3V3K - JenaLib

Asymmetric Unit

Reformat:	Number of residues per line = ('0' or empty: single-line sequence representation)
	Number of residues per labelling interval =
	UniProt sequence: complete aligned part

Show mapping:	SCOP domains	CATH domains	Pfam domains	Secondary structure (by author)
	SAPs(SNPs)	PROSITE motifs	Exons
	(details for a mapped element are shown in a popup box when the mouse pointer rests over it)

Chain A from PDB  Type:PROTEIN  Length:245
 aligned with CASP9_HUMAN | P55211 from UniProtKB/Swiss-Prot  Length:416

    Alignment length:276
                                   150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410      
         CASP9_HUMAN    141 ALESLRGNADLAYILSMEPCGHCLIINNVNFCRESGLRTRTGSNIDCEKLRRRFSSLHFMVEVKGDLTAKKMVLALLELAQQDHGALDCCVVVILSHGCQASHLQFPGAVYGTDGCPVSVEKIVNIFNGTSCPSLGGKPKLFFIQACGGEQKDHGFEVASTSPEDESPGSNPEPDATPFQEGLRTFDQLDAISSLPTPSDIFVSYSTFPGFVSWRDPKSGSWYVETLDDIFEQWAHSEDLQSLLLRVANAVSVKGIYKQMPGCFNFLRKKLFFKTS  416
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ....................eeeeeee..............hhhhhhhhhhhhhhhh.eeeeeee..hhhhhhhhhhhhhh........eeeeee..ee.........eee.....eeehhhhhhh.....hhhhh...eeeeee..........ee...-------------------------------.........eeeee........eee...eehhhhhhhhhhhhhh...hhhhhhhhhhhhhhh........eeee........... Sec.struct. author
                 SAPs(SNPs) --------------------------------H--R--------M------C----------------------------R--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (1) ------------------CASPASE_P20  PDB: A:162-289 UniProt: 159-291                                                                                         ---------------------------------------CASPASE_P10  PDB: A:318-381 UniProt: 331-395                     --------------------- PROSITE (1)
                PROSITE (2) -----------------------------------------------------------------------------------CASPASE_HIS    ---------------------------------------CASPASE_CYS ------------------------------------------------------------------------------------------------------------------------------- PROSITE (2)
           Transcript 1 (1) Exon 1.6   Exon 1.7b  PDB: A:152-209 (gaps) UniProt: 152-210          Exon 1.8  PDB: A:210-240 (gaps-------------------------------------------------Exon 1.10  PDB: A:288-336 (gaps) UniProt: 290-350            ------------------------------------Exon 1.12d UniProt: 387-416    Transcript 1 (1)
           Transcript 1 (2) ----------------------------------------------------------------------------------------------------Exon 1.9c  PDB: A:240A-288 (gaps) UniProt: 241-290-----------------------------------------------------------Exon 1.11  PDB: A:336-372            ------------------------------ Transcript 1 (2)
                3v3k A  141 ALESLRGNADLAYILSMEPCGHCLIINNVNFCRESGLRTRTGSNIDCEKLRRRFSSLHFMVEVKGDLTAKKMVLALLELARQDHGALDCCVVVILSHGCQASHLQFPGAVYGTDGCPVSVEKIVNIFNGTSCPSLGGKPKLFFIQACGGEQKDHGFEVAS-------------------------------ISSLPTPSDIFVSYSTFPGFVSWRDPKSGSWYVETLDDIFEQWAHSEDLQSLLLRVANAVSVKGIYKQMPGCFNFLRKKLFFKTS  403
                                   150      162A       172   ||| 179       189       199       209       219  ||   230       240|||||||243    || 258       268       278       288       298         -         -         - |     326       336       346       356       366       376       386   ||  397      
                                         156A| |          175A||                                            222|             240A||||||     248|                                         298                             318                                                                     390|           
                                           161 |           175B|                                             224              240B|||||      254                                                                                                                                                  392           
                                            162A            175C                                                               240C||||                                                                                                                                                                         
                                                                                                                                240D|||                                                                                                                                                                         
                                                                                                                                 240E||                                                                                                                                                                         
                                                                                                                                  240F|                                                                                                                                                                         
                                                                                                                                   240G

Chain B from PDB  Type:PROTEIN  Length:165
 aligned with NLEF_ECO57 | Q8XAL7 from UniProtKB/Swiss-Prot  Length:189

    Alignment length:165
                                    34        44        54        64        74        84        94       104       114       124       134       144       154       164       174       184     
          NLEF_ECO57     25 TPESVSELNHNHFLSPELQDKLDVMVSIYSCARNNNELEEIFQELSAFVSGLMDKRNSVFEVRNENTDEVVGALRAGMTIEDRDSYIRDLFFLHSLKVKIEESRQGKEDSKCKVYNLLCPHHSSELYGDLRAMKCLVEGCSDDFNPFDIIRVPDLTYNKGSLQCG  189
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ........hhhhh.hhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhheeee.......eeee....hhhhhhhhhhhhhhhhhhhhhhhhhh.......hhhhhhh.....hhhhhhhhhhhhhhh........................ee. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                3v3k B   25 TPESVSELNHNHFLSPELQDKLDVMVSIYSCARNNNELEEIFQELSAFVSGLMDKRNSVFEVRNENTDEVVGALRAGMTIEDRDSYIRDLFFLHSLKVKIEESRQGKEDSKCKVYNLLCPHHSSELYGDLRAMKCLVEGCSDDFNPFDIIRVPDLTYNKGSLQCG  189
                                    34        44        54        64        74        84        94       104       114       124       134       144       154       164       174       184

Chain C from PDB  Type:PROTEIN  Length:237
 aligned with CASP9_HUMAN | P55211 from UniProtKB/Swiss-Prot  Length:416

