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(-) Description

Title :  GBAA_1210 PROTEIN, A PUTATIVE ADENYLATE CYCLASE, FROM BACILLUS ANTHRACIS IN COMPLEX WITH AMP
 
Authors :  J. Osipiuk, M. Gu, K. Kwon, W. F. Anderson, A. Joachimiak, Center For S Genomics Of Infectious Diseases (Csgid)
Date :  23 Aug 11  (Deposition) - 31 Aug 11  (Release) - 31 Aug 11  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.10
Chains :  Asym. Unit :  A,B,C,D
Biol. Unit 1:  A,B  (1x)
Biol. Unit 2:  C,D  (1x)
Keywords :  Structural Genomics, Adenosine Monophosphate, Center For Structural Genomics Of Infectious Diseases, Csgid, Cyth-Like Superfamily, Adenylate Cyclase, Lyase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  J. Osipiuk, M. Gu, K. Kwon, W. F. Anderson, A. Joachimiak
Gbaa_1210 Protein, A Putative Adenylate Cyclase, From Bacillus Anthracis In Complex With Amp
To Be Published
PubMed: search

(-) Compounds

Molecule 1 - GBAA_1210 PROTEIN
    Chains: A, B, C, D
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PMCSG7
    Expression System Strain: BL21(DE3)
    Expression System Taxid: 562
    Expression System Vector Type: PLASMID
    Gene: BAS1117, BA_1210, GBAA_1210
    Mutation: YES
    Organism Common: ANTHRAX,ANTHRAX BACTERIUM
    Organism Scientific: BACILLUS ANTHRACIS
    Organism Taxid: 261594
    Strain: AMES ANCESTOR

 Structural Features

(-) Chains, Units

  1234
Asymmetric Unit : ABCD
Biological Unit 1 (1x): AB  
Biological Unit 2 (1x):   CD

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (4, 38)

Asymmetric Unit (4, 38)
No.NameCountTypeFull Name
1ACT7Ligand/IonACETATE ION
2AMP4Ligand/IonADENOSINE MONOPHOSPHATE
3MSE24Mod. Amino AcidSELENOMETHIONINE
4SO43Ligand/IonSULFATE ION
Biological Unit 1 (4, 17)
No.NameCountTypeFull Name
1ACT2Ligand/IonACETATE ION
2AMP2Ligand/IonADENOSINE MONOPHOSPHATE
3MSE12Mod. Amino AcidSELENOMETHIONINE
4SO41Ligand/IonSULFATE ION
Biological Unit 2 (4, 21)
No.NameCountTypeFull Name
1ACT5Ligand/IonACETATE ION
2AMP2Ligand/IonADENOSINE MONOPHOSPHATE
3MSE12Mod. Amino AcidSELENOMETHIONINE
4SO42Ligand/IonSULFATE ION

(-) Sites  (14, 14)

Asymmetric Unit (14, 14)
No.NameEvidenceResiduesDescription
01AC1SOFTWAREHIS A:36 , HIS A:56 , TYR A:61 , LYS A:86 , GLU A:90 , TYR A:115 , HOH A:251 , ACT A:609 , AMP B:501BINDING SITE FOR RESIDUE AMP A 501
02AC2SOFTWAREHOH A:245 , AMP A:501 , ACT A:604 , HIS B:36 , HIS B:56 , TYR B:61 , LYS B:86 , GLU B:90 , TYR B:115 , HOH B:205 , HOH B:240 , HOH B:242 , GLU D:82BINDING SITE FOR RESIDUE AMP B 501
03AC3SOFTWAREHIS C:36 , HIS C:56 , TYR C:61 , MSE C:89 , GLU C:90 , TYR C:115 , HOH C:240 , AMP D:501 , ACT D:605BINDING SITE FOR RESIDUE AMP C 501
04AC4SOFTWAREGLU A:90 , GLU C:90 , AMP C:501 , ACT C:606 , HIS D:36 , HIS D:56 , TYR D:61 , LYS D:86 , MSE D:89 , GLU D:90 , TYR D:115 , HOH D:221BINDING SITE FOR RESIDUE AMP D 501
05AC5SOFTWAREASN C:142 , ACT C:610 , LYS D:10 , ARG D:53 , LYS D:66 , HOH D:220BINDING SITE FOR RESIDUE SO4 D 601
06AC6SOFTWAREGLN D:33 , ARG D:53 , ARG D:55 , LYS D:66 , ARG D:123 , HOH D:215 , HOH D:220 , HOH D:226BINDING SITE FOR RESIDUE SO4 D 602
07AC7SOFTWAREVAL A:34 , HIS A:36 , HIS A:56 , HOH A:245 , ACT A:609BINDING SITE FOR RESIDUE SO4 A 603
08AC8SOFTWARETYR A:115 , MSE A:116 , GLY A:117 , VAL B:34 , SER B:118 , AMP B:501BINDING SITE FOR RESIDUE ACT A 604
09AC9SOFTWAREHIS C:36 , SER C:118 , THR C:120 , AMP C:501 , TYR D:115 , MSE D:116 , GLY D:117BINDING SITE FOR RESIDUE ACT D 605
10BC1SOFTWARETYR C:115 , MSE C:116 , GLY C:117 , SER D:118 , THR D:120 , AMP D:501BINDING SITE FOR RESIDUE ACT C 606
11BC2SOFTWARETHR C:81 , ASN C:83BINDING SITE FOR RESIDUE ACT C 607
12BC3SOFTWAREGLU C:8 , ARG C:55 , LYS C:66 , ARG C:123BINDING SITE FOR RESIDUE ACT C 608
13BC4SOFTWARELYS A:32 , VAL A:34 , HIS A:56 , AMP A:501 , SO4 A:603BINDING SITE FOR RESIDUE ACT A 609
14BC5SOFTWAREASN C:142 , GLY D:49 , ARG D:53 , SO4 D:601BINDING SITE FOR RESIDUE ACT C 610

