3UK6 - JenaLib

Title :   CRYSTAL STRUCTURE OF THE TIP48 (TIP49B) HEXAMER

Authors :   M. Petukhov, A. Dagkessamanskaja, M. Bommer, T. Barrett, I. Tsaneva, A R. Queval, A. Shvetsov, M. Khodorkovskiy, E. Kas, M. Grigoriev

Date :   09 Nov 11 (Deposition) - 25 Jul 12 (Release) - 29 Aug 12 (Revision)

Method :   X-RAY DIFFRACTION

Resolution :   2.95

Chains :   Asym. Unit : A,B,C,D,E,F,G,H,I,J,K,L
Biol. Unit 1: A,B,C,D,I,J  (1x)
Biol. Unit 2: E,F,G,H,K,L  (1x)

Keywords :   Hexameric Aaa+ Atp-Ase, Dna Unwinding, Hydrolase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   M. Petukhov, A. Dagkessamanskaja, M. Bommer, T. Barrett, I. Tsaneva, A. Yakimov, R. Queval, A. Shvetsov, M. Khodorkovskiy, E. Kas, M. Grigoriev
Large-Scale Conformational Flexibility Determines The Properties Of Aaa+ Tip49 Atpases.
Structure V. 20 1321 2012
PubMed-ID: 22748767 | Reference-DOI: 10.1016/J.STR.2012.05.012

Compounds

Molecule 1 - RUVB-LIKE 2
	Chains	:	A, B, C, D, E, F, G, H, I, J, K, L
	EC Number	:	3.6.4.12
	Engineered	:	YES
	Expression System	:	ESCHERICHIA COLI
	Expression System Plasmid	:	PET-21B
	Expression System Strain	:	BL21-GOLD-DE3
	Expression System Taxid	:	469008
	Expression System Vector Type	:	PLASMID
	Fragment	:	UNP RESIDUES 1-132, 239-463
	Gene	:	CGI-46, INO80J, RUVBL2, TIP48, TIP49B
	Organism Common	:	HUMAN
	Organism Scientific	:	HOMO SAPIENS
	Organism Taxid	:	9606
	Synonym	:	48 KDA TATA BOX-BINDING PROTEIN-INTERACTING PROTEIN, 48 KDA TBP-INTERACTING PROTEIN, 51 KDA ERYTHROCYTE CYTOSOLIC PROTEIN, ECP- 51, INO80 COMPLEX SUBUNIT J, REPRESSING PONTIN 52, REPTIN 52, TIP49B, TIP60-ASSOCIATED PROTEIN 54-BETA, TAP54-BETA

Structural Features

Chains, Units

		1	2	3	4	5	6	7	8	9	10	11	12
Asymmetric Unit	:	A	B	C	D	E	F	G	H	I	J	K	L
Biological Unit 1 (1x)	:	A	B	C	D					I	J
Biological Unit 2 (1x)	:					E	F	G	H			K	L

Summary Information (see also Sequences/Alignments below)

Ligands, Modified Residues, Ions (1, 12)

Asymmetric Unit (1, 12)

No.	Name	Count	Type	Full Name
1	ADP	12	Ligand/Ion	ADENOSINE-5'-DIPHOSPHATE

Biological Unit 1 (1, 6)

No.	Name	Count	Type	Full Name
1	ADP	6	Ligand/Ion	ADENOSINE-5'-DIPHOSPHATE

Biological Unit 2 (1, 6)

No.	Name	Count	Type	Full Name
1	ADP	6	Ligand/Ion	ADENOSINE-5'-DIPHOSPHATE

Sites (12, 12)

Asymmetric Unit (12, 12)