    Alignment length:269
                                   157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347       357       367       377       387       397       407         
         CASP9_HUMAN    148 NADLAYILSMEPCGHCLIINNVNFCRESGLRTRTGSNIDCEKLRRRFSSLHFMVEVKGDLTAKKMVLALLELAQQDHGALDCCVVVILSHGCQASHLQFPGAVYGTDGCPVSVEKIVNIFNGTSCPSLGGKPKLFFIQACGGEQKDHGFEVASTSPEDESPGSNPEPDATPFQEGLRTFDQLDAISSLPTPSDIFVSYSTFPGFVSWRDPKSGSWYVETLDDIFEQWAHSEDLQSLLLRVANAVSVKGIYKQMPGCFNFLRKKLFFKTS  416
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .............eeeeeee..............hhhhhhhhhhhhhhhh.eeeeeee..hhhhhhhhhhhhhhh......eeeeeee..ee.........eee.....eeehhhhhhh.....hhhhh...eeeeee...............--------------------------------.ee.....eeeee........eee...eehhhhhhhhhhhhhh...hhhhhhhhhhhhhhh........eeeee.......... Sec.struct. author
                 SAPs(SNPs) -------------------------H--R--------M------C----------------------------R--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (1) -----------CASPASE_P20  PDB: C:162-289 UniProt: 159-291                                                                                         ---------------------------------------CASPASE_P10  PDB: C:319-381 UniProt: 331-395                     --------------------- PROSITE (1)
                PROSITE (2) ----------------------------------------------------------------------------CASPASE_HIS    ---------------------------------------CASPASE_CYS ------------------------------------------------------------------------------------------------------------------------------- PROSITE (2)
           Transcript 1 (1) 1.6 Exon 1.7b  PDB: C:152-209 (gaps) UniProt: 152-210          Exon 1.8  PDB: C:210-240 (gaps-------------------------------------------------Exon 1.10  PDB: C:288-336 (gaps) UniProt: 290-350            ------------------------------------Exon 1.12d UniProt: 387-416    Transcript 1 (1)
           Transcript 1 (2) ---------------------------------------------------------------------------------------------Exon 1.9c  PDB: C:240A-288 (gaps) UniProt: 241-290-----------------------------------------------------------Exon 1.11  PDB: C:336-372            ------------------------------ Transcript 1 (2)
                3v3k C  148 NADLAYILSMEPCGHCLIINNVNFCRESGLRTRTGSNIDCEKLRRRFSSLHFMVEVKGDLTAKKMVLALLELARQDHGALDCCVVVILSHGCQASHLQFPGAVYGTDGCPVSVEKIVNIFNGTSCPSLGGKPKLFFIQACGGEQKDHGFEVAS--------------------------------SSLPTPSDIFVSYSTFPGFVSWRDPKSGSWYVETLDDIFEQWAHSEDLQSLLLRVANAVSVKGIYKQMPGCFNFLRKKLFFKTS  403
                                  156A| |    169      |176       186       196       206       216     ||227       237   |||240G       255       265       275       285       295  |      -         -         -     | 323       333       343       353       363       373       383      |394         
                                  156A| |          175A||                                            222|             240A||||||     248|                                         298                              319                                                                    390|           
                                    161 |           175B|                                             224              240B|||||      254                                                                                                                                                  392           
                                     162A            175C                                                               240C||||                                                                                                                                                                         
                                                                                                                         240D|||                                                                                                                                                                         
                                                                                                                          240E||                                                                                                                                                                         
                                                                                                                           240F|                                                                                                                                                                         
                                                                                                                            240G

Chain D from PDB  Type:PROTEIN  Length:164
 aligned with NLEF_ECO57 | Q8XAL7 from UniProtKB/Swiss-Prot  Length:189

    Alignment length:164
                                    35        45        55        65        75        85        95       105       115       125       135       145       155       165       175       185    
          NLEF_ECO57     26 PESVSELNHNHFLSPELQDKLDVMVSIYSCARNNNELEEIFQELSAFVSGLMDKRNSVFEVRNENTDEVVGALRAGMTIEDRDSYIRDLFFLHSLKVKIEESRQGKEDSKCKVYNLLCPHHSSELYGDLRAMKCLVEGCSDDFNPFDIIRVPDLTYNKGSLQCG  189
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .......hhhhh.hhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhheeee.......eeee....hhhhhhhhhhhhhhhhhhhhhhhhhh.......hhhhhhh.....hhhhhhhhhhhhhhhh.......................ee. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                3v3k D   26 PESVSELNHNHFLSPELQDKLDVMVSIYSCARNNNELEEIFQELSAFVSGLMDKRNSVFEVRNENTDEVVGALRAGMTIEDRDSYIRDLFFLHSLKVKIEESRQGKEDSKCKVYNLLCPHHSSELYGDLRAMKCLVEGCSDDFNPFDIIRVPDLTYNKGSLQCG  189
                                    35        45        55        65        75        85        95       105       115       125       135       145       155       165       175       185

Chain E from PDB  Type:PROTEIN  Length:243
 aligned with CASP9_HUMAN | P55211 from UniProtKB/Swiss-Prot  Length:416

