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Title :   CRYSTAL STRUCTURE OF PETROBACTIN BIOSYNTHESIS PROTEIN ASBB FROM BACILLUS ANTHRACIS STR. STERNE

Authors :   Y. Kim, W. Eschenfeldt, L. Stols, A. Joachimiak, Midwest Center For Structural Genomics (Mcsg)

Date :   03 Sep 11 (Deposition) - 05 Oct 11 (Release) - 06 Jun 12 (Revision)

Method :   X-RAY DIFFRACTION

Resolution :   2.38

Chains :   Asym./Biol. Unit : A,B

Keywords :   Structural Genomics, Psi-Biology, Midwest Center For Structural Genomics, Mcsg, Alpha-Beta Structure, Adenylation, Cytosol, Biosynthetic Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   T. D. Nusca, Y. Kim, N. Maltseva, J. Y. Lee, W. Eschenfeldt, L. Stols, M. M. Schofield, J. B. Scaglione, S. D. Dixon, D. Oves-Costales, G. L. Challis, P. C. Hanna, B. F. Pfleger, A. Joachimiak, D. H. Sherman
Functional And Structural Analysis Of The Siderophore Synthetase Asbb Through Reconstitution Of The Petrobactin Biosynthetic Pathway From Bacillus Anthracis.
J. Biol. Chem. V. 287 16058 2012
PubMed-ID: 22408253 | Reference-DOI: 10.1074/JBC.M112.359349

Molecule 1 - PETROBACTIN BIOSYNTHESIS PROTEIN ASBB
	Chains	:	A, B
	Engineered	:	YES
	Expression System	:	ESCHERICHIA COLI
	Expression System Plasmid	:	PMCSG28
	Expression System Strain	:	BL21 MAGIC
	Expression System Taxid	:	469008
	Expression System Vector Type	:	PLASMID
	Gene	:	ASBB, BA_1982, GBAA_1982
	Organism Common	:	ANTHRAX,ANTHRAX BACTERIUM
	Organism Scientific	:	BACILLUS ANTHRACIS
	Organism Taxid	:	260799
	Strain	:	STERNE

		1	2
Asymmetric/Biological Unit	:	A	B

Summary Information (see also Sequences/Alignments below)

Asymmetric/Biological Unit (5, 33)

No.	Name	Count	Type	Full Name
1	ATP	1	Ligand/Ion	ADENOSINE-5'-TRIPHOSPHATE
2	CL	2	Ligand/Ion	CHLORIDE ION
3	EDO	3	Ligand/Ion	1,2-ETHANEDIOL
4	MG	1	Ligand/Ion	MAGNESIUM ION
5	MSE	26	Mod. Amino Acid	SELENOMETHIONINE

Asymmetric Unit (7, 7)

No.	Name	Evidence	Residues	Description
1	AC1	SOFTWARE	ASP A:148 , ASN A:152 , ALA A:277 , GLN A:278 , ARG A:285 , HOH A:718	BINDING SITE FOR RESIDUE CL A 617
2	AC2	SOFTWARE	HIS A:194 , LYS A:196 , ASP A:262	BINDING SITE FOR RESIDUE EDO A 618
3	AC3	SOFTWARE	GLY B:157 , HIS B:158 , SER B:280 , ARG B:282 , LYS B:296 , ARG B:308 , ASN B:385 , TYR B:388 , HIS B:436 , GLY B:437 , GLN B:438 , ASP B:456 , GLU B:459 , MG B:618 , HOH B:646 , HOH B:663 , HOH B:672 , HOH B:766 , HOH B:793	BINDING SITE FOR RESIDUE ATP B 617
4	AC4	SOFTWARE	HIS B:436 , GLN B:438 , ASN B:439 , ASP B:456 , ATP B:617	BINDING SITE FOR RESIDUE MG B 618
5	AC5	SOFTWARE	HIS B:194 , LYS B:196 , ASP B:262 , GLY B:264	BINDING SITE FOR RESIDUE EDO B 619
6	AC6	SOFTWARE	LYS B:528 , SER B:531	BINDING SITE FOR RESIDUE EDO B 620
7	AC7	SOFTWARE	ASN B:403	BINDING SITE FOR RESIDUE CL B 621