No.	Name	Evidence	Residues	Description
01	AC1	SOFTWARE	ALA A:24 , HIS A:25 , HIS A:27 , GLY A:45 , MET A:46 , VAL A:47 , GLY A:80 , THR A:81 , GLY A:82 , LYS A:83 , THR A:84 , ALA A:85 , TYR A:362 , LEU A:399 , ILE A:403	BINDING SITE FOR RESIDUE ADP A 1450
02	AC2	SOFTWARE	ALA B:24 , HIS B:25 , HIS B:27 , ILE B:28 , GLY B:45 , MET B:46 , VAL B:47 , GLY B:80 , THR B:81 , GLY B:82 , LYS B:83 , THR B:84 , ALA B:85 , TYR B:362 , LEU B:399 , ILE B:403	BINDING SITE FOR RESIDUE ADP B 1450
03	AC3	SOFTWARE	ALA J:24 , HIS J:25 , HIS J:27 , GLY J:45 , VAL J:47 , PRO J:79 , GLY J:80 , THR J:81 , GLY J:82 , LYS J:83 , THR J:84 , ALA J:85 , TYR J:362 , ILE J:403	BINDING SITE FOR RESIDUE ADP J 1450
04	AC4	SOFTWARE	ALA C:24 , HIS C:25 , HIS C:27 , GLY C:45 , MET C:46 , VAL C:47 , GLY C:80 , THR C:81 , GLY C:82 , LYS C:83 , THR C:84 , ALA C:85 , TYR C:362 , LEU C:399	BINDING SITE FOR RESIDUE ADP C 1450
05	AC5	SOFTWARE	ALA I:24 , HIS I:25 , HIS I:27 , GLY I:45 , MET I:46 , VAL I:47 , GLY I:80 , THR I:81 , GLY I:82 , LYS I:83 , THR I:84 , ALA I:85 , TYR I:362	BINDING SITE FOR RESIDUE ADP I 1450
06	AC6	SOFTWARE	ALA D:24 , HIS D:25 , HIS D:27 , GLY D:45 , MET D:46 , VAL D:47 , GLY D:80 , THR D:81 , GLY D:82 , LYS D:83 , THR D:84 , ALA D:85 , TYR D:362 , ILE D:370 , LEU D:399 , ILE D:403	BINDING SITE FOR RESIDUE ADP D 1450
07	AC7	SOFTWARE	ALA H:24 , HIS H:25 , HIS H:27 , GLY H:45 , MET H:46 , VAL H:47 , GLY H:80 , THR H:81 , GLY H:82 , LYS H:83 , THR H:84 , ALA H:85 , TYR H:362 , LEU H:399 , ILE H:403	BINDING SITE FOR RESIDUE ADP H 1450
08	AC8	SOFTWARE	ALA F:24 , HIS F:25 , HIS F:27 , GLY F:45 , VAL F:47 , GLY F:80 , THR F:81 , GLY F:82 , LYS F:83 , THR F:84 , ALA F:85 , TYR F:362 , ILE F:370 , LEU F:399 , ILE F:403	BINDING SITE FOR RESIDUE ADP F 1450
09	AC9	SOFTWARE	ALA K:24 , HIS K:25 , HIS K:27 , ILE K:28 , GLY K:45 , MET K:46 , VAL K:47 , THR K:81 , GLY K:82 , LYS K:83 , THR K:84 , ALA K:85 , TYR K:362 , ILE K:403	BINDING SITE FOR RESIDUE ADP K 1450
10	BC1	SOFTWARE	ALA E:24 , HIS E:25 , HIS E:27 , GLY E:45 , MET E:46 , VAL E:47 , GLY E:80 , THR E:81 , GLY E:82 , LYS E:83 , THR E:84 , ALA E:85 , TYR E:362 , ILE E:370 , LEU E:399 , ILE E:403	BINDING SITE FOR RESIDUE ADP E 1450
11	BC2	SOFTWARE	GLY L:80 , THR L:81 , GLY L:82 , LYS L:83 , THR L:84 , ALA L:85 , TYR L:362 , LEU L:399	BINDING SITE FOR RESIDUE ADP L 1450
12	BC3	SOFTWARE	ALA G:24 , HIS G:25 , HIS G:27 , GLY G:45 , MET G:46 , VAL G:47 , GLY G:80 , THR G:81 , GLY G:82 , LYS G:83 , THR G:84 , ALA G:85 , TYR G:362 , ILE G:370 , LEU G:399 , ILE G:403	BINDING SITE FOR RESIDUE ADP G 1450

SS Bonds (0, 0)

Cis Peptide Bonds (6, 6)

Sequence-Structure Mapping

SAPs(SNPs)/Variants (0, 0)

PROSITE Motifs (0, 0)

Exons (0, 0)

Sequences/Alignments

Asymmetric Unit

Reformat:	Number of residues per line = ('0' or empty: single-line sequence representation)
	Number of residues per labelling interval =
	UniProt sequence: complete aligned part

Show mapping:	SCOP domains	CATH domains	Pfam domains	Secondary structure (by author)
	SAPs(SNPs)	PROSITE motifs	Exons
	(details for a mapped element are shown in a popup box when the mouse pointer rests over it)

Chain A from PDB  Type:PROTEIN  Length:298
 aligned with RUVB2_HUMAN | Q9Y230 from UniProtKB/Swiss-Prot  Length:463

    Alignment length:421
                                    33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193       203       213       223       233       243       253       263       273       283       293       303       313       323       333       343       353       363       373       383       393       403       413       423       433       443 
          RUVB2_HUMAN    24 AHSHIRGLGLDDALEPRQASQGMVGQLAARRAAGVVLEMIREGKIAGRAVLIAGQPGTGKTAIAMGMAQALGPDTPFTAIAGSEIFSLEMSKTEALTQAFRRSIGVRIKEETEIIEGEVVEIQIDRPATGTGSKVGKLTLKTTEMETIYDLGTKMIESLTKDKVQAGDVITIDKATGKISKLGRSFTRARDYDAMGSQTKFVQCPDGELQKRKEVVHTVSLHEIDVINSRTQGFLALFSGDTGEIKSEVREQINAKVAEWREEGKAEIIPGVLFIDEVHMLDIESFSFLNRALESDMAPVLIMATNRGITRIRGTSYQSPHGIPIDLLDRLLIVSTTPYSEKDTKQILRIRCEEEDVEMSEDAYTVLTRIGLETSLRYAIQLITAASLVCRKRKGTEVQVDDIKRVYSLFLDESRSTQYMK 444
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..................ee..ee.hhhhhhhhhhhhhhhhh......eeeeee....hhhhhhhhhhhhhh....eeeee.hhhh....hhhhhhhhhhhhh.ee..-------------------------------------------------------------------------------------------------------------.eehhhhhhhh.----.....-------.hhhhhhhhhhhhhhhhhh.---...eeeeehhhhhhhhhhhhhhhhh......eeeeee...eee......eee...hhhhhh.eeeeee...hhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhh.hhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3uk6 A  24 AHSHIRGLGLDDALEPRQASQGMVGQLAARRAAGVVLEMIREGKIAGRAVLIAGQPGTGKTAIAMGMAQALGPDTPFTAIAGSEIFSLEMSKTEALTQAFRRSIGVRI-------------------------------------------------------------------------------------------------------------TVSLHEIDVINS----FLALF-------KSEVREQINAKVAEWREEGK---IPGVLFIDEVHMLDIESFSFLNRALESDMAPVLIMATNRGITRIRGTSYQSPHGIPIDLLDRLLIVSTTPYSEKDTKQILRIRCEEEDVEMSEDAYTVLTRIGLETSLRYAIQLITAASLVCRKRKGTEVQVDDIKRVYSLFLDESRSTQYMK 444
                                    33        43        53        63        73        83        93       103       113       123       | -         -         -         -         -         -         -         -         -         -         -       243        |-   |   | -     | 273       283    |  293       303       313       323       333       343       353       363       373       383       393       403       413       423       433       443 
                                                                                                                                     131                                                                                                           241        252  257 261     269                288 292

