Chain A from PDB Type:PROTEIN Length:93
aligned with NPM2_HUMAN | Q86SE8 from UniProtKB/Swiss-Prot Length:214
Alignment length:105
25 35 45 55 65 75 85 95 105 115
NPM2_HUMAN 16 TVLWGCELSQERRTWTFRPQLEGKQSCRLLLHTICLGEKAKEEMHRVEILPPANQEDKKMQPVTIASLQASVLPMVSMVGVQLSPPVTFQLRAGSGPVFLSGQER 120
SCOP domains d3t30a_ A: automate d matches SCOP domains
CATH domains --------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains --------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .eeeeeee.....eeee..-------.eeeeeeeee........eeeeee....-----...eeeeee......eeeeeeeee...eeeeeee....eeeeeeee Sec.struct. author
SAPs(SNPs) --------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE --------------------------------------------------------------------------------------------------------- PROSITE
Transcript --------------------------------------------------------------------------------------------------------- Transcript
3t30 A 16 TVLWGCELSQERRTWTFRP-------CRLLLHTICLGEKAKEEMHRVEILPPAN-----MQPVTIASLQASVLPMVSMVGVQLSPPVTFQLRAGSGPVFLSGQER 120
25 |- | 45 55 65 | 75 85 95 105 115
34 42 69 75
Chain B from PDB Type:PROTEIN Length:92
aligned with NPM2_HUMAN | Q86SE8 from UniProtKB/Swiss-Prot Length:214
Alignment length:107
24 34 44 54 64 74 84 94 104 114
NPM2_HUMAN 15 TTVLWGCELSQERRTWTFRPQLEGKQSCRLLLHTICLGEKAKEEMHRVEILPPANQEDKKMQPVTIASLQASVLPMVSMVGVQLSPPVTFQLRAGSGPVFLSGQERY 121
SCOP domains d3t30b_ B: automate d matches SCOP domains
CATH domains ----------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains ----------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .eeeeeeee.....eeee.-------..eeeeeeeee........eeeeee..--------..eeeeee......eeeeeeeee...eeeeeee....eeeeeeee. Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ----------------------------------------------------------------------------------------------------------- PROSITE
Transcript ----------------------------------------------------------------------------------------------------------- Transcript
3t30 B 15 TTVLWGCELSQERRTWTFR-------SCRLLLHTICLGEKAKEEMHRVEILPP--------QPVTIASLQASVLPMVSMVGVQLSPPVTFQLRAGSGPVFLSGQERY 121
24 |- | 44 54 64 | - | 84 94 104 114
33 41 67 76
Chain C from PDB Type:PROTEIN Length:95
aligned with NPM2_HUMAN | Q86SE8 from UniProtKB/Swiss-Prot Length:214
Alignment length:107
24 34 44 54 64 74 84 94 104 114
NPM2_HUMAN 15 TTVLWGCELSQERRTWTFRPQLEGKQSCRLLLHTICLGEKAKEEMHRVEILPPANQEDKKMQPVTIASLQASVLPMVSMVGVQLSPPVTFQLRAGSGPVFLSGQERY 121
SCOP domains d3t30c_ C: automated matches SCOP domains
CATH domains ----------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains ----------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .eeeeeeee.....eeee..-----...eeeeeeeee........eeeeee..-------...eeeeee......eeeeeeeee...eeeeeee....eeeeeeee. Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ----------------------------------------------------------------------------------------------------------- PROSITE
Transcript ----------------------------------------------------------------------------------------------------------- Transcript
3t30 C 15 TTVLWGCELSQERRTWTFRP-----QSCRLLLHTICLGEKAKEEMHRVEILPP-------MQPVTIASLQASVLPMVSMVGVQLSPPVTFQLRAGSGPVFLSGQERY 121
24 34 | 44 54 64 | -| 84 94 104 114
34 40 67 75
Chain D from PDB Type:PROTEIN Length:90
aligned with NPM2_HUMAN | Q86SE8 from UniProtKB/Swiss-Prot Length:214
Alignment length:107
24 34 44 54 64 74 84 94 104 114
NPM2_HUMAN 15 TTVLWGCELSQERRTWTFRPQLEGKQSCRLLLHTICLGEKAKEEMHRVEILPPANQEDKKMQPVTIASLQASVLPMVSMVGVQLSPPVTFQLRAGSGPVFLSGQERY 121
SCOP domains d3t30d_ D: automated matches SCOP domains
CATH domains ----------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains ----------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .eeeeeeee.....eeee..-------.eeeeeeeee........eeeeee.----------.eeeeee......eeeeeeeee...eeeeeee....eeeeeeee. Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ----------------------------------------------------------------------------------------------------------- PROSITE