(no "SS Bond" information available for 3TO3)

(no "Cis Peptide Bond" information available for 3TO3)

(no "SAP(SNP)/Variant" information available for 3TO3)

(no "PROSITE Motif" information available for 3TO3)

(no "Exon" information available for 3TO3)

Asymmetric/Biological Unit

Reformat:	Number of residues per line = ('0' or empty: single-line sequence representation)
	Number of residues per labelling interval =
	UniProt sequence: complete aligned part

Show mapping:	SCOP domains	CATH domains	Pfam domains	Secondary structure (by author)
	SAPs(SNPs)	PROSITE motifs	Exons
	(details for a mapped element are shown in a popup box when the mouse pointer rests over it)

Chain A from PDB  Type:PROTEIN  Length:593
 aligned with Q81RQ8_BACAN | Q81RQ8 from UniProtKB/TrEMBL  Length:612

    Alignment length:600
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302       312       322       332       342       352       362       372       382       392       402       412       422       432       442       452       462       472       482       492       502       512       522       532       542       552       562       572       582       592       602
         Q81RQ8_BACAN     3 MDMYHTKILKAIESEDYISVRRRVLRQLVESLIYEGIITPARIEKEEQILFLIQGLDEDNKSVTYECYGRERITFGRISIDSLIVRVQDGKQEIQSVAQFLEEVFRVVNVEQTKLDSFIHELEQTIFKDTIAQYERCNKLKYTQKSYDELENHLIDGHPYHPSYKARIGFQYRDNFRYGYEFMRPIKLIWIAAHKKNATVGYENEVIYDKILKSEVGERKLEAYKERIHSMGCDPKQYLFIPVHPWQWENFIISNYAEDIQDKGIIYLGESADDYCAQQSMRTLRNVTNPKRPYVKVSLNILNTSTLRTLKPYSVASAPAISNWLSNVVSQDSYLRDESRVILLKEFSSVMYDTNKKATYGSLGCIWRESVHHYLGEQEDAVPFNGLYAKEKDGTPIIDAWLNKYGIENWLRLLIQKAIIPVIHLVVEHGIALESHGQNMILVHKEGLPVRIALKDFHEGLEFYRPFLKEMNKCPDFTKMHKTYANGKMNDFFEMDRIECLQEMVLDALFLFNVGELAFVLADKYEWKEESFWMIVVEEIENHFRKYPHLKDRFESIQLYTPTFYAEQLTKRRLYIDVESLVHEVPNPLYRARQLNIQKS 602
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.....eeee....eeeeeeee.....eeeeeeeeee......eee....eee...eee..hhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhhhhh.-------.hhhhhhhhh................hhhhhhhhhhhhh.....eeeeee...eee...hhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhh.eeeeeehhhhhhhhhhhhhhhhhhh..eeeeee....eee.....eeee.......eeee.eeeee..eee..hhhhhhhhhhhhhhhhhhhhhhhhhhhh...ee..eeeeeee...........eeeee...........eeee.hhhhh........hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhee...hhh.eeeeee..eeeeeee.hhhhhheee.hhh.......hhhhhhhhhhhh......ee..hhhhhhhhhh.....hhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh....eeeeehhhhhhhh......eeeeehhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 3to3 A   1 mDmYHTKILKAIESEDYISVRRRVLRQLVESLIYEGIITPARIEKEEQILFLIQGLDEDNKSVTYECYGRERITFGRISIDSLIVRVQDGKQEIQSVAQFLEEVFRVVNVEQTKLDSFIHELEQTIFKDTIAQYERC-------KSYDELENHLIDGHPYHPSYKARIGFQYRDNFRYGYEFmRPIKLIWIAAHKKNATVGYENEVIYDKILKSEVGERKLEAYKERIHSmGCDPKQYLFIPVHPWQWENFIISNYAEDIQDKGIIYLGESADDYCAQQSmRTLRNVTNPKRPYVKVSLNILNTSTLRTLKPYSVASAPAISNWLSNVVSQDSYLRDESRVILLKEFSSVmYDTNKKATYGSLGCIWRESVHHYLGEQEDAVPFNGLYAKEKDGTPIIDAWLNKYGIENWLRLLIQKAIIPVIHLVVEHGIALESHGQNmILVHKEGLPVRIALKDFHEGLEFYRPFLKEmNKCPDFTKmHKTYANGKmNDFFEmDRIECLQEmVLDALFLFNVGELAFVLADKYEWKEESFWmIVVEEIENHFRKYPHLKDRFESIQLYTPTFYAEQLTKRRLYIDVESLVHEVPNPLYRARQLNIQKS 600
                            | |     10        20        30        40        50        60        70        80        90       100       110       120       130      |  -    |  150       160       170       180  |    190       200       210       220       230|      240       250       260       270       280|      290       300       310       320       330       340       350|      360       370       380       390       400       410       420       430       440       450       460       470|      480       490    |  500   |   510       520       530   |   540       550       560       570       580       590       600
                            | |                                                                                                                                   137     145                                   183-MSE                                         231-MSE                                           281-MSE                                                               351-MSE                                                                                  440-MSE                        471-MSE  480-MSE  489-MSE |      504-MSE                       534-MSE                                                              
                            1-MSE                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       495-MSE                                                                                                     
                              3-MSE

