDLKFESDFPTQETMKNMLNEMDFQRATQAYLWGIPASSIMEWLNVSRNDFKFEEGQMGFFNTLKQKQGIITANFTTPYVIGTWNLEKTGPLIINLPEAKMAGMMLDVHQRVLSDLSLLGPDKGKGGKYLIVPPGEKYKDLNPKGYYVIRPKTNVVYGGIRILEPDVDRVVKQVVPNITTQPYADGKLGRKIPVAQVPEIDWTHIPKDGLEYWKTIHQIIQENPVEERDRFVMAQLKFLGIEKGKPFNPTEEQKKILLEASKVGRAMAQSNDYTKRFTQPYWKGTNWKDAISVSLDQRSENYDELDERAAWFYEAITVSRGMKSTIPGFGQRYLVTYQDSDGNWLSGEHTYKLHVPANVPASNFWSTTVYDENNRLMIINDAGSPDISSRKNLKVNSDGSIDVYYGPKPVKGYENNWVQTNPGEGWFTYFRFYGPTEKMFDKSWTMGDIELV 482
               SCOP domains d3vb9d_ D: Hypothetical protein VPA0735                                                                                                                                                                                                                                                                                                                                                                                                                                      SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eee......eeee..eehhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh........eee.hhhhhh..........eeeeeeehhhhh.eeeee....eeeeee.....eeeeee.........eeeee...hhhhh.......eee.....eeeeeeee...hhhhhhhhhh...eeeeee..ee...ee.ee.............hhhhhhhhhhhhhh..hhhhhhhhhhhhhhh.........hhhhhhhhhhhhhhhhhhhhhhhhhh............ee..............hhhhhhhhhhhh....hhhhh......eeeeee.............eeeeee.....eeeeeeeeeee..............eee............eeeeee..........eee......eeeeeeeeeehhhhhh........eee Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3vb9 D  23 ETVVPSRVGDLKFESDFPTQETmKNmLNEmDFQRATQAYLWGIPASSImEWLNVSRNDFKFEEGQmGFFNTLKQKQGIITANFTTPYVIGTWNLEKTGPLIINLPEAKmAGmmLDVHQRVLSDLSLLGPDKGKGGKYLIVPPGEKYKDLNPKGYYVIRPKTNVVYGGIRILEPDVDRVVKQVVPNITTQPYADGKLGRKIPVAQVPEIDWTHIPKDGLEYWKTIHQIIQENPVEERDRFVmAQLKFLGIEKGKPFNPTEEQKKILLEASKVGRAmAQSNDYTKRFTQPYWKGTNWKDAISVSLDQRSENYDELDERAAWFYEAITVSRGmKSTIPGFGQRYLVTYQDSDGNWLSGEHTYKLHVPANVPASNFWSTTVYDENNRLmIINDAGSPDISSRKNLKVNSDGSIDVYYGPKPVKGYENNWVQTNPGEGWFTYFRFYGPTEKmFDKSWTmGDIELV 482
                                    32        42  |  |  52        62        72        82     |  92       102       112       122       132 ||    142       152       162       172       182       192       202       212       222       232       242       252       262|      272       282       292    |  302       312       322       332       342       352       362       372       382       392       402    |  412       422       432       442       452       462      |472   |   482
                                                 45-MSE  |                 71-MSE           88-MSE                                    131-MSE                                                                                                                             263-MSE                           297-MSE                                                352-MSE                                                407-MSE                                                       469-MSE  |      
                                                    48-MSE                                                                               134-MSE                                                                                                                                                                                                                                                                                                                                               476-MSE  
                                                        52-MSE                                                                            135-MSE
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (1, 4)

Asymmetric Unit
(-)
Class: Multi-domain proteins (alpha and beta) (2421)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 3VB9)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 3VB9)

(-) Gene Ontology  (0, 0)

Asymmetric Unit(hide GO term definitions)
    (no "Gene Ontology" information available for 3VB9)

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/TrEMBL
        Q87I71_VIBPA | Q87I71: 2p3y

(-) Related Entries Specified in the PDB File

2p3y RELATED ID: NESG-VPR109 RELATED DB: TARGETTRACK