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(-) Description

Title :  C-TERMINAL DOMAIN OF GLUCOSAMINE-FRUCTOSE-6-PHOSPHATE AMINOTRANSFERASE FROM FRANCISELLA TULARENSIS.
 
Authors :  J. Osipiuk, M. Zhou, N. Maltseva, Y. Kim, L. Papazisi, W. F. Anderson, A. Joachimiak, Center For Structural Genomics Of Infectious D (Csgid)
Date :  05 Aug 11  (Deposition) - 24 Aug 11  (Release) - 24 Aug 11  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.28
Chains :  Asym. Unit :  A,B,C,D,E,F,G,H
Biol. Unit 1:  A,B  (1x)
Biol. Unit 2:  C,D  (1x)
Biol. Unit 3:  E,F  (1x)
Biol. Unit 4:  G,H  (1x)
Keywords :  Structural Genomics, Center For Structural Genomics Of Infectious Diseases, Csgid, Transferase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  J. Osipiuk, M. Zhou, N. Maltseva, Y. Kim, L. Papazisi, W. F. Anderson, A. Joachimiak, Center For Structural Genomics Of Infectious Diseases (Csgid)
C-Terminal Domain Of Glucosamine-Fructose-6-Phosphate Aminotransferase From Francisella Tularensis.
To Be Published
PubMed: search

(-) Compounds

Molecule 1 - GLUCOSAMINE--FRUCTOSE-6-PHOSPHATE AMINOTRANSFERASE [ISOMERIZING]
    Chains: A, B, C, D, E, F, G, H
    EC Number: 2.6.1.16
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PMCSG7
    Expression System Strain: BL21(DE3)
    Expression System Taxid: 469008
    Expression System Vector Type: PLASMID
    Fragment: C-TERMINAL DOMAIN RESIDUES 241-612
    Gene: FTT_0388, GLMS
    Organism Scientific: FRANCISELLA TULARENSIS SUBSP. TULARENSIS
    Organism Taxid: 119856
    Strain: SCHU S4
    Synonym: D-FRUCTOSE-6-PHOSPHATE AMIDOTRANSFERASE, GFAT, GLUCOSAMINE- 6-PHOSPHATE SYNTHASE, HEXOSEPHOSPHATE AMINOTRANSFERASE, L-GLUTAMINE- D-FRUCTOSE-6-PHOSPHATE AMIDOTRANSFERASE

 Structural Features

(-) Chains, Units

  12345678
Asymmetric Unit : ABCDEFGH
Biological Unit 1 (1x): AB      
Biological Unit 2 (1x):   CD    
Biological Unit 3 (1x):     EF  
Biological Unit 4 (1x):       GH

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 48)

Asymmetric Unit (1, 48)
No.NameCountTypeFull Name
1MSE48Mod. Amino AcidSELENOMETHIONINE
Biological Unit 1 (1, 12)
No.NameCountTypeFull Name
1MSE12Mod. Amino AcidSELENOMETHIONINE
Biological Unit 2 (1, 12)
No.NameCountTypeFull Name
1MSE12Mod. Amino AcidSELENOMETHIONINE
Biological Unit 3 (1, 12)
No.NameCountTypeFull Name
1MSE12Mod. Amino AcidSELENOMETHIONINE
Biological Unit 4 (1, 12)
No.NameCountTypeFull Name
1MSE12Mod. Amino AcidSELENOMETHIONINE

(-) Sites  (0, 0)

(no "Site" information available for 3TBF)

(-) SS Bonds  (3, 3)

Asymmetric Unit
No.Residues
1C:374 -C:376
2F:374 -F:376
3G:374 -G:376

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 3TBF)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 3TBF)

(-) PROSITE Motifs  (1, 16)

Asymmetric Unit (1, 16)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1SISPS51464 SIS domain profile.GLMS_FRATT287-427
 
 
 
 
 
 
 
460-602
 
 
 
 
 
 
 		  16A:287-427
B:287-427
C:287-427
D:287-427
E:287-427
F:287-427
G:287-427
H:287-427
A:460-602
B:460-602
C:460-602
D:460-601
E:460-602
F:460-602
G:460-602
H:460-602
Biological Unit 1 (1, 4)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1SISPS51464 SIS domain profile.GLMS_FRATT287-427
 