    Alignment length:274
                                   152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302       312       322       332       342       352       362       372       382       392       402       412    
         CASP9_HUMAN    143 ESLRGNADLAYILSMEPCGHCLIINNVNFCRESGLRTRTGSNIDCEKLRRRFSSLHFMVEVKGDLTAKKMVLALLELAQQDHGALDCCVVVILSHGCQASHLQFPGAVYGTDGCPVSVEKIVNIFNGTSCPSLGGKPKLFFIQACGGEQKDHGFEVASTSPEDESPGSNPEPDATPFQEGLRTFDQLDAISSLPTPSDIFVSYSTFPGFVSWRDPKSGSWYVETLDDIFEQWAHSEDLQSLLLRVANAVSVKGIYKQMPGCFNFLRKKLFFKTS  416
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..................eeeeeee..............hhhhhhhhhhhhhhhh.eeeeeee..hhhhhhhhhhhhhh........eeeeee.............eee.....eeehhhhhh......hhhhh...eeeeee..........ee...-------------------------------..ee.....eeeee........eee...eehhhhhhhhhhhhhh...hhhhhhhhhhhhhhh........eeeee.......... Sec.struct. author
                 SAPs(SNPs) ------------------------------H--R--------M------C----------------------------R--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (1) ----------------CASPASE_P20  PDB: E:162-289 UniProt: 159-291                                                                                         ---------------------------------------CASPASE_P10  PDB: E:318-381 UniProt: 331-395                     --------------------- PROSITE (1)
                PROSITE (2) ---------------------------------------------------------------------------------CASPASE_HIS    ---------------------------------------CASPASE_CYS ------------------------------------------------------------------------------------------------------------------------------- PROSITE (2)
           Transcript 1 (1) Exon 1.6 Exon 1.7b  PDB: E:152-209 (gaps) UniProt: 152-210          Exon 1.8  PDB: E:210-240 (gaps-------------------------------------------------Exon 1.10  PDB: E:288-336 (gaps) UniProt: 290-350            ------------------------------------Exon 1.12d UniProt: 387-416    Transcript 1 (1)
           Transcript 1 (2) --------------------------------------------------------------------------------------------------Exon 1.9c  PDB: E:240A-288 (gaps) UniProt: 241-290-----------------------------------------------------------Exon 1.11  PDB: E:336-372            ------------------------------ Transcript 1 (2)
                3v3k E  143 ESLRGNADLAYILSMEPCGHCLIINNVNFCRESGLRTRTGSNIDCEKLRRRFSSLHFMVEVKGDLTAKKMVLALLELARQDHGALDCCVVVILSHGCQASHLQFPGAVYGTDGCPVSVEKIVNIFNGTSCPSLGGKPKLFFIQACGGEQKDHGFEVAS-------------------------------ISSLPTPSDIFVSYSTFPGFVSWRDPKSGSWYVETLDDIFEQWAHSEDLQSLLLRVANAVSVKGIYKQMPGCFNFLRKKLFFKTS  403
                                   152    || 164       174 |||   181       191       201       211       221||     232      240B|||||  245  ||   260       270       280       290       | -         -         -       318       328       338       348       358       368       378       388 ||    399    
                                       156A| |          175A||                                            222|             240A||||||     248|                                         298                             318                                                                     390|           
                                         161 |           175B|                                             224              240B|||||      254                                                                                                                                                  392           
                                          162A            175C                                                               240C||||                                                                                                                                                                         
                                                                                                                              240D|||                                                                                                                                                                         
                                                                                                                               240E||                                                                                                                                                                         
                                                                                                                                240F|                                                                                                                                                                         
                                                                                                                                 240G

Chain F from PDB  Type:PROTEIN  Length:165
 aligned with NLEF_ECO57 | Q8XAL7 from UniProtKB/Swiss-Prot  Length:189

    Alignment length:165
                                    34        44        54        64        74        84        94       104       114       124       134       144       154       164       174       184     
          NLEF_ECO57     25 TPESVSELNHNHFLSPELQDKLDVMVSIYSCARNNNELEEIFQELSAFVSGLMDKRNSVFEVRNENTDEVVGALRAGMTIEDRDSYIRDLFFLHSLKVKIEESRQGKEDSKCKVYNLLCPHHSSELYGDLRAMKCLVEGCSDDFNPFDIIRVPDLTYNKGSLQCG  189
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ........hhhhh.hhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhheeee.......eeee....hhhhhhhhhhhhhhhhhhhhhhhhhh.......hhhhhhh.....hhhhhhhhhhhhhhh........................ee. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                3v3k F   25 TPESVSELNHNHFLSPELQDKLDVMVSIYSCARNNNELEEIFQELSAFVSGLMDKRNSVFEVRNENTDEVVGALRAGMTIEDRDSYIRDLFFLHSLKVKIEESRQGKEDSKCKVYNLLCPHHSSELYGDLRAMKCLVEGCSDDFNPFDIIRVPDLTYNKGSLQCG  189
                                    34        44        54        64        74        84        94       104       114       124       134       144       154       164       174       184

Chain G from PDB  Type:PROTEIN  Length:235
 aligned with CASP9_HUMAN | P55211 from UniProtKB/Swiss-Prot  Length:416

    Alignment length:269
                                   157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347       357       367       377       387       397       407         
         CASP9_HUMAN    148 NADLAYILSMEPCGHCLIINNVNFCRESGLRTRTGSNIDCEKLRRRFSSLHFMVEVKGDLTAKKMVLALLELAQQDHGALDCCVVVILSHGCQASHLQFPGAVYGTDGCPVSVEKIVNIFNGTSCPSLGGKPKLFFIQACGGEQKDHGFEVASTSPEDESPGSNPEPDATPFQEGLRTFDQLDAISSLPTPSDIFVSYSTFPGFVSWRDPKSGSWYVETLDDIFEQWAHSEDLQSLLLRVANAVSVKGIYKQMPGCFNFLRKKLFFKTS  416
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .............eeeeeee..............hhhhhhhhhhhhhhhh.eeeeeee..hhhhhhhhhhhhhhh.......eeeeee..ee.........eee.....eeehhhhhhhh....hhhhh...eeeeee..........ee.----------------------------------.ee.....eeeee........eee...eehhhhhhhhhhhhhh...hhhhhhhhhhhhhhh........eeeee.......... Sec.struct. author
                 SAPs(SNPs) -------------------------H--R--------M------C----------------------------R--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (1) -----------CASPASE_P20  PDB: G:162-289 UniProt: 159-291                                                                                         ---------------------------------------CASPASE_P10  PDB: G:319-381 UniProt: 331-395                     --------------------- PROSITE (1)
                PROSITE (2) ----------------------------------------------------------------------------CASPASE_HIS    ---------------------------------------CASPASE_CYS ------------------------------------------------------------------------------------------------------------------------------- PROSITE (2)
           Transcript 1 (1) 1.6 Exon 1.7b  PDB: G:152-209 (gaps) UniProt: 152-210          Exon 1.8  PDB: G:210-240 (gaps-------------------------------------------------Exon 1.10  PDB: G:288-336 (gaps) UniProt: 290-350            ------------------------------------Exon 1.12d UniProt: 387-416    Transcript 1 (1)
           Transcript 1 (2) ---------------------------------------------------------------------------------------------Exon 1.9c  PDB: G:240A-288 (gaps) UniProt: 241-290-----------------------------------------------------------Exon 1.11  PDB: G:336-372            ------------------------------ Transcript 1 (2)
                3v3k G  148 NADLAYILSMEPCGHCLIINNVNFCRESGLRTRTGSNIDCEKLRRRFSSLHFMVEVKGDLTAKKMVLALLELARQDHGALDCCVVVILSHGCQASHLQFPGAVYGTDGCPVSVEKIVNIFNGTSCPSLGGKPKLFFIQACGGEQKDHGFEV----------------------------------SSLPTPSDIFVSYSTFPGFVSWRDPKSGSWYVETLDDIFEQWAHSEDLQSLLLRVANAVSVKGIYKQMPGCFNFLRKKLFFKTS  403
                                  156A| |    169      |176       186       196       206       216     ||227       237   |||240G       255       265       275       285       295|        -         -         -     | 323       333       343       353       363       373       383      |394         
                                  156A| |          175A||                                            222|             240A||||||     248|                                       296                                319                                                                    390|           
                                    161 |           175B|                                             224              240B|||||      254                                                                                                                                                  392           
                                     162A            175C                                                               240C||||                                                                                                                                                                         
                                                                                                                         240D|||                                                                                                                                                                         
                                                                                                                          240E||                                                                                                                                                                         
                                                                                                                           240F|                                                                                                                                                                         
                                                                                                                            240G