Chain B from PDB  Type:PROTEIN  Length:300
 aligned with RUVB2_HUMAN | Q9Y230 from UniProtKB/Swiss-Prot  Length:463

    Alignment length:422
                                    32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302       312       322       332       342       352       362       372       382       392       402       412       422       432       442  
          RUVB2_HUMAN    23 GAHSHIRGLGLDDALEPRQASQGMVGQLAARRAAGVVLEMIREGKIAGRAVLIAGQPGTGKTAIAMGMAQALGPDTPFTAIAGSEIFSLEMSKTEALTQAFRRSIGVRIKEETEIIEGEVVEIQIDRPATGTGSKVGKLTLKTTEMETIYDLGTKMIESLTKDKVQAGDVITIDKATGKISKLGRSFTRARDYDAMGSQTKFVQCPDGELQKRKEVVHTVSLHEIDVINSRTQGFLALFSGDTGEIKSEVREQINAKVAEWREEGKAEIIPGVLFIDEVHMLDIESFSFLNRALESDMAPVLIMATNRGITRIRGTSYQSPHGIPIDLLDRLLIVSTTPYSEKDTKQILRIRCEEEDVEMSEDAYTVLTRIGLETSLRYAIQLITAASLVCRKRKGTEVQVDDIKRVYSLFLDESRSTQYMK 444
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...................ee..ee.hhhhhhhhhhhhhhhhh......eeeeee....hhhhhhhhhhhhhh....eeeee.hhhh....hhhhhhhhhhhhheeee.-----------------------------------------------------------------------------------------------------------..eeehhhhhhhh..---.hhhhhh.....hhhhhhhhhhhhhhh-------.ee.eeeeehhhhhhhhhhhhhhhhh......eeeeee...eee......eee...hhhhhh.eeeeee...hhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh-----..hhhhhhhhhhhh.hhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3uk6 B  23 GAHSHIRGLGLDDALEPRQASQGMVGQLAARRAAGVVLEMIREGKIAGRAVLIAGQPGTGKTAIAMGMAQALGPDTPFTAIAGSEIFSLEMSKTEALTQAFRRSIGVRI-----------------------------------------------------------------------------------------------------------VHTVSLHEIDVINSR---FLALFSGDTGEIKSEVREQINAKVAEW-------IIPGVLFIDEVHMLDIESFSFLNRALESDMAPVLIMATNRGITRIRGTSYQSPHGIPIDLLDRLLIVSTTPYSEKDTKQILRIRCEEEDVEMSEDAYTVLTRIGLETSLRYAIQLITAASLVCR-----EVQVDDIKRVYSLFLDESRSTQYMK 444
                                    32        42        52        62        72        82        92       102       112       122        |-         -         -         -         -         -         -         -         -         -         -      |242       252|   |  262       272       282|      292       302       312       322       332       342       352       362       372       382       392       402       412 |     422       432       442  
                                                                                                                                      131                                                                                                         239           253 257                       283     291                                                                                                                        414   420

Chain C from PDB  Type:PROTEIN  Length:321
 aligned with RUVB2_HUMAN | Q9Y230 from UniProtKB/Swiss-Prot  Length:463

    Alignment length:437
                                    17        27        37        47        57        67        77        87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347       357       367       377       387       397       407       417       427       437       
          RUVB2_HUMAN     8 TKVPEIRDVTRIERIGAHSHIRGLGLDDALEPRQASQGMVGQLAARRAAGVVLEMIREGKIAGRAVLIAGQPGTGKTAIAMGMAQALGPDTPFTAIAGSEIFSLEMSKTEALTQAFRRSIGVRIKEETEIIEGEVVEIQIDRPATGTGSKVGKLTLKTTEMETIYDLGTKMIESLTKDKVQAGDVITIDKATGKISKLGRSFTRARDYDAMGSQTKFVQCPDGELQKRKEVVHTVSLHEIDVINSRTQGFLALFSGDTGEIKSEVREQINAKVAEWREEGKAEIIPGVLFIDEVHMLDIESFSFLNRALESDMAPVLIMATNRGITRIRGTSYQSPHGIPIDLLDRLLIVSTTPYSEKDTKQILRIRCEEEDVEMSEDAYTVLTRIGLETSLRYAIQLITAASLVCRKRKGTEVQVDDIKRVYSLFLDESRSTQYMK 444
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .....--...........................ee..ee.hhhhhhhhhhhhhhhhh......eeeeee....hhhhhhhhhhhhhh....eeeee.hhhh....hhhhhhhhhhhhheeee.-------------------------------------------------------------------------------------------------------------.eehhhhhhhh....hhhhh.-----..hhhhhhhhhhhhhhhhhhh..eeee.eeeeehhhhhhhhhhhhhhhhh......eeeeee...eee......eee...hhhhhh.eeeeee...hhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhh.hhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3uk6 C   8 TKVPE--DVTRIERIGAHSHIRGLGLDDALEPRQASQGMVGQLAARRAAGVVLEMIREGKIAGRAVLIAGQPGTGKTAIAMGMAQALGPDTPFTAIAGSEIFSLEMSKTEALTQAFRRSIGVRI-------------------------------------------------------------------------------------------------------------TVSLHEIDVINSRTQGFLALF-----EIKSEVREQINAKVAEWREEGKAEIIPGVLFIDEVHMLDIESFSFLNRALESDMAPVLIMATNRGITRIRGTSYQSPHGIPIDLLDRLLIVSTTPYSEKDTKQILRIRCEEEDVEMSEDAYTVLTRIGLETSLRYAIQLITAASLVCRKRKGTEVQVDDIKRVYSLFLDESRSTQYMK 444
                                |  |17        27        37        47        57        67        77        87        97       107       117       127   |     -         -         -         -         -         -         -         -         -         -         -   |   247       257   |   267       277       287       297       307       317       327       337       347       357       367       377       387       397       407       417       427       437       
                               12 15                                                                                                                 131                                                                                                           241                 261   267