 
 
 
 
 
 
460-602
 
 
 
 
 
 
 		  4A:287-427
B:287-427
-
-
-
-
-
-
A:460-602
B:460-602
-
-
-
-
-
-
Biological Unit 2 (1, 4)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1SISPS51464 SIS domain profile.GLMS_FRATT287-427
 
 
 
 
 
 
 
460-602
 
 
 
 
 
 
 		  4-
-
C:287-427
D:287-427
-
-
-
-
-
-
C:460-602
D:460-601
-
-
-
-
Biological Unit 3 (1, 4)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1SISPS51464 SIS domain profile.GLMS_FRATT287-427
 
 
 
 
 
 
 
460-602
 
 
 
 
 
 
 		  4-
-
-
-
E:287-427
F:287-427
-
-
-
-
-
-
E:460-602
F:460-602
-
-
Biological Unit 4 (1, 4)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1SISPS51464 SIS domain profile.GLMS_FRATT287-427
 
 
 
 
 
 
 
460-602
 
 
 
 
 
 
 		  4-
-
-
-
-
-
G:287-427
H:287-427
-
-
-
-
-
-
G:460-602
H:460-602

(-) Exons   (0, 0)

(no "Exon" information available for 3TBF)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:357
 aligned with GLMS_FRATT | Q5NHQ9 from UniProtKB/Swiss-Prot  Length:612

    Alignment length:357
                                   255       265       275       285       295       305       315       325       335       345       355       365       375       385       395       405       415       425       435       445       455       465       475       485       495       505       515       525       535       545       555       565       575       585       595       
           GLMS_FRATT   246 SKDGYKHYMLKEIYEQPEAVSNTILASLADGEISLDSFDKRAKELFEKTKHICIVACGTSYNAGMTAKYWIEKYAKVPCSVEIASEIRYRDNVVVDGSLFVSISQSGETADTLESLRKSKKQNYVGSMCICNVPNSSLVRESDIAFMTKAGVEIGVASTKAFTTQLVALAIFTLVIAKLKNSLTDQQIAKYTEELKNIRALVMGALKLDTEIDQISEYFSDKEHTIFLGRGLYYPIAIEGALKLKEISYIHAEAYPSGELKHGPLALVDKNMPIVAVVPNDELLDKTLSNLQEVHARGGKLILFVDKAVKERVNFDNSIVLELDAGHDFSAPVVFTIPLQLLSYHVAIIKGTDVDQP 602
               SCOP domains d3tbfa_ A: automated matches                                                                                                                                                                                                                                                                                                                                          SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ......hhhhhhhhhhhhhhhhhhhh.ee..ee.hhhh..hhhhhhhh..eeeeeehhhhhhhhhhhhhhhhhh....eeeeehhhhh.........eeeeeee....hhhhhhhhhhhh...eeeeeeee....hhhhhhh.eeee...........hhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...eeeeee..hhhhhhhhhhhhhhhhhh.eeeeee.hhh............eeeeee....hhhhhhhhhhhhhhh..eeeeeee.hhhhhh.....eeeee.....hhhhhhhhhhhhhhhhhhhhhhh...... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -----------------------------------------SIS  PDB: A:287-427 UniProt: 287-427                                                                                                         --------------------------------SIS  PDB: A:460-602 UniProt: 460-602                                                                                                            PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3tbf A 246 SKDGYKHYmLKEIYEQPEAVSNTILASLADGEISLDSFDKRAKELFEKTKHICIVACGTSYNAGmTAKYWIEKYAKVPCSVEIASEIRYRDNVVVDGSLFVSISQSGETADTLESLRKSKKQNYVGSmCICNVPNSSLVRESDIAFmTKAGVEIGVASTKAFTTQLVALAIFTLVIAKLKNSLTDQQIAKYTEELKNIRALVmGALKLDTEIDQISEYFSDKEHTIFLGRGLYYPIAIEGALKLKEISYIHAEAYPSGELKHGPLALVDKNmPIVAVVPNDELLDKTLSNLQEVHARGGKLILFVDKAVKERVNFDNSIVLELDAGHDFSAPVVFTIPLQLLSYHVAIIKGTDVDQP 602
                                   255       265       275       285       295       305    |  315       325       335       345       355       365       375       385      |395       405       415       425       435       445  |    455       465       475       485       495       505       515 |     525       535       545       555       565       575       585       595       
                                  254-MSE                                                 310-MSE                                                        373-MSE            392-MSE                                                 448-MSE                                                              517-MSE                                                                                 


