Show PDB file:   
         Plain Text   HTML   (compressed file size)
QuickSearch:   
by PDB,NDB,UniProt,PROSITE Code or Search Term(s)  
(-)Asym./Biol. Unit
(-)Asym./Biol. Unit - sites
collapse expand < >
Image Asym./Biol. Unit
Asym./Biol. Unit  (Jmol Viewer)
Image Asym./Biol. Unit - sites
Asym./Biol. Unit - sites  (Jmol Viewer)

(-) Description

Title :  SMALL LACCASE FROM STREPTOMYCES VIRIDOSPORUS T7A
 
Authors :  T. Lukk, S. Majumdar, J. A. Gerlt, S. K. Nair
Date :  04 Aug 11  (Deposition) - 29 Aug 12  (Release) - 01 Oct 14  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.30
Chains :  Asym./Biol. Unit :  A,B,C
Keywords :  Two-Domain Laccase, Oxidoreductase, Secreted (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  S. Majumdar, T. Lukk, J. O. Solbiati, S. Bauer, S. K. Nair, J. E. Cronan, J. A. Gerlt
Roles Of Small Laccases From Streptomyces In Lignin Degradation.
Biochemistry V. 53 4047 2014
PubMed-ID: 24870309  |  Reference-DOI: 10.1021/BI500285T

(-) Compounds

Molecule 1 - SMALL LACCASE, MULTI-COPPER OXIDASE
    Chains: A, B, C
    EC Number: 1.10.3.2
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PET-17B
    Expression System Strain: BL21 (DE3)
    Expression System Taxid: 469008
    Expression System Vector Type: PET
    Organism Scientific: STREPTOMYCES VIRIDOSPORUS
    Organism Taxid: 67581
    Strain: T7A

 Structural Features

(-) Chains, Units

  123
Asymmetric/Biological Unit : ABC

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (6, 39)

Asymmetric/Biological Unit (6, 39)
No.NameCountTypeFull Name
1ACT6Ligand/IonACETATE ION
2CU15Ligand/IonCOPPER (II) ION
3OXY3Ligand/IonOXYGEN MOLECULE
4PG45Ligand/IonTETRAETHYLENE GLYCOL
5SO47Ligand/IonSULFATE ION
6ZN3Ligand/IonZINC ION

(-) Sites  (39, 39)