Transcript ----------------------------------------------------------------------------------------------------------- Transcript
3t30 D 15 TTVLWGCELSQERRTWTFRP-------CRLLLHTICLGEKAKEEMHRVEILP----------PVTIASLQASVLPMVSMVGVQLSPPVTFQLRAGSGPVFLSGQERY 121
24 34 |44 54 64 | - | 84 94 104 114
34 42 66 77
Chain E from PDB Type:PROTEIN Length:92
aligned with NPM2_HUMAN | Q86SE8 from UniProtKB/Swiss-Prot Length:214
Alignment length:104
26 36 46 56 66 76 86 96 106 116
NPM2_HUMAN 17 VLWGCELSQERRTWTFRPQLEGKQSCRLLLHTICLGEKAKEEMHRVEILPPANQEDKKMQPVTIASLQASVLPMVSMVGVQLSPPVTFQLRAGSGPVFLSGQER 120
SCOP domains d3t30e_ E: automat ed matches SCOP domains
CATH domains -------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains -------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .eeeeee.....eeee..-----....eeeeeeee........eeeeee...-------..eeeeee......eeeeeeeee...eeeeeee....eeeeeee. Sec.struct. author
SAPs(SNPs) -------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE -------------------------------------------------------------------------------------------------------- PROSITE
Transcript -------------------------------------------------------------------------------------------------------- Transcript
3t30 E 17 VLWGCELSQERRTWTFRP-----QSCRLLLHTICLGEKAKEEMHRVEILPPA-------QPVTIASLQASVLPMVSMVGVQLSPPVTFQLRAGSGPVFLSGQER 120
26 | - | 46 56 66 | 76 86 96 106 116
34 40 68 76
Chain F from PDB Type:PROTEIN Length:91
aligned with NPM2_HUMAN | Q86SE8 from UniProtKB/Swiss-Prot Length:214
Alignment length:105
25 35 45 55 65 75 85 95 105 115
NPM2_HUMAN 16 TVLWGCELSQERRTWTFRPQLEGKQSCRLLLHTICLGEKAKEEMHRVEILPPANQEDKKMQPVTIASLQASVLPMVSMVGVQLSPPVTFQLRAGSGPVFLSGQER 120
SCOP domains d3t30f_ F: automated matches SCOP domains
CATH domains --------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains --------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .eeeeeee.....eeee...------.eeeeeeeee........eeeeee..--------..eeeeee......eeeeeeeee...eeeeeee....eeeeeeee Sec.struct. author
SAPs(SNPs) --------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE --------------------------------------------------------------------------------------------------------- PROSITE
Transcript --------------------------------------------------------------------------------------------------------- Transcript
3t30 F 16 TVLWGCELSQERRTWTFRPQ------CRLLLHTICLGEKAKEEMHRVEILPP--------QPVTIASLQASVLPMVSMVGVQLSPPVTFQLRAGSGPVFLSGQER 120
25 35 | 45 55 65 | -| 85 95 105 115
35 42 67 76
Chain G from PDB Type:PROTEIN Length:94
aligned with NPM2_HUMAN | Q86SE8 from UniProtKB/Swiss-Prot Length:214
Alignment length:106
24 34 44 54 64 74 84 94 104 114
NPM2_HUMAN 15 TTVLWGCELSQERRTWTFRPQLEGKQSCRLLLHTICLGEKAKEEMHRVEILPPANQEDKKMQPVTIASLQASVLPMVSMVGVQLSPPVTFQLRAGSGPVFLSGQER 120
SCOP domains d3t30g_ G: automated matches SCOP domains
CATH domains ---------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains ---------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ..eeeeeee.....eeee...------.eeeeeeeee........eeeee....------...eeeeee......eeeeeeeee...eeeeeee....eeeeeeee Sec.struct. author
SAPs(SNPs) ---------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ---------------------------------------------------------------------------------------------------------- PROSITE
Transcript ---------------------------------------------------------------------------------------------------------- Transcript
3t30 G 15 TTVLWGCELSQERRTWTFRPQ------CRLLLHTICLGEKAKEEMHRVEILPPA------MQPVTIASLQASVLPMVSMVGVQLSPPVTFQLRAGSGPVFLSGQER 120
24 34| |44 54 64 | -| 84 94 104 114
35 42 68 75