Chain B from PDB  Type:PROTEIN  Length:354
 aligned with GLMS_FRATT | Q5NHQ9 from UniProtKB/Swiss-Prot  Length:612

    Alignment length:358
                                   254       264       274       284       294       304       314       324       334       344       354       364       374       384       394       404       414       424       434       444       454       464       474       484       494       504       514       524       534       544       554       564       574       584       594        
           GLMS_FRATT   245 ASKDGYKHYMLKEIYEQPEAVSNTILASLADGEISLDSFDKRAKELFEKTKHICIVACGTSYNAGMTAKYWIEKYAKVPCSVEIASEIRYRDNVVVDGSLFVSISQSGETADTLESLRKSKKQNYVGSMCICNVPNSSLVRESDIAFMTKAGVEIGVASTKAFTTQLVALAIFTLVIAKLKNSLTDQQIAKYTEELKNIRALVMGALKLDTEIDQISEYFSDKEHTIFLGRGLYYPIAIEGALKLKEISYIHAEAYPSGELKHGPLALVDKNMPIVAVVPNDELLDKTLSNLQEVHARGGKLILFVDKAVKERVNFDNSIVLELDAGHDFSAPVVFTIPLQLLSYHVAIIKGTDVDQP 602
               SCOP domains d3tbfb_ B: automated matches                                                                                                                                                                                                                                                                                                                                           SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .......hhhhhhhhhhhhhhhhhhhh...........----.hhhhhhh.eeeeeehhhhhhhhhhhhhhhhhh....eeeeehhhhh.........eeeeeee....hhhhhhhhhhhhh....eeeeee....hhhhhhh.eeee...........hhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.eeeeee..hhhhhhhhhhhhhhhhhh.eeeeee.hhh..hhhhhh....eeeeee....hhhhhhhhhhhhhhh..eeeeeee.hhhhhh.....eeeee......hhhhhhhhhhhhhhhhhhhhh....... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------SIS  PDB: B:287-427 UniProt: 287-427                                                                                                         --------------------------------SIS  PDB: B:460-602 UniProt: 460-602                                                                                                            PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3tbf B 245 ASKDGYKHYmLKEIYEQPEAVSNTILASLADGEISLDS----AKELFEKTKHICIVACGTSYNAGmTAKYWIEKYAKVPCSVEIASEIRYRDNVVVDGSLFVSISQSGETADTLESLRKSKKQNYVGSmCICNVPNSSLVRESDIAFmTKAGVEIGVASTKAFTTQLVALAIFTLVIAKLKNSLTDQQIAKYTEELKNIRALVmGALKLDTEIDQISEYFSDKEHTIFLGRGLYYPIAIEGALKLKEISYIHAEAYPSGELKHGPLALVDKNmPIVAVVPNDELLDKTLSNLQEVHARGGKLILFVDKAVKERVNFDNSIVLELDAGHDFSAPVVFTIPLQLLSYHVAIIKGTDVDQP 602
                                   254       264       274       | -  |    294       304     | 314       324       334       344       354       364       374       384       394       404       414       424       434       444   |   454       464       474       484       494       504       514  |    524       534       544       554       564       574       584       594        
                                   254-MSE                     282  287                    310-MSE                                                        373-MSE            392-MSE                                                 448-MSE                                                              517-MSE                                                                                 


Chain C from PDB  Type:PROTEIN  Length:358
 aligned with GLMS_FRATT | Q5NHQ9 from UniProtKB/Swiss-Prot  Length:612