Asymmetric Unit (39, 39)
No.NameEvidenceResiduesDescription
01AC1SOFTWAREHIS A:226 , CYS A:283 , HIS A:288 , MET A:293BINDING SITE FOR RESIDUE CU A 5
02AC2SOFTWAREHIS A:229 , HIS A:231 , OXY A:344 , HIS B:97 , HIS B:99 , HOH B:413BINDING SITE FOR RESIDUE CU A 7
03AC3SOFTWAREHIS A:231 , HIS A:282 , OXY A:344 , ACT A:347 , HIS B:153BINDING SITE FOR RESIDUE CU A 8
04AC4SOFTWAREHIS A:97 , HIS A:99 , OXY C:3 , HIS C:229 , HIS C:231BINDING SITE FOR RESIDUE CU A 11
05AC5SOFTWAREHIS A:99 , HIS A:151 , OXY C:3 , HIS C:284BINDING SITE FOR RESIDUE CU A 12
06AC6SOFTWAREHIS A:314 , ACT A:348 , ARG B:52 , ASP B:91BINDING SITE FOR RESIDUE CU A 13
07AC7SOFTWAREGLU A:158 , HIS A:159 , HIS C:315 , HOH C:455 , HOH C:680BINDING SITE FOR RESIDUE ZN A 2
08AC8SOFTWARECU A:7 , CU A:8 , HIS A:229 , HIS A:231 , HIS A:284 , ACT A:347 , CU B:6 , HIS B:97 , HIS B:99 , HIS B:151 , HIS B:153BINDING SITE FOR RESIDUE OXY A 344
09AC9SOFTWAREMET A:193 , PRO A:199 , ALA A:200 , ASN B:166 , HOH B:394BINDING SITE FOR RESIDUE PG4 A 4
10BC1SOFTWAREARG A:165 , ASN A:166 , HOH A:617 , MET B:193 , PRO B:199 , ALA B:200BINDING SITE FOR RESIDUE PG4 A 345
11BC2SOFTWAREGLY A:156 , THR A:161 , GLY A:162 , ARG A:165 , HIS B:201 , ASP B:290 , MET B:291 , HIS B:316 , HOH B:418BINDING SITE FOR RESIDUE SO4 A 3
12BC3SOFTWAREARG A:135 , THR A:139 , TRP A:140 , HOH A:364 , HOH A:469 , ARG C:213 , MET C:242BINDING SITE FOR RESIDUE SO4 A 346
13BC4SOFTWARECU A:8 , HIS A:282 , HIS A:284 , GLN A:286 , SER A:289 , OXY A:344 , HIS B:153 , HIS B:159BINDING SITE FOR RESIDUE ACT A 347
14BC5SOFTWARECU A:13 , ARG B:52 , ASP B:91 , HOH B:567BINDING SITE FOR RESIDUE ACT A 348
15BC6SOFTWAREHIS B:229 , HIS B:231 , HIS C:97 , HIS C:99 , OXY C:345BINDING SITE FOR RESIDUE CU B 2
16BC7SOFTWAREHIS B:231 , HIS B:282 , ACT B:348 , HIS C:153 , OXY C:345BINDING SITE FOR RESIDUE CU B 3
17BC8SOFTWAREHIS B:226 , CYS B:283 , HIS B:288 , MET B:293BINDING SITE FOR RESIDUE CU B 4
18BC9SOFTWAREHIS A:284 , OXY A:344 , HIS B:99 , HIS B:151BINDING SITE FOR RESIDUE CU B 6
19CC1SOFTWAREARG A:52 , ASP A:91 , HIS B:314 , ACT B:349BINDING SITE FOR RESIDUE CU B 15
20CC2SOFTWAREHIS A:315 , HOH A:420 , HOH A:635 , GLU B:158 , HIS B:159BINDING SITE FOR RESIDUE ZN B 344
21CC3SOFTWAREGLU A:223 , TYR A:224 , MET B:291 , TYR C:224 , SER C:287 , MET C:291 , HOH C:652BINDING SITE FOR RESIDUE PG4 B 345
22CC4SOFTWAREVAL B:131 , ARG B:141BINDING SITE FOR RESIDUE PG4 B 346
23CC5SOFTWAREHIS A:201 , ASP A:290 , MET A:291 , HIS A:316 , HOH A:470 , HOH A:495 , GLY B:162 , ARG B:165BINDING SITE FOR RESIDUE SO4 B 1
24CC6SOFTWAREHOH A:438 , HIS B:312 , ARG B:313 , HIS B:314BINDING SITE FOR RESIDUE SO4 B 347
25CC7SOFTWAREARG B:114BINDING SITE FOR RESIDUE SO4 B 7
26CC8SOFTWARECU B:3 , HIS B:282 , GLN B:286 , SER B:289 , HIS C:153 , HIS C:159 , OXY C:345BINDING SITE FOR RESIDUE ACT B 348
27CC9SOFTWAREARG A:52 , ASP A:91 , CU B:15 , HOH B:405BINDING SITE FOR RESIDUE ACT B 349
28DC1SOFTWAREHIS B:284 , HIS C:99 , HIS C:151 , OXY C:345BINDING SITE FOR RESIDUE CU C 1
29DC2SOFTWAREHIS C:226 , CYS C:283 , HIS C:288 , MET C:293BINDING SITE FOR RESIDUE CU C 9
30DC3SOFTWAREHIS A:153 , OXY C:3 , HIS C:231 , HIS C:282 , ACT C:347BINDING SITE FOR RESIDUE CU C 10
31DC4SOFTWAREACT C:4 , ARG C:52 , ASP C:91 , HIS C:314BINDING SITE FOR RESIDUE CU C 14
32DC5SOFTWAREHIS B:315 , HOH B:436 , GLU C:158 , HIS C:159BINDING SITE FOR RESIDUE ZN C 344
33DC6SOFTWARECU B:2 , CU B:3 , HIS B:229 , HIS B:231 , HIS B:282 , HIS B:284 , ACT B:348 , CU C:1 , HIS C:97 , HIS C:151 , HIS C:153BINDING SITE FOR RESIDUE OXY C 345
34DC7SOFTWARECU A:11 , CU A:12 , HIS A:97 , HIS A:151 , HIS A:153 , CU C:10 , HIS C:229 , HIS C:231 , HIS C:282 , HIS C:284 , ACT C:347BINDING SITE FOR RESIDUE OXY C 3
35DC8SOFTWAREGLY A:40 , GLY A:41 , VAL C:131 , ARG C:141 , HOH C:434BINDING SITE FOR RESIDUE PG4 C 346
36DC9SOFTWAREHOH B:482 , GLY C:156 , GLY C:162 , ARG C:165 , HIS C:201 , ASP C:290 , MET C:291 , HIS C:316 , HOH C:428BINDING SITE FOR RESIDUE SO4 C 2
37EC1SOFTWAREARG B:213 , MET B:242 , GLN B:267 , ARG C:135 , THR C:139 , TRP C:140 , HOH C:418BINDING SITE FOR RESIDUE SO4 C 5
38EC2SOFTWAREHIS A:153 , HIS A:159 , OXY C:3 , CU C:10 , HIS C:282 , HIS C:284 , GLN C:286 , SER C:289BINDING SITE FOR RESIDUE ACT C 347
39EC3SOFTWARECU C:14 , ARG C:52 , ASP C:91 , HOH C:576BINDING SITE FOR RESIDUE ACT C 4

