3UI6 - JenaLib

Asymmetric Unit (8, 8)

No.	Name	Evidence	Residues	Description
1	AC1	SOFTWARE	ASP A:74 , LYS A:75 , ALA A:76 , ARG A:77 , HOH A:5007 , HOH A:5023 , HOH A:5039 , HOH A:5054 , HOH A:5060 , HOH A:5073 , HOH A:5135	BINDING SITE FOR RESIDUE SO4 A 2001
2	AC2	SOFTWARE	GLY A:83 , TRP A:84 , VAL A:91 , GLY A:92 , HOH A:5049 , HOH A:5100 , HOH A:5105 , HOH A:5114 , HOH A:5172	BINDING SITE FOR RESIDUE SO4 A 2002
3	AC3	SOFTWARE	ARG A:87 , GLN A:95 , HOH A:5026 , HOH A:5034 , HOH A:5066 , HOH A:5144	BINDING SITE FOR RESIDUE SO4 A 2003
4	AC4	SOFTWARE	GLY A:105 , MET A:106 , ASP A:107 , LYS A:108 , LYS A:117 , HOH A:5028 , HOH A:5051 , HOH A:5123 , HOH A:5167 , HOH A:5171	BINDING SITE FOR RESIDUE SO4 A 2004
5	AC5	SOFTWARE	LYS A:47 , GLY A:49 , LYS A:50 , HOH A:5027 , HOH A:5067 , HOH A:5140	BINDING SITE FOR RESIDUE SO4 A 2005
6	AC6	SOFTWARE	HIS A:42 , ASP A:74 , TRP A:84 , MET A:85 , PHE A:120 , HIS A:123 , LYS A:131 , HOH A:5156	BINDING SITE FOR RESIDUE D1D A 2006
7	AC7	SOFTWARE	HIS A:48 , LYS A:59 , ASP A:107 , HOH A:5094 , HOH A:5117	BINDING SITE FOR RESIDUE NA A 2007
8	AC8	SOFTWARE	VAL A:91 , PRO A:93 , THR A:118 , LYS A:119 , HOH A:5114 , HOH A:5149	BINDING SITE FOR RESIDUE NA A 2008

SS Bonds (0, 0)

Cis Peptide Bonds (1, 1)

Sequence-Structure Mapping

SAPs(SNPs)/Variants (0, 0)

PROSITE Motifs (1, 1)

Exons (0, 0)

Sequences/Alignments

Asymmetric/Biological Unit

Reformat:	Number of residues per line = ('0' or empty: single-line sequence representation)
	Number of residues per labelling interval =
	UniProt sequence: complete aligned part

Show mapping:	SCOP domains	CATH domains	Pfam domains	Secondary structure (by author)
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Chain A from PDB  Type:PROTEIN  Length:101
 aligned with PIN4_HUMAN | Q9Y237 from UniProtKB/Swiss-Prot  Length:131

    Alignment length:102
                                    39        49        59        69        79        89        99       109       119       129  
           PIN4_HUMAN    30 GPKGGGNAVKVRHILCEKHGKIMEAMEKLKSGMRFNEVAAQYSEDKARQGGDLGWMTRGSMVGPFQEAAFALPVSGMDKPVFTDPPVKTKFGYHIIMVEGRK 131
               SCOP domains d3ui 6a_ A: automated matches                                                                          SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author hhhh-h.eeeeeeeee.hhhhhhhhhhhhhh..hhhhhhhhhh..hhhhh.eeeeee....hhhhhhhhhh...............eee..eeeeeeeeee. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE -----PPIC_PPIASE_2  PDB: A:36-129 UniProt: 35-129                                                   -- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------ Transcript
                 3ui6 A  -4 GPMG-SNAVKVRHILCEKHGKIMEAMEKLKSGMRFNEVAAQYSEDKARQGGDLGWMTRGSMVGPFQEAAFALPVSGMDKPVFTDPPVKTKFGYHIIMVEGRK 131
                               | || 39        49        59        69        79        89        99       109       119       129  
                              -1 0|                                                                                               
                                 36

Legend:		→ Mismatch	(orange background)
	-	→ Gap	(green background, '-', border residues have a numbering label)
		→ Modified Residue	(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
	x	→ Chemical Group	(purple background, 'x', labelled with number + name, e.g. ACE or NH2)
	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '\|'

Classification and Annotation

SCOP Domains (1, 1)

CATH Domains (0, 0)

Pfam Domains (0, 0)

Gene Ontology (17, 17)

Asymmetric/Biological Unit(hide GO term definitions)

Chain A (PIN4_HUMAN | Q9Y237)

molecular function
	GO:0003677	DNA binding	Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).
	GO:0003681	bent DNA binding	Interacting selectively and non-covalently with DNA in a bent conformation.
	GO:0003690	double-stranded DNA binding	Interacting selectively and non-covalently with double-stranded DNA.
	GO:0016853	isomerase activity	Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5.
	GO:0003755	peptidyl-prolyl cis-trans isomerase activity	Catalysis of the reaction: peptidyl-proline (omega=180) = peptidyl-proline (omega=0).
	GO:0005515	protein binding	Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
biological process
	GO:0000413	protein peptidyl-prolyl isomerization	The modification of a protein by cis-trans isomerization of a proline residue.
	GO:0006364	rRNA processing	Any process involved in the conversion of a primary ribosomal RNA (rRNA) transcript into one or more mature rRNA molecules.
cellular component
	GO:0005737	cytoplasm	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
	GO:0005856	cytoskeleton	Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles.
	GO:0070062	extracellular exosome	A vesicle that is released into the extracellular region by fusion of the limiting endosomal membrane of a multivesicular body with the plasma membrane. Extracellular exosomes, also simply called exosomes, have a diameter of about 40-100 nm.
	GO:0005759	mitochondrial matrix	The gel-like material, with considerable fine structure, that lies in the matrix space, or lumen, of a mitochondrion. It contains the enzymes of the tricarboxylic acid cycle and, in some organisms, the enzymes concerned with fatty acid oxidation.
	GO:0005739	mitochondrion	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration.
	GO:0005730	nucleolus	A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome.
	GO:0005634	nucleus	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
	GO:0030684	preribosome	Any complex of pre-rRNAs, ribosomal proteins, and associated proteins formed during ribosome biogenesis.
	GO:0005819	spindle	The array of microtubules and associated molecules that forms between opposite poles of a eukaryotic cell during mitosis or meiosis and serves to move the duplicated chromosomes apart.

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		Asp A:113 - Pro A:114	[ RasMol ]

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	3ui6
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	PIN4_HUMAN \| Q9Y237
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	5.2.1.8
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Description

Compounds

Structural Features

Chains, Units

Ligands, Modified Residues, Ions (3, 8)

Sites (8, 8)