    Alignment length:358
                                   254       264       274       284       294       304       314       324       334       344       354       364       374       384       394       404       414       424       434       444       454       464       474       484       494       504       514       524       534       544       554       564       574       584       594        
           GLMS_FRATT   245 ASKDGYKHYMLKEIYEQPEAVSNTILASLADGEISLDSFDKRAKELFEKTKHICIVACGTSYNAGMTAKYWIEKYAKVPCSVEIASEIRYRDNVVVDGSLFVSISQSGETADTLESLRKSKKQNYVGSMCICNVPNSSLVRESDIAFMTKAGVEIGVASTKAFTTQLVALAIFTLVIAKLKNSLTDQQIAKYTEELKNIRALVMGALKLDTEIDQISEYFSDKEHTIFLGRGLYYPIAIEGALKLKEISYIHAEAYPSGELKHGPLALVDKNMPIVAVVPNDELLDKTLSNLQEVHARGGKLILFVDKAVKERVNFDNSIVLELDAGHDFSAPVVFTIPLQLLSYHVAIIKGTDVDQP 602
               SCOP domains d3tbfc_ C: automated matches                                                                                                                                                                                                                                                                                                                                           SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .......hhhhhhhhhhhhhhhhhhhh.ee..ee.hhhhhhhhhhhhhhh.eeeeeehhhhhhhhhhhhhhhhhh....eeeeehhhhh.........eeeeeee....hhhhhhhhhhhh...eeeeeeee....hhhhhhh.eeee...........hhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...eeeeee..hhhhhhhhhhhhhhhhhh.eeeeee.hhh..hhhhhh....eeeeee....hhhhhhhhhhhhhhh..eeeeeee.hhhhhh.....eeeee.....hhhhhhhhhhhhhhhhhhhhhh....... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------SIS  PDB: C:287-427 UniProt: 287-427                                                                                                         --------------------------------SIS  PDB: C:460-602 UniProt: 460-602                                                                                                            PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3tbf C 245 ASKDGYKHYmLKEIYEQPEAVSNTILASLADGEISLDSFDKRAKELFEKTKHICIVACGTSYNAGmTAKYWIEKYAKVPCSVEIASEIRYRDNVVVDGSLFVSISQSGETADTLESLRKSKKQNYVGSmCICNVPNSSLVRESDIAFmTKAGVEIGVASTKAFTTQLVALAIFTLVIAKLKNSLTDQQIAKYTEELKNIRALVmGALKLDTEIDQISEYFSDKEHTIFLGRGLYYPIAIEGALKLKEISYIHAEAYPSGELKHGPLALVDKNmPIVAVVPNDELLDKTLSNLQEVHARGGKLILFVDKAVKERVNFDNSIVLELDAGHDFSAPVVFTIPLQLLSYHVAIIKGTDVDQP 602
                                   254       264       274       284       294       304     | 314       324       334       344       354       364       374       384       394       404       414       424       434       444   |   454       464       474       484       494       504       514  |    524       534       544       554       564       574       584       594        
                                   254-MSE                                                 310-MSE                                                        373-MSE            392-MSE                                                 448-MSE                                                              517-MSE                                                                                 


Chain D from PDB  Type:PROTEIN  Length:357
 aligned with GLMS_FRATT | Q5NHQ9 from UniProtKB/Swiss-Prot  Length:612