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 3TAS)

(-) Cis Peptide Bonds  (6, 6)

Asymmetric/Biological Unit
No.Residues
1Ile A:69 -Pro A:70
2Gly A:203 -Pro A:204
3Ile B:69 -Pro B:70
4Gly B:203 -Pro B:204
5Ile C:69 -Pro C:70
6Gly C:203 -Pro C:204

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 3TAS)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 3TAS)

(-) Exons   (0, 0)

(no "Exon" information available for 3TAS)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:300
 aligned with J9PBR2_STRVD | J9PBR2 from UniProtKB/TrEMBL  Length:313

    Alignment length:300
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302
         J9PBR2_STRVD     3 PAKTAPAGGEVKRIKLYAERLGGGQMGYGLEKGKATIPGPLIELNEGDTLHIEFENTMDVPVSLHVHGLDYEISSDGTKQSRSDVEPGGTRTYTWRTHVPGRRADGTWRAGSAGYWHYHDHVVGTEHGTGGIRNGLYGPVIVRRKGDVLPDRTHTIVFNDMTINNRPAHTGPDFEATVGDRVEFVMITHGEYYHTFHLHGHRWADNRTGMLTGPDDPSQVIDNKICGPADSFGFQVIAGEGVGAGAWMYHCHVQSHSDMGMVGLFLVKKPDGTIPGYDPHRHHHGAASGKPEKAEKPAGS 302
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ..........eeeeeeeeee.hhh.eeee............eeee...eeeeeeee........ee.....hhhhh.............eeeeee.....ee.....ee....eeeeee........hhhhhhhh.eeeeeee........eeeeeeee..ee..........eeee...eeeeeeeee....eeeee....ee...............ee.eeee....eeeeeee.......eeeeeee.hhhhhhh..eeeeeee................................ Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 3tas A  33 PAKTAPAGGEVKRIKLYAERLGGGQMGYGLEKGKATIPGPLIELNEGDTLHIEFENTMDVPVSLHVHGLDYEISSDGTKQSRSDVEPGGTRTYTWRTHVPGRRADGTWRAGSAGYWHYHDHVVGTEHGTGGIRNGLYGPVIVRRKGDVLPDRTHTIVFNDMTINNRPAHTGPDFEATVGDRVEFVMITHGEYYHTFHLHGHRWADNRTGMLTGPDDPSQVIDNKICGPADSFGFQVIAGEGVGAGAWMYHCHVQSHSDMGMVGLFLVKKPDGTIPGYDPHRHHHGAASGKPEKAEKPAGS 332
                                    42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302       312       322       332