Chain H from PDB  Type:PROTEIN  Length:165
 aligned with NLEF_ECO57 | Q8XAL7 from UniProtKB/Swiss-Prot  Length:189

    Alignment length:165
                                    34        44        54        64        74        84        94       104       114       124       134       144       154       164       174       184     
          NLEF_ECO57     25 TPESVSELNHNHFLSPELQDKLDVMVSIYSCARNNNELEEIFQELSAFVSGLMDKRNSVFEVRNENTDEVVGALRAGMTIEDRDSYIRDLFFLHSLKVKIEESRQGKEDSKCKVYNLLCPHHSSELYGDLRAMKCLVEGCSDDFNPFDIIRVPDLTYNKGSLQCG  189
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ........hhhhh.hhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhheeee.......eeee....hhhhhhhhhhhhhhhhhhhhhhhhhh.........hhhhhh....hhhhhhhhhhhhhhh........................ee. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                3v3k H   25 TPESVSELNHNHFLSPELQDKLDVMVSIYSCARNNNELEEIFQELSAFVSGLMDKRNSVFEVRNENTDEVVGALRAGMTIEDRDSYIRDLFFLHSLKVKIEESRQGKEDSKCKVYNLLCPHHSSELYGDLRAMKCLVEGCSDDFNPFDIIRVPDLTYNKGSLQCG  189
                                    34        44        54        64        74        84        94       104       114       124       134       144       154       164       174       184

Chain I from PDB  Type:PROTEIN  Length:244
 aligned with CASP9_HUMAN | P55211 from UniProtKB/Swiss-Prot  Length:416

    Alignment length:276
                                   150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410      
         CASP9_HUMAN    141 ALESLRGNADLAYILSMEPCGHCLIINNVNFCRESGLRTRTGSNIDCEKLRRRFSSLHFMVEVKGDLTAKKMVLALLELAQQDHGALDCCVVVILSHGCQASHLQFPGAVYGTDGCPVSVEKIVNIFNGTSCPSLGGKPKLFFIQACGGEQKDHGFEVASTSPEDESPGSNPEPDATPFQEGLRTFDQLDAISSLPTPSDIFVSYSTFPGFVSWRDPKSGSWYVETLDDIFEQWAHSEDLQSLLLRVANAVSVKGIYKQMPGCFNFLRKKLFFKTS  416
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .hhhhhh.............eeeeeee..............hhhhhhhhhhhhhhhh.eeeeeee..hhhhhhhhhhhhhhh.......eeeeee..ee.........eee.....eeehhhhhhh.....hhhhh...eeeeee..........ee...--------------------------------........eeeee........eee...eehhhhhhhhhhhhhh...hhhhhhhhhhhhhhh........eeeee.......... Sec.struct. author
                 SAPs(SNPs) --------------------------------H--R--------M------C----------------------------R--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (1) ------------------CASPASE_P20  PDB: I:162-289 UniProt: 159-291                                                                                         ---------------------------------------CASPASE_P10  PDB: I:319-381 UniProt: 331-395                     --------------------- PROSITE (1)
                PROSITE (2) -----------------------------------------------------------------------------------CASPASE_HIS    ---------------------------------------CASPASE_CYS ------------------------------------------------------------------------------------------------------------------------------- PROSITE (2)
           Transcript 1 (1) Exon 1.6   Exon 1.7b  PDB: I:152-209 (gaps) UniProt: 152-210          Exon 1.8  PDB: I:210-240 (gaps-------------------------------------------------Exon 1.10  PDB: I:288-336 (gaps) UniProt: 290-350            ------------------------------------Exon 1.12d UniProt: 387-416    Transcript 1 (1)
           Transcript 1 (2) ----------------------------------------------------------------------------------------------------Exon 1.9c  PDB: I:240A-288 (gaps) UniProt: 241-290-----------------------------------------------------------Exon 1.11  PDB: I:336-372            ------------------------------ Transcript 1 (2)
                3v3k I  141 ALESLRGNADLAYILSMEPCGHCLIINNVNFCRESGLRTRTGSNIDCEKLRRRFSSLHFMVEVKGDLTAKKMVLALLELARQDHGALDCCVVVILSHGCQASHLQFPGAVYGTDGCPVSVEKIVNIFNGTSCPSLGGKPKLFFIQACGGEQKDHGFEVAS--------------------------------SSLPTPSDIFVSYSTFPGFVSWRDPKSGSWYVETLDDIFEQWAHSEDLQSLLLRVANAVSVKGIYKQMPGCFNFLRKKLFFKTS  403
                                   150      162A       172   ||| 179       189       199       209       219  ||   230       240|||||||243    || 258       268       278       288       298         -         -         -  |    326       336       346       356       366       376       386   ||  397      
                                         156A| |          175A||                                            222|             240A||||||     248|                                         298                              319                                                                    390|           
                                           161 |           175B|                                             224              240B|||||      254                                                                                                                                                  392           
                                            162A            175C                                                               240C||||                                                                                                                                                                         
                                                                                                                                240D|||                                                                                                                                                                         
                                                                                                                                 240E||                                                                                                                                                                         
                                                                                                                                  240F|                                                                                                                                                                         
                                                                                                                                   240G