Chain D from PDB  Type:PROTEIN  Length:299
 aligned with RUVB2_HUMAN | Q9Y230 from UniProtKB/Swiss-Prot  Length:463

    Alignment length:421
                                    32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302       312       322       332       342       352       362       372       382       392       402       412       422       432       442 
          RUVB2_HUMAN    23 GAHSHIRGLGLDDALEPRQASQGMVGQLAARRAAGVVLEMIREGKIAGRAVLIAGQPGTGKTAIAMGMAQALGPDTPFTAIAGSEIFSLEMSKTEALTQAFRRSIGVRIKEETEIIEGEVVEIQIDRPATGTGSKVGKLTLKTTEMETIYDLGTKMIESLTKDKVQAGDVITIDKATGKISKLGRSFTRARDYDAMGSQTKFVQCPDGELQKRKEVVHTVSLHEIDVINSRTQGFLALFSGDTGEIKSEVREQINAKVAEWREEGKAEIIPGVLFIDEVHMLDIESFSFLNRALESDMAPVLIMATNRGITRIRGTSYQSPHGIPIDLLDRLLIVSTTPYSEKDTKQILRIRCEEEDVEMSEDAYTVLTRIGLETSLRYAIQLITAASLVCRKRKGTEVQVDDIKRVYSLFLDESRSTQYM 443
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .........--........ee..ee.hhhhhhhhhhhhhhhhh......eeeeee....hhhhhhhhhhhhhh....eeeee.hhhh....hhhhhhhhhhhhhee...--------------------------------------------------------------------------------------------------------------.hhhhhhhhh......---........hhhhhhhhhhhhhhh-------.ee.eeeeehhhhhhhhhhhhhhhhh......eeeeee...eee......eee...hhhhhh.eeeeee...hhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhh.hhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3uk6 D  23 GAHSHIRGL--DDALEPRQASQGMVGQLAARRAAGVVLEMIREGKIAGRAVLIAGQPGTGKTAIAMGMAQALGPDTPFTAIAGSEIFSLEMSKTEALTQAFRRSIGVRI--------------------------------------------------------------------------------------------------------------VSLHEIDVINSRTQGF---FSGDTGEIKSEVREQINAKVAEW-------IIPGVLFIDEVHMLDIESFSFLNRALESDMAPVLIMATNRGITRIRGTSYQSPHGIPIDLLDRLLIVSTTPYSEKDTKQILRIRCEEEDVEMSEDAYTVLTRIGLETSLRYAIQLITAASLVCRKRKGTEVQVDDIKRVYSLFLDESRSTQYM 443
                                    |- |      42        52        62        72        82        92       102       112       122        |-         -         -         -         -         -         -         -         -         -         -       242       252    |  262       272       282|      292       302       312       322       332       342       352       362       372       382       392       402       412       422       432       442 
                                   31 34                                                                                              131                                                                                                            242            257 261                   283     291

Chain E from PDB  Type:PROTEIN  Length:290
 aligned with RUVB2_HUMAN | Q9Y230 from UniProtKB/Swiss-Prot  Length:463

    Alignment length:422
                                    32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302       312       322       332       342       352       362       372       382       392       402       412       422       432       442  
          RUVB2_HUMAN    23 GAHSHIRGLGLDDALEPRQASQGMVGQLAARRAAGVVLEMIREGKIAGRAVLIAGQPGTGKTAIAMGMAQALGPDTPFTAIAGSEIFSLEMSKTEALTQAFRRSIGVRIKEETEIIEGEVVEIQIDRPATGTGSKVGKLTLKTTEMETIYDLGTKMIESLTKDKVQAGDVITIDKATGKISKLGRSFTRARDYDAMGSQTKFVQCPDGELQKRKEVVHTVSLHEIDVINSRTQGFLALFSGDTGEIKSEVREQINAKVAEWREEGKAEIIPGVLFIDEVHMLDIESFSFLNRALESDMAPVLIMATNRGITRIRGTSYQSPHGIPIDLLDRLLIVSTTPYSEKDTKQILRIRCEEEDVEMSEDAYTVLTRIGLETSLRYAIQLITAASLVCRKRKGTEVQVDDIKRVYSLFLDESRSTQYMK 444
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...................ee..ee.hhhhhhhhhhhhhhhhh......eeeeee....hhhhhhhhhhhhhh....eeeee.hhhh....hhhhhhhhhhhh...----------------------------------------------------------------------------------------------------------------..hhhhhhhhh...------------..--.hhhhhhhhhhhhhh------...eeeeehhhhhhhhhhhhhhhhh......eeeeee...eee......eee...hhhhhh.eeeeee...hhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhh.hhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3uk6 E  23 GAHSHIRGLGLDDALEPRQASQGMVGQLAARRAAGVVLEMIREGKIAGRAVLIAGQPGTGKTAIAMGMAQALGPDTPFTAIAGSEIFSLEMSKTEALTQAFRRSIG----------------------------------------------------------------------------------------------------------------TVSLHEIDVINSRT------------EI--EVREQINAKVAEWRE------IPGVLFIDEVHMLDIESFSFLNRALESDMAPVLIMATNRGITRIRGTSYQSPHGIPIDLLDRLLIVSTTPYSEKDTKQILRIRCEEEDVEMSEDAYTVLTRIGLETSLRYAIQLITAASLVCRKRKGTEVQVDDIKRVYSLFLDESRSTQYMK 444
                                    32        42        52        62        72        82        92       102       112       122     |   -         -         -         -         -         -         -         -         -         -         -       242       252 |       -    || 272       282  |    292       302       312       322       332       342       352       362       372       382       392       402       412       422       432       442  
                                                                                                                                   128                                                                                                              241          254          267|  |           285    292                                                                                                                                                        
                                                                                                                                                                                                                                                                               268  |                                                                                                                                                                             
                                                                                                                                                                                                                                                                                  271