Chain B from PDB  Type:PROTEIN  Length:301
 aligned with J9PBR2_STRVD | J9PBR2 from UniProtKB/TrEMBL  Length:313

    Alignment length:301
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300 
         J9PBR2_STRVD     1 MGPAKTAPAGGEVKRIKLYAERLGGGQMGYGLEKGKATIPGPLIELNEGDTLHIEFENTMDVPVSLHVHGLDYEISSDGTKQSRSDVEPGGTRTYTWRTHVPGRRADGTWRAGSAGYWHYHDHVVGTEHGTGGIRNGLYGPVIVRRKGDVLPDRTHTIVFNDMTINNRPAHTGPDFEATVGDRVEFVMITHGEYYHTFHLHGHRWADNRTGMLTGPDDPSQVIDNKICGPADSFGFQVIAGEGVGAGAWMYHCHVQSHSDMGMVGLFLVKKPDGTIPGYDPHRHHHGAASGKPEKAEKPAG 301
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ............eeeeeeeeee.hhh.eeee............eeee...eeeeeeee........ee.....hhhhh.............eeeeee.....ee.....ee....eeeeee........hhhhhhhh.eeeeeee........eeeeeeee..ee..........eeee...eeeeeeeee....eeeee....ee...............ee.eeee....eeeeeee.......eeeeeee.hhhhhhh..eeeeeee............................... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3tas B  31 MGPAKTAPAGGEVKRIKLYAERLGGGQMGYGLEKGKATIPGPLIELNEGDTLHIEFENTMDVPVSLHVHGLDYEISSDGTKQSRSDVEPGGTRTYTWRTHVPGRRADGTWRAGSAGYWHYHDHVVGTEHGTGGIRNGLYGPVIVRRKGDVLPDRTHTIVFNDMTINNRPAHTGPDFEATVGDRVEFVMITHGEYYHTFHLHGHRWADNRTGMLTGPDDPSQVIDNKICGPADSFGFQVIAGEGVGAGAWMYHCHVQSHSDMGMVGLFLVKKPDGTIPGYDPHRHHHGAASGKPEKAEKPAG 331
                                    40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330 


Chain C from PDB  Type:PROTEIN  Length:300
 aligned with J9PBR2_STRVD | J9PBR2 from UniProtKB/TrEMBL  Length:313

    Alignment length:300
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302
         J9PBR2_STRVD     3 PAKTAPAGGEVKRIKLYAERLGGGQMGYGLEKGKATIPGPLIELNEGDTLHIEFENTMDVPVSLHVHGLDYEISSDGTKQSRSDVEPGGTRTYTWRTHVPGRRADGTWRAGSAGYWHYHDHVVGTEHGTGGIRNGLYGPVIVRRKGDVLPDRTHTIVFNDMTINNRPAHTGPDFEATVGDRVEFVMITHGEYYHTFHLHGHRWADNRTGMLTGPDDPSQVIDNKICGPADSFGFQVIAGEGVGAGAWMYHCHVQSHSDMGMVGLFLVKKPDGTIPGYDPHRHHHGAASGKPEKAEKPAGS 302
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ..........eeeeeeeeee.hhh.eeee............eeee...eeeeeeee........ee.....hhhhh.............eeeeeee....ee.....ee....eeeeee........hhhhhhhh.eeeeeee........eeeeeeee..ee..........eeee...eeeeeeeee....eeeee....ee...............ee.eeee....eeeeeee.......eeeeeee.hhhhhhh..eeeeeee................................ Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 3tas C  33 PAKTAPAGGEVKRIKLYAERLGGGQMGYGLEKGKATIPGPLIELNEGDTLHIEFENTMDVPVSLHVHGLDYEISSDGTKQSRSDVEPGGTRTYTWRTHVPGRRADGTWRAGSAGYWHYHDHVVGTEHGTGGIRNGLYGPVIVRRKGDVLPDRTHTIVFNDMTINNRPAHTGPDFEATVGDRVEFVMITHGEYYHTFHLHGHRWADNRTGMLTGPDDPSQVIDNKICGPADSFGFQVIAGEGVGAGAWMYHCHVQSHSDMGMVGLFLVKKPDGTIPGYDPHRHHHGAASGKPEKAEKPAGS 332
                                    42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302       312       322       332
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 3TAS)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 3TAS)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 3TAS)