Chain J from PDB  Type:PROTEIN  Length:165
 aligned with NLEF_ECO57 | Q8XAL7 from UniProtKB/Swiss-Prot  Length:189

    Alignment length:165
                                    34        44        54        64        74        84        94       104       114       124       134       144       154       164       174       184     
          NLEF_ECO57     25 TPESVSELNHNHFLSPELQDKLDVMVSIYSCARNNNELEEIFQELSAFVSGLMDKRNSVFEVRNENTDEVVGALRAGMTIEDRDSYIRDLFFLHSLKVKIEESRQGKEDSKCKVYNLLCPHHSSELYGDLRAMKCLVEGCSDDFNPFDIIRVPDLTYNKGSLQCG  189
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ........hhhhh.hhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhheeee.......eeee....hhhhhhhhhhhhhhhhhhhhhhhhhh.......hhhhhhh.....hhhhhhhhhhhhhhh........................ee. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                3v3k J   25 TPESVSELNHNHFLSPELQDKLDVMVSIYSCARNNNELEEIFQELSAFVSGLMDKRNSVFEVRNENTDEVVGALRAGMTIEDRDSYIRDLFFLHSLKVKIEESRQGKEDSKCKVYNLLCPHHSSELYGDLRAMKCLVEGCSDDFNPFDIIRVPDLTYNKGSLQCG  189
                                    34        44        54        64        74        84        94       104       114       124       134       144       154       164       174       184

Chain K from PDB  Type:PROTEIN  Length:237
 aligned with CASP9_HUMAN | P55211 from UniProtKB/Swiss-Prot  Length:416

    Alignment length:269
                                   157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347       357       367       377       387       397       407         
         CASP9_HUMAN    148 NADLAYILSMEPCGHCLIINNVNFCRESGLRTRTGSNIDCEKLRRRFSSLHFMVEVKGDLTAKKMVLALLELAQQDHGALDCCVVVILSHGCQASHLQFPGAVYGTDGCPVSVEKIVNIFNGTSCPSLGGKPKLFFIQACGGEQKDHGFEVASTSPEDESPGSNPEPDATPFQEGLRTFDQLDAISSLPTPSDIFVSYSTFPGFVSWRDPKSGSWYVETLDDIFEQWAHSEDLQSLLLRVANAVSVKGIYKQMPGCFNFLRKKLFFKTS  416
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .............eeeeeee..............hhhhhhhhhhhhhhhh.eeeeeee..hhhhhhhhhhhhhhh......eeeeeee..ee.........eee.....eeehhhhhhh.....hhhhh...eeeeee...............--------------------------------.ee.....eeeee........eee...eehhhhhhhhhhhhhh...hhhhhhhhhhhhhhh........eeeee.......... Sec.struct. author
                 SAPs(SNPs) -------------------------H--R--------M------C----------------------------R--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (1) -----------CASPASE_P20  PDB: K:162-289 UniProt: 159-291                                                                                         ---------------------------------------CASPASE_P10  PDB: K:319-381 UniProt: 331-395                     --------------------- PROSITE (1)
                PROSITE (2) ----------------------------------------------------------------------------CASPASE_HIS    ---------------------------------------CASPASE_CYS ------------------------------------------------------------------------------------------------------------------------------- PROSITE (2)
           Transcript 1 (1) 1.6 Exon 1.7b  PDB: K:152-209 (gaps) UniProt: 152-210          Exon 1.8  PDB: K:210-240 (gaps-------------------------------------------------Exon 1.10  PDB: K:288-336 (gaps) UniProt: 290-350            ------------------------------------Exon 1.12d UniProt: 387-416    Transcript 1 (1)
           Transcript 1 (2) ---------------------------------------------------------------------------------------------Exon 1.9c  PDB: K:240A-288 (gaps) UniProt: 241-290-----------------------------------------------------------Exon 1.11  PDB: K:336-372            ------------------------------ Transcript 1 (2)
                3v3k K  148 NADLAYILSMEPCGHCLIINNVNFCRESGLRTRTGSNIDCEKLRRRFSSLHFMVEVKGDLTAKKMVLALLELARQDHGALDCCVVVILSHGCQASHLQFPGAVYGTDGCPVSVEKIVNIFNGTSCPSLGGKPKLFFIQACGGEQKDHGFEVAS--------------------------------SSLPTPSDIFVSYSTFPGFVSWRDPKSGSWYVETLDDIFEQWAHSEDLQSLLLRVANAVSVKGIYKQMPGCFNFLRKKLFFKTS  403
                                  156A| |    169      |176       186       196       206       216     ||227       237   |||240G       255       265       275       285       295  |      -         -         -     | 323       333       343       353       363       373       383      |394         
                                  156A| |          175A||                                            222|             240A||||||     248|                                         298                              319                                                                    390|           
                                    161 |           175B|                                             224              240B|||||      254                                                                                                                                                  392           
                                     162A            175C                                                               240C||||                                                                                                                                                                         
                                                                                                                         240D|||                                                                                                                                                                         
                                                                                                                          240E||                                                                                                                                                                         
                                                                                                                           240F|                                                                                                                                                                         
                                                                                                                            240G

Chain L from PDB  Type:PROTEIN  Length:161
 aligned with NLEF_ECO57 | Q8XAL7 from UniProtKB/Swiss-Prot  Length:189

