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(-)Asym./Biol. Unit
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(-) Description

Title :  STRUCTURE OF GREEN-TYPE RUBISCO ACTIVASE FROM TOBACCO
 
Authors :  M. Stotz, P. Wendler, O. Mueller-Cajar, F. U. Hartl, A. Bracher, M. Haye
Date :  21 Jul 11  (Deposition) - 09 Nov 11  (Release) - 30 Jul 14  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.95
Chains :  Asym./Biol. Unit :  A
Keywords :  Photosynthesis, Rubisco Activase, Aaa+ Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  M. Stotz, O. Mueller-Cajar, S. Ciniawsky, P. Wendler, F. U. Hartl, A. Bracher, M. Hayer-Hartl
Structure Of Green-Type Rubisco Activase From Tobacco.
Nat. Struct. Mol. Biol. V. 18 1366 2011
PubMed-ID: 22056769  |  Reference-DOI: 10.1038/NSMB.2171

(-) Compounds

Molecule 1 - RIBULOSE BISPHOSPHATE CARBOXYLASE/OXYGENASE ACTIVASE 1, CHLOROPLASTIC
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PHUE
    Expression System Strain: BL21(DE3)
    Expression System Taxid: 469008
    Expression System Vector Type: PLASMID
    Gene: RCA1
    Organism Common: AMERICAN TOBACCO,TOBACCO
    Organism Scientific: NICOTIANA TABACUM
    Organism Taxid: 4097
    Synonym: RA 1, RUBISCO ACTIVASE 1

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit : A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 3T15)

(-) Sites  (0, 0)

(no "Site" information available for 3T15)

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 3T15)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 3T15)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 3T15)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 3T15)

(-) Exons   (0, 0)

(no "Exon" information available for 3T15)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
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SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:263
 aligned with RCA1_TOBAC | Q40460 from UniProtKB/Swiss-Prot  Length:442

    Alignment length:293
                                   136       146       156       166       176       186       196       206       216       226       236       246       256       266       276       286       296       306       316       326       336       346       356       366       376       386       396       406       416   
           RCA1_TOBAC   127 NLDNKLDGFYIAPAFMDKLVVHITKNFLKLPNIKVPLILGIWGGKGQGKSFQCELVFRKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAEIIRKGNMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKQENARVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCTGIFRTDNVPAEDVVKIVDNFPGQSIDFFGALRARVYDDEVRKWVSGTGIEKIGDKLLNSFDGPPTFEQPKMTIEKLLEYGNMLVQEQENVKRVQLADK 419
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....ee..ee.hhhhhhhhhhhhhhh...........eeeeee....hhhhhhhhhhhhh....eeeehhhhhh---hhhhhhhhhhhhhhhhhhh......eeee...--------------hhhhhhhhhhhhhhh..-----------......eeee......--hhhhhhhheeeeee..hhhhhhhhhhhhhhhhh.hhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhh....hhhhhh..............hhhhhhhhhhhhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3t15 A  68 NLDNKLDGFYIAPAFMDKLVVHITKNFLKLPNIKVPLILGIWGGKGQGKSFQCELVFRKMGINPIMMSAGELES---GEPAKLIRQRYREAAEIIRKGNMCCLFINDLD--------------NNQMVNATLMNIADNPT-----------ENARVPIIVTGNDFST--APLIRDGRMEKFYWAPTREDRIGVCTGIFRTDNVPAEDVVKIVDNFPGQSIDFFGALRARVYDDEVRKWVSGTGIEKIGDKLLNSFDGPPTFEQPKMTIEKLLEYGNMLVQEQENVKRVQLADK 360
                                    77        87        97       107       117       127       137   |   147       157       167        |-         -   |   197       207         - |     227      |237       247       257       267       277       287       297       307       317       327       337       347       357   
                                                                                                   141 145                            176            191             207         219            234  |                                                                                                                           
                                                                                                                                                                                                   237
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 3T15)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 3T15)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 3T15)

(-) Gene Ontology  (5, 5)

Asymmetric/Biological Unit(hide GO term definitions)
Chain A   (RCA1_TOBAC | Q40460)
molecular function
    GO:0005524    ATP binding    Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
    GO:0000166    nucleotide binding    Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose.
cellular component
    GO:0009507    chloroplast    A chlorophyll-containing plastid with thylakoids organized into grana and frets, or stroma thylakoids, and embedded in a stroma.
    GO:0009570    chloroplast stroma    The space enclosed by the double membrane of a chloroplast but excluding the thylakoid space. It contains DNA, ribosomes and some temporary products of photosynthesis.
    GO:0009536    plastid    Any member of a family of organelles found in the cytoplasm of plants and some protists, which are membrane-bounded and contain DNA. Plant plastids develop from a common type, the proplastid.

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        RCA1_TOBAC | Q40460: 3zw6

(-) Related Entries Specified in the PDB File

3zw6 RELATED ID: EMD-1940 RELATED DB: EMDB