Chain B from PDB  Type:PROTEIN  Length:595
 aligned with Q81RQ8_BACAN | Q81RQ8 from UniProtKB/TrEMBL  Length:612

    Alignment length:601
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391       401       411       421       431       441       451       461       471       481       491       501       511       521       531       541       551       561       571       581       591       601 
         Q81RQ8_BACAN     2 RMDMYHTKILKAIESEDYISVRRRVLRQLVESLIYEGIITPARIEKEEQILFLIQGLDEDNKSVTYECYGRERITFGRISIDSLIVRVQDGKQEIQSVAQFLEEVFRVVNVEQTKLDSFIHELEQTIFKDTIAQYERCNKLKYTQKSYDELENHLIDGHPYHPSYKARIGFQYRDNFRYGYEFMRPIKLIWIAAHKKNATVGYENEVIYDKILKSEVGERKLEAYKERIHSMGCDPKQYLFIPVHPWQWENFIISNYAEDIQDKGIIYLGESADDYCAQQSMRTLRNVTNPKRPYVKVSLNILNTSTLRTLKPYSVASAPAISNWLSNVVSQDSYLRDESRVILLKEFSSVMYDTNKKATYGSLGCIWRESVHHYLGEQEDAVPFNGLYAKEKDGTPIIDAWLNKYGIENWLRLLIQKAIIPVIHLVVEHGIALESHGQNMILVHKEGLPVRIALKDFHEGLEFYRPFLKEMNKCPDFTKMHKTYANGKMNDFFEMDRIECLQEMVLDALFLFNVGELAFVLADKYEWKEESFWMIVVEEIENHFRKYPHLKDRFESIQLYTPTFYAEQLTKRRLYIDVESLVHEVPNPLYRARQLNIQKS 602
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.....eeee....eeeeeeee.....eeeeeeeeee......eee....eee...eee..hhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhhhhh..------.hhhhhhhhh................hhhhhhhhhhhhh.....eeeeee...eee...hhhhhhhhhhhhhhhhhhhhhhhhhhh...hhh.eeeeeehhhhhhhhhhhhhhhhhhh..eeeeee....eee.....eeee.......eeee.eeeee..eee..hhhhhhhhhhhhhhhhhhhhhhhhhhh....ee..eeeeeee...........eeeee.hhhhh.....eeee.hhhhh........hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhee...hhh.eeeeee..eeeeeee.......eee.hhh.......hhhhhhhhhhh.......ee..hhhhhhhhhh.....hhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh....eeeee..hhhhh.......eeeeehhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3to3 B   0 AmDmYHTKILKAIESEDYISVRRRVLRQLVESLIYEGIITPARIEKEEQILFLIQGLDEDNKSVTYECYGRERITFGRISIDSLIVRVQDGKQEIQSVAQFLEEVFRVVNVEQTKLDSFIHELEQTIFKDTIAQYERCN------KSYDELENHLIDGHPYHPSYKARIGFQYRDNFRYGYEFmRPIKLIWIAAHKKNATVGYENEVIYDKILKSEVGERKLEAYKERIHSmGCDPKQYLFIPVHPWQWENFIISNYAEDIQDKGIIYLGESADDYCAQQSmRTLRNVTNPKRPYVKVSLNILNTSTLRTLKPYSVASAPAISNWLSNVVSQDSYLRDESRVILLKEFSSVmYDTNKKATYGSLGCIWRESVHHYLGEQEDAVPFNGLYAKEKDGTPIIDAWLNKYGIENWLRLLIQKAIIPVIHLVVEHGIALESHGQNmILVHKEGLPVRIALKDFHEGLEFYRPFLKEmNKCPDFTKmHKTYANGKmNDFFEmDRIECLQEmVLDALFLFNVGELAFVLADKYEWKEESFWmIVVEEIENHFRKYPHLKDRFESIQLYTPTFYAEQLTKRRLYIDVESLVHEVPNPLYRARQLNIQKS 600
                             | |     9        19        29        39        49        59        69        79        89        99       109       119       129        |-     | 149       159       169       179   |   189       199       209       219       229 |     239       249       259       269       279 |     289       299       309       319       329       339       349 |     359       369       379       389       399       409       419       429       439|      449       459       469 |     479|      489     | 499    |  509       519       529    |  539       549       559       569       579       589       599 
                             1-MSE                                                                                                                                  138    145                                   183-MSE                                         231-MSE                                           281-MSE                                                               351-MSE                                                                                  440-MSE                        471-MSE  480-MSE  489-MSE |      504-MSE                       534-MSE                                                              
                               3-MSE                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     495-MSE