    Alignment length:357
                                   254       264       274       284       294       304       314       324       334       344       354       364       374       384       394       404       414       424       434       444       454       464       474       484       494       504       514       524       534       544       554       564       574       584       594       
           GLMS_FRATT   245 ASKDGYKHYMLKEIYEQPEAVSNTILASLADGEISLDSFDKRAKELFEKTKHICIVACGTSYNAGMTAKYWIEKYAKVPCSVEIASEIRYRDNVVVDGSLFVSISQSGETADTLESLRKSKKQNYVGSMCICNVPNSSLVRESDIAFMTKAGVEIGVASTKAFTTQLVALAIFTLVIAKLKNSLTDQQIAKYTEELKNIRALVMGALKLDTEIDQISEYFSDKEHTIFLGRGLYYPIAIEGALKLKEISYIHAEAYPSGELKHGPLALVDKNMPIVAVVPNDELLDKTLSNLQEVHARGGKLILFVDKAVKERVNFDNSIVLELDAGHDFSAPVVFTIPLQLLSYHVAIIKGTDVDQ 601
               SCOP domains d3tbfd_ D: automated matches                                                                                                                                                                                                                                                                                                                                          SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .......hhhhhhhhhhhhhhhhhhhh.ee..ee.hhhhhhhhhhhhhh..eeeeeehhhhhhhhhhhhhhhhhhh...eeeeehhhhh.........eeeeeee....hhhhhhhhhhhh...eeeeeeee....hhhhhhh.eeee...........hhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...eeeeee..hhhhhhhhhhhhhhhhhh.eeeeee.hhh..hhhhhh....eeeeee....hhhhhhhhhhhhhhh..eeeeeee.hhhhhh.....eeeee.....hhhhhhhhhhhhhhhhhhhhhh...... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------SIS  PDB: D:287-427 UniProt: 287-427                                                                                                         --------------------------------SIS  PDB: D:460-601 UniProt: 460-602                                                                                                           PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3tbf D 245 ASKDGYKHYmLKEIYEQPEAVSNTILASLADGEISLDSFDKRAKELFEKTKHICIVACGTSYNAGmTAKYWIEKYAKVPCSVEIASEIRYRDNVVVDGSLFVSISQSGETADTLESLRKSKKQNYVGSmCICNVPNSSLVRESDIAFmTKAGVEIGVASTKAFTTQLVALAIFTLVIAKLKNSLTDQQIAKYTEELKNIRALVmGALKLDTEIDQISEYFSDKEHTIFLGRGLYYPIAIEGALKLKEISYIHAEAYPSGELKHGPLALVDKNmPIVAVVPNDELLDKTLSNLQEVHARGGKLILFVDKAVKERVNFDNSIVLELDAGHDFSAPVVFTIPLQLLSYHVAIIKGTDVDQ 601
                                   254       264       274       284       294       304     | 314       324       334       344       354       364       374       384       394       404       414       424       434       444   |   454       464       474       484       494       504       514  |    524       534       544       554       564       574       584       594       
                                   254-MSE                                                 310-MSE                                                        373-MSE            392-MSE                                                 448-MSE                                                              517-MSE                                                                                


Chain E from PDB  Type:PROTEIN  Length:358
 aligned with GLMS_FRATT | Q5NHQ9 from UniProtKB/Swiss-Prot  Length:612

    Alignment length:358
                                   254       264       274       284       294       304       314       324       334       344       354       364       374       384       394       404       414       424       434       444       454       464       474       484       494       504       514       524       534       544       554       564       574       584       594        
           GLMS_FRATT   245 ASKDGYKHYMLKEIYEQPEAVSNTILASLADGEISLDSFDKRAKELFEKTKHICIVACGTSYNAGMTAKYWIEKYAKVPCSVEIASEIRYRDNVVVDGSLFVSISQSGETADTLESLRKSKKQNYVGSMCICNVPNSSLVRESDIAFMTKAGVEIGVASTKAFTTQLVALAIFTLVIAKLKNSLTDQQIAKYTEELKNIRALVMGALKLDTEIDQISEYFSDKEHTIFLGRGLYYPIAIEGALKLKEISYIHAEAYPSGELKHGPLALVDKNMPIVAVVPNDELLDKTLSNLQEVHARGGKLILFVDKAVKERVNFDNSIVLELDAGHDFSAPVVFTIPLQLLSYHVAIIKGTDVDQP 602
               SCOP domains d3tbfe_ E: automated matches                                                                                                                                                                                                                                                                                                                                           SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .......hhhhhhhhhhhhhhhhhhhh.......hhhhhhhhhhhhhhhh.eeeeeehhhhhhhhhhhhhhhhhh....eeeeehhhhh.........eeeeeee....hhhhhhhhhhhh...eeeeeeee....hhhhhhh.eeee...........hhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...eeeeeehhhhhhhhhhhhhhhhhhhh.eeeeee.hhh...hhhhh....eeeeee....hhhhhhhhhhhhhhh..eeeeeee.hhhhhh.....eeeee.....hhhhhhhhhhhhhhhhhhhhhhh...... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------SIS  PDB: E:287-427 UniProt: 287-427                                                                                                         --------------------------------SIS  PDB: E:460-602 UniProt: 460-602                                                                                                            PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3tbf E 245 ASKDGYKHYmLKEIYEQPEAVSNTILASLADGEISLDSFDKRAKELFEKTKHICIVACGTSYNAGmTAKYWIEKYAKVPCSVEIASEIRYRDNVVVDGSLFVSISQSGETADTLESLRKSKKQNYVGSmCICNVPNSSLVRESDIAFmTKAGVEIGVASTKAFTTQLVALAIFTLVIAKLKNSLTDQQIAKYTEELKNIRALVmGALKLDTEIDQISEYFSDKEHTIFLGRGLYYPIAIEGALKLKEISYIHAEAYPSGELKHGPLALVDKNmPIVAVVPNDELLDKTLSNLQEVHARGGKLILFVDKAVKERVNFDNSIVLELDAGHDFSAPVVFTIPLQLLSYHVAIIKGTDVDQP 602
                                   254       264       274       284       294       304     | 314       324       334       344       354       364       374       384       394       404       414       424       434       444   |   454       464       474       484       494       504       514  |    524       534       544       554       564       574       584       594        
                                   254-MSE                                                 310-MSE                                                        373-MSE            392-MSE                                                 448-MSE                                                              517-MSE                                                                                 