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 3TJ7)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 3TJ7)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 3TJ7)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 3TJ7)

(-) Exons   (0, 0)

(no "Exon" information available for 3TJ7)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:176
 aligned with Q81TQ6_BACAN | Q81TQ6 from UniProtKB/TrEMBL  Length:192

    Alignment length:176
                             1                                                                                                                                                                              
                             |       9        19        29        39        49        59        69        79        89        99       109       119       129       139       149       159       169      
         Q81TQ6_BACAN     - -MTQEIEIEFKNIVTEEEFHALCKSFSIEVFTKQVNHYFETPNFSLKEAGSALRIRHKGETYTLTLKQPAEVGLLETHQVVTENEAKMMMETNVIISGAVMNQLCKLQIPVSALTYMGSLTTERAETLFEGGTLVFDHSFYYNHDDYEIEFEVQDEETGKAAFIHLLKQHNIPIRH 175
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeeeeeeeeeehhhhhhhhhhhh.....eeeeeeeee...hhhhhh..eeeeeee..eeeeeeeee....eeeeeeeehhhhhhhhhhh.....hhhhhhhhhhh.hhhhheeeeeeeeeeeeeee..eeeeeeeee....eeeeeeeee.hhhhhhhhhhhhhhhh...... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3tj7 A   0 AmTQEIEIEFKNIVTEEEFHALCKSFSIEVFTKQVNHYFETPNSSLKEAGSALRIRHKGETYTLTLKQPAEVGLLETHQVVTENEAKmmmETNVIISGAVmNQLCKLQIPVSALTYmGSLTTERAETLFEGGTLVFDHSFYYNHDDYEIEFEVQDEETGKAAFIHLLKQHNIPIRH 175
                             |       9        19        29        39        49        59        69        79       |89        99|      109      |119       129       139       149       159       169      
                             |                                                                                    87-MSE      100-MSE         116-MSE                                                       
                             1-MSE                                                                                 88-MSE                                                                                   
                                                                                                                    89-MSE                                                                                  


Chain B from PDB  Type:PROTEIN  Length:176
 aligned with Q81TQ6_BACAN | Q81TQ6 from UniProtKB/TrEMBL  Length:192

    Alignment length:176
                             1                                                                                                                                                                              
                             |       9        19        29        39        49        59        69        79        89        99       109       119       129       139       149       159       169      
         Q81TQ6_BACAN     - -MTQEIEIEFKNIVTEEEFHALCKSFSIEVFTKQVNHYFETPNFSLKEAGSALRIRHKGETYTLTLKQPAEVGLLETHQVVTENEAKMMMETNVIISGAVMNQLCKLQIPVSALTYMGSLTTERAETLFEGGTLVFDHSFYYNHDDYEIEFEVQDEETGKAAFIHLLKQHNIPIRH 175
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeeeeeeeeeehhhhhhhhhhhhh....eeeeeeeee...hhhhhh..eeeeeee..eeeeeeeee....eeeeeeeehhhhhhhhhhhh....hhhhhhhhhhh.hhhhheeeeeeeeeeeeeee..eeeeeeeeee..eeeeeeeeee.hhhhhhhhhhhhhhhh...... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3tj7 B   0 AmTQEIEIEFKNIVTEEEFHALCKSFSIEVFTKQVNHYFETPNSSLKEAGSALRIRHKGETYTLTLKQPAEVGLLETHQVVTENEAKmmmETNVIISGAVmNQLCKLQIPVSALTYmGSLTTERAETLFEGGTLVFDHSFYYNHDDYEIEFEVQDEETGKAAFIHLLKQHNIPIRH 175
                             |       9        19        29        39        49        59        69        79       |89        99|      109      |119       129       139       149       159       169      
                             1-MSE                                                                                87-MSE      100-MSE         116-MSE                                                       
                                                                                                                   88-MSE                                                                                   
                                                                                                                    89-MSE                                                                                  