(-) Gene Ontology  (5, 5)

Asymmetric/Biological Unit(hide GO term definitions)
Chain A,B,C   (J9PBR2_STRVD | J9PBR2)
molecular function
    GO:0005507    copper ion binding    Interacting selectively and non-covalently with copper (Cu) ions.
    GO:0052716    hydroquinone:oxygen oxidoreductase activity    Catalysis of the reaction: 4 hydroquinone + O2 = 4 benzosemiquinone + 4 H2O.
    GO:0046872    metal ion binding    Interacting selectively and non-covalently with any metal ion.
    GO:0016491    oxidoreductase activity    Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
biological process
    GO:0055114    oxidation-reduction process    A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.

 Visualization

(-) Interactive Views

Asymmetric/Biological Unit
  Complete Structure
    Jena3D(integrated viewing of ligand, site, SAP, PROSITE, SCOP information)
    WebMol | AstexViewer[tm]@PDBe
(Java Applets, require no local installation except for Java; loading may be slow)
    STRAP
(Java WebStart application, automatic local installation, requires Java; full application with system access!)
    RasMol
(require local installation)
    Molscript (VRML)
(requires installation of a VRML viewer; select preferred view via VRML and generate a mono or stereo PDF format file)
 
  Ligands, Modified Residues, Ions
    ACT  [ RasMol | Jena3D ]  +environment [ RasMol | Jena3D ]
    CU  [ RasMol | Jena3D ]  +environment [ RasMol | Jena3D ]
    OXY  [ RasMol | Jena3D ]  +environment [ RasMol | Jena3D ]
    PG4  [ RasMol | Jena3D ]  +environment [ RasMol | Jena3D ]
    SO4  [ RasMol | Jena3D ]  +environment [ RasMol | Jena3D ]
    ZN  [ RasMol | Jena3D ]  +environment [ RasMol | Jena3D ]
 
  Sites
    AC1  [ RasMol ]  +environment [ RasMol ]
    AC2  [ RasMol ]  +environment [ RasMol ]
    AC3  [ RasMol ]  +environment [ RasMol ]
    AC4  [ RasMol ]  +environment [ RasMol ]
    AC5  [ RasMol ]  +environment [ RasMol ]
    AC6  [ RasMol ]  +environment [ RasMol ]
    AC7  [ RasMol ]  +environment [ RasMol ]
    AC8  [ RasMol ]  +environment [ RasMol ]
    AC9  [ RasMol ]  +environment [ RasMol ]
    BC1  [ RasMol ]  +environment [ RasMol ]
    BC2  [ RasMol ]  +environment [ RasMol ]
    BC3  [ RasMol ]  +environment [ RasMol ]
    BC4  [ RasMol ]  +environment [ RasMol ]
    BC5  [ RasMol ]  +environment [ RasMol ]
    BC6  [ RasMol ]  +environment [ RasMol ]
    BC7  [ RasMol ]  +environment [ RasMol ]
    BC8  [ RasMol ]  +environment [ RasMol ]
    BC9  [ RasMol ]  +environment [ RasMol ]
    CC1  [ RasMol ]  +environment [ RasMol ]
    CC2  [ RasMol ]  +environment [ RasMol ]
    CC3  [ RasMol ]  +environment [ RasMol ]
    CC4  [ RasMol ]  +environment [ RasMol ]
    CC5  [ RasMol ]  +environment [ RasMol ]
    CC6  [ RasMol ]  +environment [ RasMol ]
    CC7  [ RasMol ]  +environment [ RasMol ]
    CC8  [ RasMol ]  +environment [ RasMol ]
    CC9  [ RasMol ]  +environment [ RasMol ]
    DC1  [ RasMol ]  +environment [ RasMol ]
    DC2  [ RasMol ]  +environment [ RasMol ]
    DC3  [ RasMol ]  +environment [ RasMol ]
    DC4  [ RasMol ]  +environment [ RasMol ]
    DC5  [ RasMol ]  +environment [ RasMol ]
    DC6  [ RasMol ]  +environment [ RasMol ]
    DC7  [ RasMol ]  +environment [ RasMol ]
    DC8  [ RasMol ]  +environment [ RasMol ]
    DC9  [ RasMol ]  +environment [ RasMol ]
    EC1  [ RasMol ]  +environment [ RasMol ]
    EC2  [ RasMol ]  +environment [ RasMol ]
    EC3  [ RasMol ]  +environment [ RasMol ]
 