Chain F from PDB  Type:PROTEIN  Length:358
 aligned with GLMS_FRATT | Q5NHQ9 from UniProtKB/Swiss-Prot  Length:612

    Alignment length:358
                                   254       264       274       284       294       304       314       324       334       344       354       364       374       384       394       404       414       424       434       444       454       464       474       484       494       504       514       524       534       544       554       564       574       584       594        
           GLMS_FRATT   245 ASKDGYKHYMLKEIYEQPEAVSNTILASLADGEISLDSFDKRAKELFEKTKHICIVACGTSYNAGMTAKYWIEKYAKVPCSVEIASEIRYRDNVVVDGSLFVSISQSGETADTLESLRKSKKQNYVGSMCICNVPNSSLVRESDIAFMTKAGVEIGVASTKAFTTQLVALAIFTLVIAKLKNSLTDQQIAKYTEELKNIRALVMGALKLDTEIDQISEYFSDKEHTIFLGRGLYYPIAIEGALKLKEISYIHAEAYPSGELKHGPLALVDKNMPIVAVVPNDELLDKTLSNLQEVHARGGKLILFVDKAVKERVNFDNSIVLELDAGHDFSAPVVFTIPLQLLSYHVAIIKGTDVDQP 602
               SCOP domains d3tbff_ F: automated matches                                                                                                                                                                                                                                                                                                                                           SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .......hhhhhhhhhhhhhhhhhhhh.ee..ee.hhhhhhhhhhhhhhh.eeeeee.hhhhhhhhhhhhhhhhh....eeeeehhhhh.........eeeeeee....hhhhhhhhhhhhh..eeeeeeee....hhhhhhh.eeee...........hhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.eeeeee..hhhhhhhhhhhhhhhhhh.eeeeee.hhhhhhhhhhh....eeeeee....hhhhhhhhhhhhhhh..eeeeeee.hhhhhh.....eeeee.....hhhhhhhhhhhhhhhhhhhhhhh...... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------SIS  PDB: F:287-427 UniProt: 287-427                                                                                                         --------------------------------SIS  PDB: F:460-602 UniProt: 460-602                                                                                                            PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3tbf F 245 ASKDGYKHYmLKEIYEQPEAVSNTILASLADGEISLDSFDKRAKELFEKTKHICIVACGTSYNAGmTAKYWIEKYAKVPCSVEIASEIRYRDNVVVDGSLFVSISQSGETADTLESLRKSKKQNYVGSmCICNVPNSSLVRESDIAFmTKAGVEIGVASTKAFTTQLVALAIFTLVIAKLKNSLTDQQIAKYTEELKNIRALVmGALKLDTEIDQISEYFSDKEHTIFLGRGLYYPIAIEGALKLKEISYIHAEAYPSGELKHGPLALVDKNmPIVAVVPNDELLDKTLSNLQEVHARGGKLILFVDKAVKERVNFDNSIVLELDAGHDFSAPVVFTIPLQLLSYHVAIIKGTDVDQP 602
                                   254       264       274       284       294       304     | 314       324       334       344       354       364       374       384       394       404       414       424       434       444   |   454       464       474       484       494       504       514  |    524       534       544       554       564       574       584       594        
                                   254-MSE                                                 310-MSE                                                        373-MSE            392-MSE                                                 448-MSE                                                              517-MSE                                                                                 