Chain H from PDB Type:PROTEIN Length:93
aligned with NPM2_HUMAN | Q86SE8 from UniProtKB/Swiss-Prot Length:214
Alignment length:107
24 34 44 54 64 74 84 94 104 114
NPM2_HUMAN 15 TTVLWGCELSQERRTWTFRPQLEGKQSCRLLLHTICLGEKAKEEMHRVEILPPANQEDKKMQPVTIASLQASVLPMVSMVGVQLSPPVTFQLRAGSGPVFLSGQERY 121
SCOP domains d3t30h_ H: automated matches SCOP domains
CATH domains ----------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains ----------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .eeeeeeee.....eeee..------..eeeeeeeee........eeeeee..--------..eeeeee......eeeeeeeee...eeeeeee....eeeeeeee. Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ----------------------------------------------------------------------------------------------------------- PROSITE
Transcript ----------------------------------------------------------------------------------------------------------- Transcript
3t30 H 15 TTVLWGCELSQERRTWTFRP------SCRLLLHTICLGEKAKEEMHRVEILPP--------QPVTIASLQASVLPMVSMVGVQLSPPVTFQLRAGSGPVFLSGQERY 121
24 34 | 44 54 64 | - | 84 94 104 114
34 41 67 76
Chain I from PDB Type:PROTEIN Length:92
aligned with NPM2_HUMAN | Q86SE8 from UniProtKB/Swiss-Prot Length:214
Alignment length:107
24 34 44 54 64 74 84 94 104 114
NPM2_HUMAN 15 TTVLWGCELSQERRTWTFRPQLEGKQSCRLLLHTICLGEKAKEEMHRVEILPPANQEDKKMQPVTIASLQASVLPMVSMVGVQLSPPVTFQLRAGSGPVFLSGQERY 121
SCOP domains d3t30i_ I: automated matches SCOP domains
CATH domains ----------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains ----------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .eeeeeeee.....eeee..------..eeeeeeeee........eeeeee..---------.eeeeee......eeeeeeeee...eeeeeee....eeeeeeee. Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ----------------------------------------------------------------------------------------------------------- PROSITE
Transcript ----------------------------------------------------------------------------------------------------------- Transcript
3t30 I 15 TTVLWGCELSQERRTWTFRP------SCRLLLHTICLGEKAKEEMHRVEILPP---------PVTIASLQASVLPMVSMVGVQLSPPVTFQLRAGSGPVFLSGQERY 121
24 34 | 44 54 64 | - | 84 94 104 114
34 41 67 77
Chain J from PDB Type:PROTEIN Length:90
aligned with NPM2_HUMAN | Q86SE8 from UniProtKB/Swiss-Prot Length:214
Alignment length:106
24 34 44 54 64 74 84 94 104 114
NPM2_HUMAN 15 TTVLWGCELSQERRTWTFRPQLEGKQSCRLLLHTICLGEKAKEEMHRVEILPPANQEDKKMQPVTIASLQASVLPMVSMVGVQLSPPVTFQLRAGSGPVFLSGQER 120
SCOP domains d3t30j_ J: automat ed matches SCOP domains
CATH domains ---------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains ---------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ..eeeeeeehhhh.eeee---------.eeeeeeeee........eeeeee...-------..eeeeee......eeeeeeeee...eeeeeee....eeeeeeee Sec.struct. author
SAPs(SNPs) ---------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ---------------------------------------------------------------------------------------------------------- PROSITE
Transcript ---------------------------------------------------------------------------------------------------------- Transcript
3t30 J 15 TTVLWGCELSQERRTWTF---------CRLLLHTICLGEKAKEEMHRVEILPPA-------QPVTIASLQASVLPMVSMVGVQLSPPVTFQLRAGSGPVFLSGQER 120
24 | - |44 54 64 | - | 84 94 104 114
32 42 68 76
Legend: |
|
→ Mismatch |
(orange background) |
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- |
→ Gap |
(green background, '-', border residues have a numbering label) |
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→ Modified Residue |
(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name) |
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x |
→ Chemical Group |
(purple background, 'x', labelled with number + name, e.g. ACE or NH2) |
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extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|' |