    Alignment length:165
                                    34        44        54        64        74        84        94       104       114       124       134       144       154       164       174       184     
          NLEF_ECO57     25 TPESVSELNHNHFLSPELQDKLDVMVSIYSCARNNNELEEIFQELSAFVSGLMDKRNSVFEVRNENTDEVVGALRAGMTIEDRDSYIRDLFFLHSLKVKIEESRQGKEDSKCKVYNLLCPHHSSELYGDLRAMKCLVEGCSDDFNPFDIIRVPDLTYNKGSLQCG  189
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ........hhhhh.hhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhheeee.......eeee....hhhhhhhhhhhhhhhhhhhhhhhhhh.......hhhhhhhh....hhhhhhhhhhhhhhhh.----..................ee. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                3v3k L   25 TPESVSELNHNHFLSPELQDKLDVMVSIYSCARNNNELEEIFQELSAFVSGLMDKRNSVFEVRNENTDEVVGALRAGMTIEDRDSYIRDLFFLHSLKVKIEESRQGKEDSKCKVYNLLCPHHSSELYGDLRAMKCLVEGC----NPFDIIRVPDLTYNKGSLQCG  189
                                    34        44        54        64        74        84        94       104       114       124       134       144       154       164    |  174       184     
                                                                                                                                                                     164  169

Chain M from PDB  Type:PROTEIN  Length:245
 aligned with CASP9_HUMAN | P55211 from UniProtKB/Swiss-Prot  Length:416

    Alignment length:276
                                   150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410      
         CASP9_HUMAN    141 ALESLRGNADLAYILSMEPCGHCLIINNVNFCRESGLRTRTGSNIDCEKLRRRFSSLHFMVEVKGDLTAKKMVLALLELAQQDHGALDCCVVVILSHGCQASHLQFPGAVYGTDGCPVSVEKIVNIFNGTSCPSLGGKPKLFFIQACGGEQKDHGFEVASTSPEDESPGSNPEPDATPFQEGLRTFDQLDAISSLPTPSDIFVSYSTFPGFVSWRDPKSGSWYVETLDDIFEQWAHSEDLQSLLLRVANAVSVKGIYKQMPGCFNFLRKKLFFKTS  416
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .hhhhhh.............eeeeeee..............hhhhhhhhhhhhhhhh.eeeeeee..hhhhhhhhhhhhhhh.......eeeeee..ee.........eee.....eeehhhhhhh.....hhhhh...eeeeee..........ee...-------------------------------.........eeeee........eee...eehhhhhhhhhhhhhh...hhhhhhhhhhhhhhh.........eeee.......... Sec.struct. author
                 SAPs(SNPs) --------------------------------H--R--------M------C----------------------------R--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (1) ------------------CASPASE_P20  PDB: M:162-289 UniProt: 159-291                                                                                         ---------------------------------------CASPASE_P10  PDB: M:318-381 UniProt: 331-395                     --------------------- PROSITE (1)
                PROSITE (2) -----------------------------------------------------------------------------------CASPASE_HIS    ---------------------------------------CASPASE_CYS ------------------------------------------------------------------------------------------------------------------------------- PROSITE (2)
           Transcript 1 (1) Exon 1.6   Exon 1.7b  PDB: M:152-209 (gaps) UniProt: 152-210          Exon 1.8  PDB: M:210-240 (gaps-------------------------------------------------Exon 1.10  PDB: M:288-336 (gaps) UniProt: 290-350            ------------------------------------Exon 1.12d UniProt: 387-416    Transcript 1 (1)
           Transcript 1 (2) ----------------------------------------------------------------------------------------------------Exon 1.9c  PDB: M:240A-288 (gaps) UniProt: 241-290-----------------------------------------------------------Exon 1.11  PDB: M:336-372            ------------------------------ Transcript 1 (2)
                3v3k M  141 ALESLRGNADLAYILSMEPCGHCLIINNVNFCRESGLRTRTGSNIDCEKLRRRFSSLHFMVEVKGDLTAKKMVLALLELARQDHGALDCCVVVILSHGCQASHLQFPGAVYGTDGCPVSVEKIVNIFNGTSCPSLGGKPKLFFIQACGGEQKDHGFEVAS-------------------------------ISSLPTPSDIFVSYSTFPGFVSWRDPKSGSWYVETLDDIFEQWAHSEDLQSLLLRVANAVSVKGIYKQMPGCFNFLRKKLFFKTS  403
                                   150      162A       172   ||| 179       189       199       209       219  ||   230       240|||||||243    || 258       268       278       288       298         -         -         - |     326       336       346       356       366       376       386   ||  397      
                                         156A| |          175A||                                            222|             240A||||||     248|                                         298                             318                                                                     390|           
                                           161 |           175B|                                             224              240B|||||      254                                                                                                                                                  392           
                                            162A            175C                                                               240C||||                                                                                                                                                                         
                                                                                                                                240D|||                                                                                                                                                                         
                                                                                                                                 240E||                                                                                                                                                                         
                                                                                                                                  240F|                                                                                                                                                                         
                                                                                                                                   240G

Chain N from PDB  Type:PROTEIN  Length:165
 aligned with NLEF_ECO57 | Q8XAL7 from UniProtKB/Swiss-Prot  Length:189

    Alignment length:165
                                    34        44        54        64        74        84        94       104       114       124       134       144       154       164       174       184     
          NLEF_ECO57     25 TPESVSELNHNHFLSPELQDKLDVMVSIYSCARNNNELEEIFQELSAFVSGLMDKRNSVFEVRNENTDEVVGALRAGMTIEDRDSYIRDLFFLHSLKVKIEESRQGKEDSKCKVYNLLCPHHSSELYGDLRAMKCLVEGCSDDFNPFDIIRVPDLTYNKGSLQCG  189
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ........hhhhh.hhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhheeee.......eeee....hhhhhhhhhhhhhhhhhhhhhhhhhh...................hhhhhhhhhhhhhhh........................ee. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                3v3k N   25 TPESVSELNHNHFLSPELQDKLDVMVSIYSCARNNNELEEIFQELSAFVSGLMDKRNSVFEVRNENTDEVVGALRAGMTIEDRDSYIRDLFFLHSLKVKIEESRQGKEDSKCKVYNLLCPHHSSELYGDLRAMKCLVEGCSDDFNPFDIIRVPDLTYNKGSLQCG  189
                                    34        44        54        64        74        84        94       104       114       124       134       144       154       164       174       184

Chain O from PDB  Type:PROTEIN  Length:237
 aligned with CASP9_HUMAN | P55211 from UniProtKB/Swiss-Prot  Length:416