Chain F from PDB  Type:PROTEIN  Length:301
 aligned with RUVB2_HUMAN | Q9Y230 from UniProtKB/Swiss-Prot  Length:463

    Alignment length:431
                                    32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302       312       322       332       342       352       362       372       382       392       402       412       422       432       442       452 
          RUVB2_HUMAN    23 GAHSHIRGLGLDDALEPRQASQGMVGQLAARRAAGVVLEMIREGKIAGRAVLIAGQPGTGKTAIAMGMAQALGPDTPFTAIAGSEIFSLEMSKTEALTQAFRRSIGVRIKEETEIIEGEVVEIQIDRPATGTGSKVGKLTLKTTEMETIYDLGTKMIESLTKDKVQAGDVITIDKATGKISKLGRSFTRARDYDAMGSQTKFVQCPDGELQKRKEVVHTVSLHEIDVINSRTQGFLALFSGDTGEIKSEVREQINAKVAEWREEGKAEIIPGVLFIDEVHMLDIESFSFLNRALESDMAPVLIMATNRGITRIRGTSYQSPHGIPIDLLDRLLIVSTTPYSEKDTKQILRIRCEEEDVEMSEDAYTVLTRIGLETSLRYAIQLITAASLVCRKRKGTEVQVDDIKRVYSLFLDESRSTQYMKEYQDAFLFN 453
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...................ee..ee.hhhhhhhhhhhhhhhhh......eeeeee....hhhhhhhhhhhhhh....eeeee.hhhh....hhhhhhhhhhhhheeee.-----------------------------------------------------------------------------------------------------------..eeehhhhhhhh---------------..hhhhhhhhhhhhhhhh------.ee.eeeeehhhhhhhhhhhhhhhhh......eeeeee...eee......eee...hhhhhh.eeeeee...hhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.--..hhhhhhhhhhhh.hhhhhhhhhh......... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3uk6 F  23 GAHSHIRGLGLDDALEPRQASQGMVGQLAARRAAGVVLEMIREGKIAGRAVLIAGQPGTGKTAIAMGMAQALGPDTPFTAIAGSEIFSLEMSKTEALTQAFRRSIGVRI-----------------------------------------------------------------------------------------------------------VHTVSLHEIDVIN---------------EIKSEVREQINAKVAEWR------IIPGVLFIDEVHMLDIESFSFLNRALESDMAPVLIMATNRGITRIRGTSYQSPHGIPIDLLDRLLIVSTTPYSEKDTKQILRIRCEEEDVEMSEDAYTVLTRIGLETSLRYAIQLITAASLVCRKRK--EVQVDDIKRVYSLFLDESRSTQYMKEYQDAFLFN 453
                                    32        42        52        62        72        82        92       102       112       122        |-         -         -         -         -         -         -         -         -         -         -      |242        |-         -    |  272       282 |     292       302       312       322       332       342       352       362       372       382       392       402       412    |  422       432       442       452 
                                                                                                                                      131                                                                                                         239         251             267              284    291                                                                                                                           417  |                                 
                                                                                                                                                                                                                                                                                                                                                                                                                                       420

Chain G from PDB  Type:PROTEIN  Length:330
 aligned with RUVB2_HUMAN | Q9Y230 from UniProtKB/Swiss-Prot  Length:463

    Alignment length:438
                                    16        26        36        46        56        66        76        86        96       106       116       126       136       146       156       166       176       186       196       206       216       226       236       246       256       266       276       286       296       306       316       326       336       346       356       366       376       386       396       406       416       426       436        
          RUVB2_HUMAN     7 TTKVPEIRDVTRIERIGAHSHIRGLGLDDALEPRQASQGMVGQLAARRAAGVVLEMIREGKIAGRAVLIAGQPGTGKTAIAMGMAQALGPDTPFTAIAGSEIFSLEMSKTEALTQAFRRSIGVRIKEETEIIEGEVVEIQIDRPATGTGSKVGKLTLKTTEMETIYDLGTKMIESLTKDKVQAGDVITIDKATGKISKLGRSFTRARDYDAMGSQTKFVQCPDGELQKRKEVVHTVSLHEIDVINSRTQGFLALFSGDTGEIKSEVREQINAKVAEWREEGKAEIIPGVLFIDEVHMLDIESFSFLNRALESDMAPVLIMATNRGITRIRGTSYQSPHGIPIDLLDRLLIVSTTPYSEKDTKQILRIRCEEEDVEMSEDAYTVLTRIGLETSLRYAIQLITAASLVCRKRKGTEVQVDDIKRVYSLFLDESRSTQYMK 444
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ...................................ee..ee.hhhhhhhhhhhhhhhhh......eeeeee....hhhhhhhhhhhhhh....eeeee.hhhh....hhhhhhhhhhhhheeee..-.----------------------------------------------------------------------------------------------------------.eehhhhhhhh...hhhhhh........hhhhhhhhhhhhhhhhhhh-.eeee.eeeeehhhhhhhhhhhhhhhhh......eeeeee...eee......eee...hhhhhh.eeeeee...hhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhh.hhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 3uk6 G   7 TTKVPEIRDVTRIERIGAHSHIRGLGLDDALEPRQASQGMVGQLAARRAAGVVLEMIREGKIAGRAVLIAGQPGTGKTAIAMGMAQALGPDTPFTAIAGSEIFSLEMSKTEALTQAFRRSIGVRIK-A----------------------------------------------------------------------------------------------------------TVSLHEIDVINSRTQGFLALFSGDTGEIKSEVREQINAKVAEWREEG-AEIIPGVLFIDEVHMLDIESFSFLNRALESDMAPVLIMATNRGITRIRGTSYQSPHGIPIDLLDRLLIVSTTPYSEKDTKQILRIRCEEEDVEMSEDAYTVLTRIGLETSLRYAIQLITAASLVCRKRKGTEVQVDDIKRVYSLFLDESRSTQYMK 444
                                    16        26        36        46        56        66        76        86        96       106       116       126     | | -         -         -         -         -         -         -         -         -         -         -    |  246       256       266       276       286| |    296       306       316       326       336       346       356       366       376       386       396       406       416       426       436        
                                                                                                                                                       132 |                                                                                                        241                                           287 |                                                                                                                                                           
                                                                                                                                                         236                                                                                                                                                        289