Chain C from PDB  Type:PROTEIN  Length:177
 aligned with Q81TQ6_BACAN | Q81TQ6 from UniProtKB/TrEMBL  Length:192

    Alignment length:177
                             1                                                                                                                                                                               
                             |       9        19        29        39        49        59        69        79        89        99       109       119       129       139       149       159       169       
         Q81TQ6_BACAN     - -MTQEIEIEFKNIVTEEEFHALCKSFSIEVFTKQVNHYFETPNFSLKEAGSALRIRHKGETYTLTLKQPAEVGLLETHQVVTENEAKMMMETNVIISGAVMNQLCKLQIPVSALTYMGSLTTERAETLFEGGTLVFDHSFYYNHDDYEIEFEVQDEETGKAAFIHLLKQHNIPIRHT 176
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeeeeeeeeeehhhhhhhhhhhhh....eeeeeeeee...hhhhhh..eeeeeee..eeeeeeeee....eeeeeeeehhhhhhhhhhhh....hhhhhhhhhhh.hhhhheeeeeeeeeeeeeee..eeeeeeeee....eeeeeeeee.hhhhhhhhhhhhhhhh....... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3tj7 C   0 AmTQEIEIEFKNIVTEEEFHALCKSFSIEVFTKQVNHYFETPNSSLKEAGSALRIRHKGETYTLTLKQPAEVGLLETHQVVTENEAKmmmETNVIISGAVmNQLCKLQIPVSALTYmGSLTTERAETLFEGGTLVFDHSFYYNHDDYEIEFEVQDEETGKAAFIHLLKQHNIPIRHT 176
                             |       9        19        29        39        49        59        69        79       |89        99|      109      |119       129       139       149       159       169       
                             1-MSE                                                                                87-MSE      100-MSE         116-MSE                                                        
                                                                                                                   88-MSE                                                                                    
                                                                                                                    89-MSE                                                                                   


Chain D from PDB  Type:PROTEIN  Length:176
 aligned with Q81TQ6_BACAN | Q81TQ6 from UniProtKB/TrEMBL  Length:192

    Alignment length:176
                              1                                                                                                                                                                             
                              |      8        18        28        38        48        58        68        78        88        98       108       118       128       138       148       158       168      
         Q81TQ6_BACAN     - --MTQEIEIEFKNIVTEEEFHALCKSFSIEVFTKQVNHYFETPNFSLKEAGSALRIRHKGETYTLTLKQPAEVGLLETHQVVTENEAKMMMETNVIISGAVMNQLCKLQIPVSALTYMGSLTTERAETLFEGGTLVFDHSFYYNHDDYEIEFEVQDEETGKAAFIHLLKQHNIPIR 174
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeeeeeeeeeeehhhhhhhhhhhhh....eeeeeeeee...hhhhhh..eeeeeee..eeeeeeeee....eeeeeeeehhhhhhhhhhhh....hhhhhhhhhh..hhhhheeeeeeeeeeeeeee..eeeeeeeee....eeeeeeeee.hhhhhhhhhhhhhhhh..... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3tj7 D  -1 NAmTQEIEIEFKNIVTEEEFHALCKSFSIEVFTKQVNHYFETPNSSLKEAGSALRIRHKGETYTLTLKQPAEVGLLETHQVVTENEAKmmmETNVIISGAVmNQLCKLQIPVSALTYmGSLTTERAETLFEGGTLVFDHSFYYNHDDYEIEFEVQDEETGKAAFIHLLKQHNIPIR 174
                              |      8        18        28        38        48        58        68        78        88|       98 |     108       118       128       138       148       158       168      
                              1-MSE                                                                                87-MSE      100-MSE         116-MSE                                                      
                                                                                                                    88-MSE                                                                                  
                                                                                                                     89-MSE
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  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 3TJ7)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 3TJ7)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 3TJ7)

(-) Gene Ontology  (4, 4)

Asymmetric Unit(hide GO term definitions)
Chain A,B,C,D   (Q81TQ6_BACAN | Q81TQ6)
molecular function
    GO:0003674    molecular_function    Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions.
    GO:0000166    nucleotide binding    Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose.
biological process
    GO:0008150    biological_process    Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
cellular component
    GO:0005575    cellular_component    The part of a cell, extracellular environment or virus in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together.

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

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        Q81TQ6_BACAN | Q81TQ6: 3sy3

(-) Related Entries Specified in the PDB File

3sy3 GBAA_1210 PROTEIN, APOPROTEIN RELATED ID: IDP02500 RELATED DB: TARGETDB