    Alignment length:269
                                   157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347       357       367       377       387       397       407         
         CASP9_HUMAN    148 NADLAYILSMEPCGHCLIINNVNFCRESGLRTRTGSNIDCEKLRRRFSSLHFMVEVKGDLTAKKMVLALLELAQQDHGALDCCVVVILSHGCQASHLQFPGAVYGTDGCPVSVEKIVNIFNGTSCPSLGGKPKLFFIQACGGEQKDHGFEVASTSPEDESPGSNPEPDATPFQEGLRTFDQLDAISSLPTPSDIFVSYSTFPGFVSWRDPKSGSWYVETLDDIFEQWAHSEDLQSLLLRVANAVSVKGIYKQMPGCFNFLRKKLFFKTS  416
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .............eeeeeee..............hhhhhhhhhhhhhhhh.eeeeeee..hhhhhhhhhhhhhhh......eeeeeee..ee.........eee.....eeehhhhhhh.....hhhhh...eeeeee...............--------------------------------.ee.....eeeee........eee...eehhhhhhhhhhhhhh...hhhhhhhhhhhhhhh........eeeee.......... Sec.struct. author
                 SAPs(SNPs) -------------------------H--R--------M------C----------------------------R--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (1) -----------CASPASE_P20  PDB: O:162-289 UniProt: 159-291                                                                                         ---------------------------------------CASPASE_P10  PDB: O:319-381 UniProt: 331-395                     --------------------- PROSITE (1)
                PROSITE (2) ----------------------------------------------------------------------------CASPASE_HIS    ---------------------------------------CASPASE_CYS ------------------------------------------------------------------------------------------------------------------------------- PROSITE (2)
           Transcript 1 (1) 1.6 Exon 1.7b  PDB: O:152-209 (gaps) UniProt: 152-210          Exon 1.8  PDB: O:210-240 (gaps-------------------------------------------------Exon 1.10  PDB: O:288-336 (gaps) UniProt: 290-350            ------------------------------------Exon 1.12d UniProt: 387-416    Transcript 1 (1)
           Transcript 1 (2) ---------------------------------------------------------------------------------------------Exon 1.9c  PDB: O:240A-288 (gaps) UniProt: 241-290-----------------------------------------------------------Exon 1.11  PDB: O:336-372            ------------------------------ Transcript 1 (2)
                3v3k O  148 NADLAYILSMEPCGHCLIINNVNFCRESGLRTRTGSNIDCEKLRRRFSSLHFMVEVKGDLTAKKMVLALLELARQDHGALDCCVVVILSHGCQASHLQFPGAVYGTDGCPVSVEKIVNIFNGTSCPSLGGKPKLFFIQACGGEQKDHGFEVAS--------------------------------SSLPTPSDIFVSYSTFPGFVSWRDPKSGSWYVETLDDIFEQWAHSEDLQSLLLRVANAVSVKGIYKQMPGCFNFLRKKLFFKTS  403
                                  156A| |    169      |176       186       196       206       216     ||227       237   |||240G       255       265       275       285       295  |      -         -         -     | 323       333       343       353       363       373       383      |394         
                                  156A| |          175A||                                            222|             240A||||||     248|                                         298                              319                                                                    390|           
                                    161 |           175B|                                             224              240B|||||      254                                                                                                                                                  392           
                                     162A            175C                                                               240C||||                                                                                                                                                                         
                                                                                                                         240D|||                                                                                                                                                                         
                                                                                                                          240E||                                                                                                                                                                         
                                                                                                                           240F|                                                                                                                                                                         
                                                                                                                            240G

Chain P from PDB  Type:PROTEIN  Length:165
 aligned with NLEF_ECO57 | Q8XAL7 from UniProtKB/Swiss-Prot  Length:189

    Alignment length:165
                                    34        44        54        64        74        84        94       104       114       124       134       144       154       164       174       184     
          NLEF_ECO57     25 TPESVSELNHNHFLSPELQDKLDVMVSIYSCARNNNELEEIFQELSAFVSGLMDKRNSVFEVRNENTDEVVGALRAGMTIEDRDSYIRDLFFLHSLKVKIEESRQGKEDSKCKVYNLLCPHHSSELYGDLRAMKCLVEGCSDDFNPFDIIRVPDLTYNKGSLQCG  189
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ........hhhhh.hhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhheeee.......eeee....hhhhhhhhhhhhhhhhhhhhhhhhhh.......hhhhhhhh....hhhhhhhhhhhhhhh........................ee. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                3v3k P   25 TPESVSELNHNHFLSPELQDKLDVMVSIYSCARNNNELEEIFQELSAFVSGLMDKRNSVFEVRNENTDEVVGALRAGMTIEDRDSYIRDLFFLHSLKVKIEESRQGKEDSKCKVYNLLCPHHSSELYGDLRAMKCLVEGCSDDFNPFDIIRVPDLTYNKGSLQCG  189
                                    34        44        54        64        74        84        94       104       114       124       134       144       154       164       174       184

Legend:		→ Mismatch	(orange background)
	-	→ Gap	(green background, '-', border residues have a numbering label)
		→ Modified Residue	(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
	x	→ Chemical Group	(purple background, 'x', labelled with number + name, e.g. ACE or NH2)
	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '\|'

Asymmetric Unit(hide GO term definitions)