Chain H from PDB  Type:PROTEIN  Length:277
 aligned with RUVB2_HUMAN | Q9Y230 from UniProtKB/Swiss-Prot  Length:463

    Alignment length:423
                                    31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391       401       411       421       431       441   
          RUVB2_HUMAN    22 IGAHSHIRGLGLDDALEPRQASQGMVGQLAARRAAGVVLEMIREGKIAGRAVLIAGQPGTGKTAIAMGMAQALGPDTPFTAIAGSEIFSLEMSKTEALTQAFRRSIGVRIKEETEIIEGEVVEIQIDRPATGTGSKVGKLTLKTTEMETIYDLGTKMIESLTKDKVQAGDVITIDKATGKISKLGRSFTRARDYDAMGSQTKFVQCPDGELQKRKEVVHTVSLHEIDVINSRTQGFLALFSGDTGEIKSEVREQINAKVAEWREEGKAEIIPGVLFIDEVHMLDIESFSFLNRALESDMAPVLIMATNRGITRIRGTSYQSPHGIPIDLLDRLLIVSTTPYSEKDTKQILRIRCEEEDVEMSEDAYTVLTRIGLETSLRYAIQLITAASLVCRKRKGTEVQVDDIKRVYSLFLDESRSTQYMK 444
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ........--------....ee..ee.hhhhhhhhhhhhhhh-------.eeeeee....hhhhhhhhhhhhhh....eeeee.hhhh....hhhhhhhhhhhhh...---------------------------------------------------------------------------------------------------------------..hhhhhhhhh.--------..----..hhhhhhhhhhhhhhh--------...eeeeehhhhhhhhhhhhhhhhh......eeeeee...eee......eee...hhhhhh.eeeeee...hhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhh.hhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3uk6 H  22 IGAHSHIR--------EPRQASQGMVGQLAARRAAGVVLEMI-------RAVLIAGQPGTGKTAIAMGMAQALGPDTPFTAIAGSEIFSLEMSKTEALTQAFRRSIGV---------------------------------------------------------------------------------------------------------------TVSLHEIDVINS--------FS----EIKSEVREQINAKVAEW--------IPGVLFIDEVHMLDIESFSFLNRALESDMAPVLIMATNRGITRIRGTSYQSPHGIPIDLLDRLLIVSTTPYSEKDTKQILRIRCEEEDVEMSEDAYTVLTRIGLETSLRYAIQLITAASLVCRKRKGTEVQVDDIKRVYSLFLDESRSTQYMK 444
                                   | -      | 41        51        61 |      71        81        91       101       111       121       | -         -         -         -         -         -         -         -         -         -         -       241       251|      261|    | 271       281 |       -|      301       311       321       331       341       351       361       371       381       391       401       411       421       431       441   
                                  29       38                       63      71                                                       129                                                                                                             241        252      261|  267             283      292                                                                                                                                                        
                                                                                                                                                                                                                                                                          262

Chain I from PDB  Type:PROTEIN  Length:294
 aligned with RUVB2_HUMAN | Q9Y230 from UniProtKB/Swiss-Prot  Length:463