  Cis Peptide Bonds
    Gly A:203 - Pro A:204   [ RasMol ]  
    Gly B:203 - Pro B:204   [ RasMol ]  
    Gly C:203 - Pro C:204   [ RasMol ]  
    Ile A:69 - Pro A:70   [ RasMol ]  
    Ile B:69 - Pro B:70   [ RasMol ]  
    Ile C:69 - Pro C:70   [ RasMol ]  
 

(-) Still Images

Jmol
  protein: cartoon or spacefill or dots and stick; nucleic acid: cartoon and stick; ligands: spacefill; active site: stick
[ Asym./Biol. Unit PNG format | Asym./Biol. Unit - sites PNG format ](automatic orientation, automatically generated)
Molscript
  protein, nucleic acid: cartoon; ligands: spacefill; active site: ball and stick
[ mono PDF format | stereo PDF format ](default orientation, automatically generated)

 Databases and Analysis Tools

(-) Databases

Access by PDB/NDB ID
  3tas
    Family and Domain Information: ProDom | SYSTERS
    General Structural Information: GlycoscienceDB | MMDB | NDB | OCA | PDB | PDBe | PDBj | PDBsum | PDBWiki | PQS | PROTEOPEDIA
    Orientation in Membranes: OPM
    Protein Surface: SURFACE
    Secondary Structure: DSSP (structure derived) | HSSP (homology derived)
    Structural Genomics: GeneCensus
    Structural Neighbours: CE | VAST
    Structure Classification: CATH | Dali | SCOP
    Validation and Original Data: BMRB Data View | BMRB Restraints Grid | EDS | PROCHECK | RECOORD | WHAT_CHECK
 
Access by UniProt ID/Accession number
  J9PBR2_STRVD | J9PBR2
    Comparative Protein Structure Models: ModBase
    Genomic Information: Ensembl
    Protein-protein Interaction: DIP
    Sequence, Family and Domain Information: InterPro | Pfam | SMART | UniProtKB/TrEMBL
 
Access by Enzyme Classificator   (EC Number)
  1.10.3.2
    General Enzyme Information: BRENDA | EC-PDB | Enzyme | IntEnz
    Pathway: KEGG | MetaCyc
 
Access by Disease Identifier   (MIM ID)
  (no 'MIM ID' available)
    Disease Information: OMIM
 
Access by GenAge ID
  (no 'GenAge ID' available)
    Age Related Information: GenAge

(-) Analysis Tools

Access by PDB/NDB ID
    Domain Information: XDom
    Interatomic Contacts of Structural Units: CSU
    Ligand-protein Contacts: LPC
    Protein Cavities: castP
    Sequence and Secondary Structure: PDBCartoon
    Structure Alignment: STRAP(Java WebStart application, automatic local installation, requires Java; full application with system access!)
    Structure and Sequence Browser: STING
 
Access by UniProt ID/Accession number
  J9PBR2_STRVD | J9PBR2
    Protein Disorder Prediction: DisEMBL | FoldIndex | GLOBPLOT (for more information see DisProt)

 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/TrEMBL
        J9PBR2_STRVD | J9PBR2: 3tbb 3tbc

(-) Related Entries Specified in the PDB File

(no "Related Entries Specified in the PDB File" available for 3TAS)