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(-) Description

Title :  CRYSTAL STRUCTURE OF DE NOVO DESIGNED SERINE HYDROLASE OSH55, NORTHEAST STRUCTURAL GENOMICS CONSORTIUM TARGET OR130
 
Authors :  A. Kuzin, M. Su, J. Seetharaman, M. Maglaqui, R. Xiao, E. Kohan, S. Rajag J. K. Everett, R. Nair, T. B. Acton, B. Rost, D. Baker, G. T. Montelione, J. F. Hunt, Northeast Structural Genomics Consortium (Nesg)
Date :  14 Dec 11  (Deposition) - 04 Jan 12  (Release) - 14 May 14  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.60
Chains :  Asym./Biol. Unit :  A
Keywords :  Structural Genomics, Psi-Biology, Protein Structure Initiative, Northeast Structural Genomics Consortium, Nesg, De Novo Design, De Novo Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  S. Rajagopalan, C. Wang, K. Yu, A. P. Kuzin, F. Richter, S. Lew, A. E. Miklos, M. L. Matthews, J. Seetharaman, M. Su, J. F. Hunt, B. F. Cravatt, D. Baker
Design Of Activated Serine-Containing Catalytic Triads With Atomic-Level Accuracy.
Nat. Chem. Biol. V. 10 386 2014
PubMed-ID: 24705591  |  Reference-DOI: 10.1038/NCHEMBIO.1498

(-) Compounds

Molecule 1 - SERINE HYDROLASE OSH55
    Chains: A
    Engineered: YES
    Synthetic: YES

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit : A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (2, 3)

Asymmetric/Biological Unit (2, 3)
No.NameCountTypeFull Name
1CL1Ligand/IonCHLORIDE ION
2NA2Ligand/IonSODIUM ION

(-) Sites  (3, 3)

Asymmetric Unit (3, 3)
No.NameEvidenceResiduesDescription
1AC1SOFTWARESER A:85BINDING SITE FOR RESIDUE CL A 168
2AC2SOFTWAREALA A:31 , ALA A:115BINDING SITE FOR RESIDUE NA A 169
3AC3SOFTWAREGLY A:66 , LEU A:68 , VAL A:70 , GLU A:161BINDING SITE FOR RESIDUE NA A 170

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 3V45)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 3V45)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 3V45)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 3V45)

(-) Exons   (0, 0)

(no "Exon" information available for 3V45)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
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SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:166
                                                                                                                                                                                                      
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeee.hhhhh...eeeeeee.......hhhhhhhhhhhhhhhhhhhhhh......eeeee.......eeeeeeee.....hhhhhhhhhhhhhhhhhhh...eeeee.hhhhhh..hhhhhhhhhhhhhhhh....eeeeee.hhhhhhhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3v45 A   2 ARIREVQGDITEFQGDAIVNAANNYLKLGAGVAGAILRKGGPSIQEECDRIGKIRVGEAAVTGAGNLPVRYVIHAAVLGDEPASLETVRKATKSALEKAVELGLKTVAFTALGAWVGGLPAEAVLRVMLEEIKKAPDTLEVTGVHGTEKSAEAARRALLEHHHHHH 167
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161
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 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 3V45)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 3V45)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 3V45)

(-) Gene Ontology  (0, 0)

Asymmetric/Biological Unit(hide GO term definitions)
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  3v45
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

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(-) Related Entries Specified in the PDB File

2dx6 90% IDENTITY RELATED ID: OR130 RELATED DB: TARGETDB