Chain G from PDB  Type:PROTEIN  Length:357
 aligned with GLMS_FRATT | Q5NHQ9 from UniProtKB/Swiss-Prot  Length:612

    Alignment length:357
                                   255       265       275       285       295       305       315       325       335       345       355       365       375       385       395       405       415       425       435       445       455       465       475       485       495       505       515       525       535       545       555       565       575       585       595       
           GLMS_FRATT   246 SKDGYKHYMLKEIYEQPEAVSNTILASLADGEISLDSFDKRAKELFEKTKHICIVACGTSYNAGMTAKYWIEKYAKVPCSVEIASEIRYRDNVVVDGSLFVSISQSGETADTLESLRKSKKQNYVGSMCICNVPNSSLVRESDIAFMTKAGVEIGVASTKAFTTQLVALAIFTLVIAKLKNSLTDQQIAKYTEELKNIRALVMGALKLDTEIDQISEYFSDKEHTIFLGRGLYYPIAIEGALKLKEISYIHAEAYPSGELKHGPLALVDKNMPIVAVVPNDELLDKTLSNLQEVHARGGKLILFVDKAVKERVNFDNSIVLELDAGHDFSAPVVFTIPLQLLSYHVAIIKGTDVDQP 602
               SCOP domains d3tbfg_ G: automated matches                                                                                                                                                                                                                                                                                                                                          SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ......hhhhhhhhhhhhhhhhhhhh.......hhhhh..hhhhhhhh..eeeeeehhhhhhhhhhhhhhhhhh....eeeeehhhhh.........eeeeeee....hhhhhhhhhhhh...eeeeeeee....hhhhhh..eeee...........hhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...eeeeee..hhhhhhhhhhhhhhhhhh.eeeeee.hhh..hhhhhh....eeeeee....hhhhhhhhhhhhhhh..eeeeeee.hhhhhh.....eeeee.....hhhhhhhhhhhhhhhhhhhhhhh...... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -----------------------------------------SIS  PDB: G:287-427 UniProt: 287-427                                                                                                         --------------------------------SIS  PDB: G:460-602 UniProt: 460-602                                                                                                            PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3tbf G 246 SKDGYKHYmLKEIYEQPEAVSNTILASLADGEISLDSFDKRAKELFEKTKHICIVACGTSYNAGmTAKYWIEKYAKVPCSVEIASEIRYRDNVVVDGSLFVSISQSGETADTLESLRKSKKQNYVGSmCICNVPNSSLVRESDIAFmTKAGVEIGVASTKAFTTQLVALAIFTLVIAKLKNSLTDQQIAKYTEELKNIRALVmGALKLDTEIDQISEYFSDKEHTIFLGRGLYYPIAIEGALKLKEISYIHAEAYPSGELKHGPLALVDKNmPIVAVVPNDELLDKTLSNLQEVHARGGKLILFVDKAVKERVNFDNSIVLELDAGHDFSAPVVFTIPLQLLSYHVAIIKGTDVDQP 602
                                   255       265       275       285       295       305    |  315       325       335       345       355       365       375       385      |395       405       415       425       435       445  |    455       465       475       485       495       505       515 |     525       535       545       555       565       575       585       595       
                                  254-MSE                                                 310-MSE                                                        373-MSE            392-MSE                                                 448-MSE                                                              517-MSE                                                                                 


Chain H from PDB  Type:PROTEIN  Length:357
 aligned with GLMS_FRATT | Q5NHQ9 from UniProtKB/Swiss-Prot  Length:612