Legend:		→ Mismatch	(orange background)
	-	→ Gap	(green background, '-', border residues have a numbering label)
		→ Modified Residue	(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
	x	→ Chemical Group	(purple background, 'x', labelled with number + name, e.g. ACE or NH2)
	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '\|'

(no "SCOP Domain" information available for 3TO3)

(no "CATH Domain" information available for 3TO3)

(no "Pfam Domain" information available for 3TO3)

Asymmetric/Biological Unit(hide GO term definitions)

Chain A,B (Q81RQ8_BACAN | Q81RQ8)

molecular function
	GO:0005524	ATP binding	Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
	GO:0046872	metal ion binding	Interacting selectively and non-covalently with any metal ion.
	GO:0000166	nucleotide binding	Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose.
	GO:0015343	siderophore transmembrane transporter activity	Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: siderophore-iron(out) + H+(out) = siderophore-iron(in) + H+(in).
biological process
	GO:0019290	siderophore biosynthetic process	The chemical reactions and pathways resulting in the formation of siderophores, low molecular weight Fe(III)-chelating substances made by aerobic or facultatively anaerobic bacteria, especially when growing under iron deficient conditions. The complexes of Fe(3+)-siderophores have very high stability constants and are taken up by specific transport systems by microorganisms; the subsequent release of iron requires enzymatic action.
	GO:0044718	siderophore transmembrane transport	The directed movement of siderophores, low molecular weight Fe(III)-chelating substances, from one side of a membrane to the other, by means of some agent such as a transporter or pore.
cellular component
	GO:0005623	cell	The basic structural and functional unit of all organisms. Includes the plasma membrane and any external encapsulating structures such as the cell wall and cell envelope.

Asymmetric/Biological Unit
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Description

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Ligands, Modified Residues, Ions (5, 33)

Sites (7, 7)

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