Chain A,C,E,G,I,K,M,O (CASP9_HUMAN | P55211)

molecular function
	GO:0017124	SH3 domain binding	Interacting selectively and non-covalently with a SH3 domain (Src homology 3) of a protein, small protein modules containing approximately 50 amino acid residues found in a great variety of intracellular or membrane-associated proteins.
	GO:0004197	cysteine-type endopeptidase activity	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile.
	GO:0097153	cysteine-type endopeptidase activity involved in apoptotic process	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile, and contributing to the apoptotic process.
	GO:0008234	cysteine-type peptidase activity	Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile.
	GO:0008047	enzyme activator activity	Binds to and increases the activity of an enzyme.
	GO:0016787	hydrolase activity	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3.
	GO:0008233	peptidase activity	Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid.
	GO:0005515	protein binding	Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
	GO:0019901	protein kinase binding	Interacting selectively and non-covalently with a protein kinase, any enzyme that catalyzes the transfer of a phosphate group, usually from ATP, to a protein substrate.
biological process
	GO:0006919	activation of cysteine-type endopeptidase activity involved in apoptotic process	Any process that initiates the activity of the inactive enzyme cysteine-type endopeptidase in the context of an apoptotic process.
	GO:0008635	activation of cysteine-type endopeptidase activity involved in apoptotic process by cytochrome c	Any process that initiates the activity of the inactive enzyme cysteine-type endopeptidase in the context of an apoptotic process and is mediated by cytochrome c.
	GO:0007568	aging	A developmental process that is a deterioration and loss of function over time. Aging includes loss of functions such as resistance to disease, homeostasis, and fertility, as well as wear and tear. Aging includes cellular senescence, but is more inclusive. May precede death and may succeed developmental maturation (GO:0021700).
	GO:0006915	apoptotic process	A programmed cell death process which begins when a cell receives an internal (e.g. DNA damage) or external signal (e.g. an extracellular death ligand), and proceeds through a series of biochemical events (signaling pathway phase) which trigger an execution phase. The execution phase is the last step of an apoptotic process, and is typically characterized by rounding-up of the cell, retraction of pseudopodes, reduction of cellular volume (pyknosis), chromatin condensation, nuclear fragmentation (karyorrhexis), plasma membrane blebbing and fragmentation of the cell into apoptotic bodies. When the execution phase is completed, the cell has died.
	GO:0006974	cellular response to DNA damage stimulus	Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism.
	GO:0034644	cellular response to UV	Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ultraviolet radiation (UV light) stimulus. Ultraviolet radiation is electromagnetic radiation with a wavelength in the range of 10 to 380 nanometers.
	GO:0071549	cellular response to dexamethasone stimulus	Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a dexamethasone stimulus.
	GO:0071407	cellular response to organic cyclic compound	Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an organic cyclic compound stimulus.
	GO:0097192	extrinsic apoptotic signaling pathway in absence of ligand	A series of molecular signals in which a signal is conveyed from the cell surface to trigger the apoptotic death of a cell. The pathway starts with withdrawal of a ligand from a cell surface receptor, and ends when the execution phase of apoptosis is triggered.
	GO:0034349	glial cell apoptotic process	Any apoptotic process in a glial cell, a non-neuronal cell of the nervous system.
	GO:0008630	intrinsic apoptotic signaling pathway in response to DNA damage	A series of molecular signals in which an intracellular signal is conveyed to trigger the apoptotic death of a cell. The pathway is induced by the detection of DNA damage, and ends when the execution phase of apoptosis is triggered.
	GO:0030220	platelet formation	The process in which platelets bud from long processes extended by megakaryocytes.
	GO:0043065	positive regulation of apoptotic process	Any process that activates or increases the frequency, rate or extent of cell death by apoptotic process.
	GO:0043525	positive regulation of neuron apoptotic process	Any process that activates or increases the frequency, rate or extent of cell death of neurons by apoptotic process.
	GO:0006508	proteolysis	The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds.
	GO:0042981	regulation of apoptotic process	Any process that modulates the occurrence or rate of cell death by apoptotic process.
	GO:2001020	regulation of response to DNA damage stimulus	Any process that modulates the frequency, rate or extent of response to DNA damage stimulus.
	GO:0009411	response to UV	Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ultraviolet radiation (UV light) stimulus. Ultraviolet radiation is electromagnetic radiation with a wavelength in the range of 10 to 380 nanometers.
	GO:0046677	response to antibiotic	Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an antibiotic stimulus. An antibiotic is a chemical substance produced by a microorganism which has the capacity to inhibit the growth of or to kill other microorganisms.
	GO:0032025	response to cobalt ion	Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cobalt ion stimulus.
	GO:0032355	response to estradiol	Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of stimulus by estradiol, a C18 steroid hormone hydroxylated at C3 and C17 that acts as a potent estrogen.
	GO:0032496	response to lipopolysaccharide	Any process that results in a change in state or activity of an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a lipopolysaccharide stimulus; lipopolysaccharide is a major component of the cell wall of gram-negative bacteria.
	GO:0014070	response to organic cyclic compound	Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an organic cyclic compound stimulus.
	GO:0042770	signal transduction in response to DNA damage	A cascade of processes induced by the detection of DNA damage within a cell.
cellular component
	GO:0043293	apoptosome	A multisubunit protein complex involved in the signaling phase of the apoptotic process. In mammals it is typically composed of seven Apaf-1 subunits bound to cytochrome c and caspase-9. A similar complex to promote apoptosis is formed from homologous gene products in other eukaryotic organisms.
	GO:0005737	cytoplasm	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
	GO:0005829	cytosol	The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
	GO:0005739	mitochondrion	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration.
	GO:0005634	nucleus	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.

Chain B,D,F,H,J,L,N,P (NLEF_ECO57 | Q8XAL7)

molecular function
	GO:0030414	peptidase inhibitor activity	Stops, prevents or reduces the activity of a peptidase, any enzyme that catalyzes the hydrolysis peptide bonds.
biological process
	GO:0010466	negative regulation of peptidase activity	Any process that stops or reduces the rate of peptidase activity, the hydrolysis of peptide bonds within proteins.
cellular component
	GO:0005576	extracellular region	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite.
	GO:0030430	host cell cytoplasm	The cytoplasm of a host cell.

Description

Compounds

Structural Features

Chains, Units

Ligands, Modified Residues, Ions (0, 0)

Sites (0, 0)

SS Bonds (0, 0)

Cis Peptide Bonds (8, 8)

Sequence-Structure Mapping

SAPs(SNPs)/Variants (5, 40)

PROSITE Motifs (4, 32)

Exons (7, 56)

Sequences/Alignments

Classification and Annotation

SCOP Domains (0, 0)

CATH Domains (0, 0)

Pfam Domains (0, 0)

Gene Ontology (42, 42)

Visualization

Interactive Views

Still Images

Databases and Analysis Tools

Databases

Analysis Tools

Related Entries

Entries Sharing at Least One Protein Chain (UniProt ID)

Related Entries Specified in the PDB File