    Alignment length:359
                                   253       263       273       283       293       303       313       323       333       343       353       363       373       383       393       403       413       423       433       443       453       463       473       483       493       503       513       523       533       543       553       563       573       583       593         
           GLMS_FRATT   244 SASKDGYKHYMLKEIYEQPEAVSNTILASLADGEISLDSFDKRAKELFEKTKHICIVACGTSYNAGMTAKYWIEKYAKVPCSVEIASEIRYRDNVVVDGSLFVSISQSGETADTLESLRKSKKQNYVGSMCICNVPNSSLVRESDIAFMTKAGVEIGVASTKAFTTQLVALAIFTLVIAKLKNSLTDQQIAKYTEELKNIRALVMGALKLDTEIDQISEYFSDKEHTIFLGRGLYYPIAIEGALKLKEISYIHAEAYPSGELKHGPLALVDKNMPIVAVVPNDELLDKTLSNLQEVHARGGKLILFVDKAVKERVNFDNSIVLELDAGHDFSAPVVFTIPLQLLSYHVAIIKGTDVDQP 602
               SCOP domains d3tbfh_ H: automated matches                                                                                                                                                                                                                                                                                                                                            SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ........hhhhhhhhhhhhhhhhhhhh..........--.hhhhhhhhhh.eeeeeehhhhhhhhhhhhhhhhhh....eeeeehhhhh.........eeeeeee....hhhhhhhhhhhhh..eeeeeeee....hhhhhhh.eeee...........hhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...eeeeee..hhhhhhhhhhhhhhhhh..eeeeee......hhhhh.....eeeeee....hhhhhhhhhhhhhh...eeeeeee.hhhhhh.....eeeee.....hhhhhhhhhhhhhhhhhhhhhh....... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------SIS  PDB: H:287-427 UniProt: 287-427                                                                                                         --------------------------------SIS  PDB: H:460-602 UniProt: 460-602                                                                                                            PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3tbf H 244 SASKDGYKHYmLKEIYEQPEAVSNTILASLADGEISLD--DKRAKELFEKTKHICIVACGTSYNAGmTAKYWIEKYAKVPCSVEIASEIRYRDNVVVDGSLFVSISQSGETADTLESLRKSKKQNYVGSmCICNVPNSSLVRESDIAFmTKAGVEIGVASTKAFTTQLVALAIFTLVIAKLKNSLTDQQIAKYTEELKNIRALVmGALKLDTEIDQISEYFSDKEHTIFLGRGLYYPIAIEGALKLKEISYIHAEAYPSGELKHGPLALVDKNmPIVAVVPNDELLDKTLSNLQEVHARGGKLILFVDKAVKERVNFDNSIVLELDAGHDFSAPVVFTIPLQLLSYHVAIIKGTDVDQP 602
                                   253|      263       273       | -|      293       303      |313       323       333       343       353       363       373       383       393       403       413       423       433       443    |  453       463       473       483       493       503       513   |   523       533       543       553       563       573       583       593         
                                    254-MSE                    281  |                       310-MSE                                                        373-MSE            392-MSE                                                 448-MSE                                                              517-MSE                                                                                 
                                                                  284
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (1, 8)

Asymmetric Unit
(-)
Class: Alpha and beta proteins (a/b) (23833)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 3TBF)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 3TBF)

(-) Gene Ontology  (8, 8)

Asymmetric Unit(hide GO term definitions)
Chain A,B,C,D,E,F,G,H   (GLMS_FRATT | Q5NHQ9)
molecular function
    GO:0030246    carbohydrate binding    Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates.
    GO:0004360    glutamine-fructose-6-phosphate transaminase (isomerizing) activity    Catalysis of the reaction: beta-D-fructose 6-phosphate + L-glutamine = D-glucosamine 6-phosphate + L-glutamate.
    GO:0008483    transaminase activity    Catalysis of the transfer of an amino group to an acceptor, usually a 2-oxo acid.
    GO:0016740    transferase activity    Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2.
biological process
    GO:1901137    carbohydrate derivative biosynthetic process    The chemical reactions and pathways resulting in the formation of carbohydrate derivative.
    GO:0005975    carbohydrate metabolic process    The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule.
    GO:0006541    glutamine metabolic process    The chemical reactions and pathways involving glutamine, 2-amino-4-carbamoylbutanoic acid.
cellular component
    GO:0005737    cytoplasm    All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.

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