    Alignment length:423
                                    32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302       312       322       332       342       352       362       372       382       392       402       412       422       432       442   
          RUVB2_HUMAN    23 GAHSHIRGLGLDDALEPRQASQGMVGQLAARRAAGVVLEMIREGKIAGRAVLIAGQPGTGKTAIAMGMAQALGPDTPFTAIAGSEIFSLEMSKTEALTQAFRRSIGVRIKEETEIIEGEVVEIQIDRPATGTGSKVGKLTLKTTEMETIYDLGTKMIESLTKDKVQAGDVITIDKATGKISKLGRSFTRARDYDAMGSQTKFVQCPDGELQKRKEVVHTVSLHEIDVINSRTQGFLALFSGDTGEIKSEVREQINAKVAEWREEGKAEIIPGVLFIDEVHMLDIESFSFLNRALESDMAPVLIMATNRGITRIRGTSYQSPHGIPIDLLDRLLIVSTTPYSEKDTKQILRIRCEEEDVEMSEDAYTVLTRIGLETSLRYAIQLITAASLVCRKRKGTEVQVDDIKRVYSLFLDESRSTQYMKE 445
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .........----......ee..ee.hhhhhhhhhhhhhhhhh......eeeeee....hhhhhhhhhhhhhh....eeeee.hhhh....hhhhhhhhhhhhh.-------------------------------------------------------------------------------------------------------------------.hhhhhhhh...hhhhh....--...hhhhhhhhhhhhhhhhhhh---....eeeeehhhhhhhhhhhhhhhhh......eeeeee...eee......eee...hhhhhh.eeeeee...hhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhh-----....hhhhhhhhhhheehhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3uk6 I  23 GAHSHIRGL----ALEPRQASQGMVGQLAARRAAGVVLEMIREGKIAGRAVLIAGQPGTGKTAIAMGMAQALGPDTPFTAIAGSEIFSLEMSKTEALTQAFRRSI-------------------------------------------------------------------------------------------------------------------SLHEIDVINSRTQGFLALFSG--GEIKSEVREQINAKVAEWREEG---IIPGVLFIDEVHMLDIESFSFLNRALESDMAPVLIMATNRGITRIRGTSYQSPHGIPIDLLDRLLIVSTTPYSEKDTKQILRIRCEEEDVEMSEDAYTVLTRIGLETSLRYAIQLITAASLV-----GTEVQVDDIKRVYSLFLDESRSTQYMKE 445
                                    |-   |    42        52        62        72        82        92       102       112       122    |    -         -         -         -         -         -         -         -         -         -         -         -|      252       262|  |   272       282    |  292       302       312       322       332       342       352       362       372       382       392       402       412     | 422       432       442   
                                   31   36                                                                                        127                                                                                                                 243                 263  |                  287 291                                                                                                                      412   418                           
                                                                                                                                                                                                                                                                             266

Chain J from PDB  Type:PROTEIN  Length:300
 aligned with RUVB2_HUMAN | Q9Y230 from UniProtKB/Swiss-Prot  Length:463

    Alignment length:435
                                    17        27        37        47        57        67        77        87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347       357       367       377       387       397       407       417       427       437     
          RUVB2_HUMAN     8 TKVPEIRDVTRIERIGAHSHIRGLGLDDALEPRQASQGMVGQLAARRAAGVVLEMIREGKIAGRAVLIAGQPGTGKTAIAMGMAQALGPDTPFTAIAGSEIFSLEMSKTEALTQAFRRSIGVRIKEETEIIEGEVVEIQIDRPATGTGSKVGKLTLKTTEMETIYDLGTKMIESLTKDKVQAGDVITIDKATGKISKLGRSFTRARDYDAMGSQTKFVQCPDGELQKRKEVVHTVSLHEIDVINSRTQGFLALFSGDTGEIKSEVREQINAKVAEWREEGKAEIIPGVLFIDEVHMLDIESFSFLNRALESDMAPVLIMATNRGITRIRGTSYQSPHGIPIDLLDRLLIVSTTPYSEKDTKQILRIRCEEEDVEMSEDAYTVLTRIGLETSLRYAIQLITAASLVCRKRKGTEVQVDDIKRVYSLFLDESRSTQY 442
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .....---..........................ee..ee.hhhhhhhhhhhhhhhhh......eeeeee....hhhhhhhhhhhhhh....eeeee.hhhh....hhhhhhhhhhhhheee..-------------------------------------------------------------------------------------------------------------.eehhhhhhhh...--.....---....hhhhhhhhhhhhhhhh------.ee.eeeeehhhhhhhhhhhhhhhhh......eeeeee...eee......eee...hhhhhh.eeeeee...hhhhhhhhhhhhhhhh.--.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh----------.hhhhhh.hhhhhhhh Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3uk6 J   8 TKVPE---VTRIERIGAHSHIRGLGLDDALEPRQASQGMVGQLAARRAAGVVLEMIREGKIAGRAVLIAGQPGTGKTAIAMGMAQALGPDTPFTAIAGSEIFSLEMSKTEALTQAFRRSIGVRI-------------------------------------------------------------------------------------------------------------TVSLHEIDVINSRT--FLALF---TGEIKSEVREQINAKVAEWR------IIPGVLFIDEVHMLDIESFSFLNRALESDMAPVLIMATNRGITRIRGTSYQSPHGIPIDLLDRLLIVSTTPYSEKDTKQILRIRCEEED--MSEDAYTVLTRIGLETSLRYAIQLITAASLVCRKR----------KRVYSLFLDESRSTQY 442
                                |   17        27        37        47        57        67        77        87        97       107       117       127   |     -         -         -         -         -         -         -         -         -         -         -   |   247      |257   |   267       277      |  -   |   297       307       317       327       337       347       357       367       377 |  |  387       397       407        |-       427       437     
                               12  16                                                                                                                131                                                                                                           241          254  | 261 265                284    291                                                                                     379  |                               416        427               
                                                                                                                                                                                                                                                                                   257                                                                                                                          382

Chain K from PDB  Type:PROTEIN  Length:283
 aligned with RUVB2_HUMAN | Q9Y230 from UniProtKB/Swiss-Prot  Length:463

