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(-) Description

Title :  MAP KINASE LMAMPK10 FROM LEISHMANIA MAJOR IN COMPLEX WITH SB203580
 
Authors :  S. Horjales, D. Schmidt-Arras, O. Leclercq, G. Spath, A. Buschiazzo
Date :  04 Nov 11  (Deposition) - 19 Sep 12  (Release) - 31 Oct 12  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.65
Chains :  Asym./Biol. Unit :  A
Keywords :  Eukariotic Protein Kinase Fold, Transferase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  S. Horjales, D. Schmidt-Arras, R. R. Limardo, O. Leclercq, G. Obal, E. Prina, A. G. Turjanski, G. F. Spath, A. Buschiazzo
The Crystal Structure Of The Map Kinase Lmampk10 From Leishmania Major Reveals Parasite-Specific Features And Regulatory Mechanisms.
Structure V. 20 1649 2012
PubMed-ID: 22884419  |  Reference-DOI: 10.1016/J.STR.2012.07.005

(-) Compounds

Molecule 1 - MITOGEN-ACTIVATED PROTEIN KINASE
    Chains: A
    EC Number: 2.7.11.1
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PQE80
    Expression System Strain: TOP10 F
    Expression System Taxid: 562
    Expression System Vector Type: PLASMID
    Gene: LMJF10.0200, LMJF_10_0200
    Organism Scientific: LEISHMANIA MAJOR
    Organism Taxid: 5664

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit : A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 1)

Asymmetric/Biological Unit (1, 1)
No.NameCountTypeFull Name
1SB21Ligand/Ion4-[5-(4-FLUORO-PHENYL)-2-(4-METHANESULFINYL-PHENYL)-3H-IMIDAZOL-4-YL]-PYRIDINE

(-) Sites  (1, 1)

Asymmetric Unit (1, 1)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREALA A:49 , LEU A:110 , THR A:112 , GLU A:113 , MET A:115 , HIS A:160 , GLY A:162 , ASP A:176BINDING SITE FOR RESIDUE SB2 A 362

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 3UIB)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 3UIB)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 3UIB)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 3UIB)

(-) Exons   (0, 0)

(no "Exon" information available for 3UIB)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:309
 aligned with Q4QHJ8_LEIMA | Q4QHJ8 from UniProtKB/TrEMBL  Length:407

    Alignment length:353
                                    16        26        36        46        56        66        76        86        96       106       116       126       136       146       156       166       176       186       196       206       216       226       236       246       256       266       276       286       296       306       316       326       336       346       356   
         Q4QHJ8_LEIMA     7 AAMRDLIAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAREDTADANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRHPYFESLFDPLDLTEGLSERFHFDESVTDVYDMHKIFTAEVERF 359
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhh...--------...------..eeeeee.....eeeeee....-------....hhhhhhhhhhhhhhhhhh.......eee.-----------.eeeee...eehhhhhh......hhhhhhhhhhhhhhhhhhhhhh...........eee.....eee.....------------.hhhhhh.hhhhhh.......hhhhhhhhhhhhhhhhh.......hhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhh..........hhhhhh...hhhhhhhhhhhh........hhhhhhhhhhhh...hhhhhh...............hhhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3uib A   7 AAMRDLIAEL--------VQR------YGAVCAGVDSEGIPVAIKRVFNT-------NILSDSFLCKRVLREIRLLNHFHHPNILGLRDI-----------LYLVTELMRTDLAQVIHDQRIVISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNL------------YVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRHPYFESLFDPLDLTEGLSERFHFDESVTDVYDMHKIFTAEVERF 359
                                    16        26|      |36        46        56       |66        76        86        96         - |     116       126       136       146       156       166       176  |      -     | 196       206       216       226       236       246       256       266       276       286       296       306       316       326       336       346       356   
                                    16       25 |     34                    56      64                              96         108                                                                    179          192                                                                                                                                                                       
                                               27
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 3UIB)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 3UIB)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 3UIB)

(-) Gene Ontology  (5, 5)

Asymmetric/Biological Unit(hide GO term definitions)
Chain A   (Q4QHJ8_LEIMA | Q4QHJ8)
molecular function
    GO:0005524    ATP binding    Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
    GO:0016301    kinase activity    Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule.
    GO:0004672    protein kinase activity    Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP.
biological process
    GO:0016310    phosphorylation    The process of introducing a phosphate group into a molecule, usually with the formation of a phosphoric ester, a phosphoric anhydride or a phosphoric amide.
    GO:0006468    protein phosphorylation    The process of introducing a phosphate group on to a protein.

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/TrEMBL
        Q4QHJ8_LEIMA | Q4QHJ8: 3pg1

(-) Related Entries Specified in the PDB File

3pg1 .THE CRYSTAL STRUCTURE OF THE MAP KINASE LMAMPK10 FROM LEISHMANIA MAJOR