    Alignment length:422
                                    32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302       312       322       332       342       352       362       372       382       392       402       412       422       432       442  
          RUVB2_HUMAN    23 GAHSHIRGLGLDDALEPRQASQGMVGQLAARRAAGVVLEMIREGKIAGRAVLIAGQPGTGKTAIAMGMAQALGPDTPFTAIAGSEIFSLEMSKTEALTQAFRRSIGVRIKEETEIIEGEVVEIQIDRPATGTGSKVGKLTLKTTEMETIYDLGTKMIESLTKDKVQAGDVITIDKATGKISKLGRSFTRARDYDAMGSQTKFVQCPDGELQKRKEVVHTVSLHEIDVINSRTQGFLALFSGDTGEIKSEVREQINAKVAEWREEGKAEIIPGVLFIDEVHMLDIESFSFLNRALESDMAPVLIMATNRGITRIRGTSYQSPHGIPIDLLDRLLIVSTTPYSEKDTKQILRIRCEEEDVEMSEDAYTVLTRIGLETSLRYAIQLITAASLVCRKRKGTEVQVDDIKRVYSLFLDESRSTQYMK 444
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...................ee..ee.hhhhhhhhhhhhhhhhh..-...eeeeee.--.hhhhhhhhhhhhhh....eeeee.hhhh....hhhhhhhh-hhhh......-------------------------------------------------------------------------------------------------------------.hhhhhhhhh..-------------..---.hhhhhhhhhhhhhh------..eeeeehhhhhhhhhhhhhhhhh......eeeeee...eee......eee...hhhhhh.eeeeee...hhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.----.hhhhhhhhhhh.hhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3uk6 K  23 GAHSHIRGLGLDDALEPRQASQGMVGQLAARRAAGVVLEMIREGK-AGRAVLIAGQ--TGKTAIAMGMAQALGPDTPFTAIAGSEIFSLEMSKTEALTQ-FRRSIGVRIK-------------------------------------------------------------------------------------------------------------VSLHEIDVINSR-------------EI---VREQINAKVAEWREE------PGVLFIDEVHMLDIESFSFLNRALESDMAPVLIMATNRGITRIRGTSYQSPHGIPIDLLDRLLIVSTTPYSEKDTKQILRIRCEEEDVEMSEDAYTVLTRIGLETSLRYAIQLITAASLVCRKRK----QVDDIKRVYSLFLDESRSTQYMK 444
                                    32        42        52        62    | | 72     |  82        92       102       112        |-|      132         -         -         -         -         -         -         -         -         -         -       242       252|        -    || 272       282   |     -|      302       312       322       332       342       352       362       372       382       392       402       412    |  422       432       442  
                                                                       67 |       78 81                                     121 |      132                                                                                                           242        253           267| 272           286    293                                                                                                                         417  422                      
                                                                         69                                                   123                                                                                                                                              268

Chain L from PDB  Type:PROTEIN  Length:233
 aligned with RUVB2_HUMAN | Q9Y230 from UniProtKB/Swiss-Prot  Length:463

    Alignment length:411
                                    43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193       203       213       223       233       243       253       263       273       283       293       303       313       323       333       343       353       363       373       383       393       403       413       423       433       443 
          RUVB2_HUMAN    34 DDALEPRQASQGMVGQLAARRAAGVVLEMIREGKIAGRAVLIAGQPGTGKTAIAMGMAQALGPDTPFTAIAGSEIFSLEMSKTEALTQAFRRSIGVRIKEETEIIEGEVVEIQIDRPATGTGSKVGKLTLKTTEMETIYDLGTKMIESLTKDKVQAGDVITIDKATGKISKLGRSFTRARDYDAMGSQTKFVQCPDGELQKRKEVVHTVSLHEIDVINSRTQGFLALFSGDTGEIKSEVREQINAKVAEWREEGKAEIIPGVLFIDEVHMLDIESFSFLNRALESDMAPVLIMATNRGITRIRGTSYQSPHGIPIDLLDRLLIVSTTPYSEKDTKQILRIRCEEEDVEMSEDAYTVLTRIGLETSLRYAIQLITAASLVCRKRKGTEVQVDDIKRVYSLFLDESRSTQYMK 444
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .....------------.hhhhhhhhhhhhh-----..eeeeee....hhhhhhhhhhhhh------.eee.hhhh--..hhhhhhhhhhhh---...---------------------------------------------------------------------------------------------------------------.hhhhhhhh...------------..hhhhhhhhhhhhhhhh.------...eeeeehhhhhhhhhhhhhhhhh......eeeeee...eee......eee...hhhhhh.eeeeee...hhhhhhhhhhhhhhh---...-------.hhhhhhhhhhhhhh----...-------..hhhhhhhhhhhh.hhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3uk6 L  34 DDALE------------AARRAAGVVLEMIR-----GRAVLIAGQPGTGKTAIAMGMAQAL------TAIAGSEIF--EMSKTEALTQAFRR---VRI---------------------------------------------------------------------------------------------------------------SLHEIDVINSRT------------EIKSEVREQINAKVAEWRE------IPGVLFIDEVHMLDIESFSFLNRALESDMAPVLIMATNRGITRIRGTSYQSPHGIPIDLLDRLLIVSTTPYSEKDTKQILRIRCEE---EMS-------TRIGLETSLRYAIQL----SLV-------EVQVDDIKRVYSLFLDESRSTQYMK 444
                                |    -       |53        63|     | 73        83        93|      103     | 113       123 |   | | -         -         -         -         -         -         -         -         -         -         -       243       253|        -   |   273       283 |     293       303       313       323       333       343       353       363       373   |   383       393       403 |    | |-      |423       433       443 
                               38           51           64    70                      94    101     109  |          125 129 |                                                                                                             243        254          267               285    292                                                                                  377 381 |     391           405  410 |     420                        
                                                                                                        112                131                                                                                                                                                                                                                                                         383                          412

Legend:		→ Mismatch	(orange background)
	-	→ Gap	(green background, '-', border residues have a numbering label)
		→ Modified Residue	(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
	x	→ Chemical Group	(purple background, 'x', labelled with number + name, e.g. ACE or NH2)
	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '\|'

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SCOP Domains (0, 0)

CATH Domains (0, 0)

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Gene Ontology (51, 51)

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		Gly B:263 - Asp B:264	[ RasMol ]
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	3uk6
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Description