3SWO - JenaLib

Asym./Biol. Unit (Jmol Viewer)

Asym./Biol. Unit - sites (Jmol Viewer)

Title :   CRYSTAL STRUCTURE OF A GLUTARYL-COA DEHYDROGENASE FROM MYCOBACTERIUM SMEGMATIS IN COMPLEX WITH FADH2

Authors :   Seattle Structural Genomics Center For Infectious Disease (S

Date :   14 Jul 11 (Deposition) - 03 Aug 11 (Release) - 22 Apr 15 (Revision)

Method :   X-RAY DIFFRACTION

Resolution :   1.45

Chains :   Asym./Biol. Unit : A,B,C,D

Keywords :   Ssgcid, Glutaryl-Coa Dehdrogenase, Mycobacerium Smegmatis, Structural Genomics, Seattle Structural Genomics Center For Infectious Disease, Fadh2, Oxidoreductase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   L. Baugh, I. Phan, D. W. Begley, M. C. Clifton, B. Armour, D. M. Dranow, B. M. Taylor, M. M. Muruthi, J. Abendroth, J. W. Fairman, D. Fox, S. H. Dieterich, B. L. Staker, A. S. Gardberg, R. Choi, S. N. Hewitt, A. J. Napuli, J. Myers, L. K. Barrett, Y. Zhang, M. Ferrell, E. Mundt, K. Thompkins, N. Tran, S. Lyons-Abbott, A. Abramov, A. Sekar, D. Serbzhinskiy, D. Lorimer, G. W. Buchko, R. Stacy, L. J. Stewart, T. E. Edwards, W. C. Van Voorhis, P. J. Myler
Increasing The Structural Coverage Of Tuberculosis Drug Targets.
Tuberculosis (Edinb) V. 95 142 2015
PubMed-ID: 25613812 | Reference-DOI: 10.1016/J.TUBE.2014.12.003

Molecule 1 - GLUTARYL-COA DEHYDROGENASE
	Chains	:	A, B, C, D
	EC Number	:	1.3.99.7
	Engineered	:	YES
	Expression System	:	ESCHERICHIA COLI
	Expression System Plasmid	:	AVA0421
	Expression System Strain	:	BL21(DE3)
	Expression System Taxid	:	469008
	Expression System Vector Type	:	PLASMID
	Gene	:	MSMEG_6686
	Organism Scientific	:	MYCOBACTERIUM SMEGMATIS
	Organism Taxid	:	246196
	Strain	:	ATCC 7000084 / MC(2)155

		1	2	3	4
Asymmetric/Biological Unit	:	A	B	C	D

Summary Information (see also Sequences/Alignments below)

Asymmetric/Biological Unit (3, 29)

No.	Name	Count	Type	Full Name
1	EDO	10	Ligand/Ion	1,2-ETHANEDIOL
2	FDA	4	Ligand/Ion	DIHYDROFLAVINE-ADENINE DINUCLEOTIDE
3	UNX	15	Ligand/Ion	UNKNOWN ATOM OR ION

Asymmetric Unit (14, 14)

No.	Name	Evidence	Residues	Description
01	AC1	SOFTWARE	PHE A:141 , LEU A:143 , THR A:144 , GLY A:149 , SER A:150 , TRP A:174 , ILE A:175 , THR A:176 , LEU A:217 , SER A:370 , THR A:373 , TYR A:374 , THR A:377 , GLU A:379 , MET A:380 , PHE A:395 , HOH A:429 , HOH A:446 , HOH A:457 , EDO A:503 , HOH A:521 , HOH A:534 , HOH A:1386 , GLN C:291 , ARG D:280 , VAL D:282 , PHE D:283 , LEU D:287 , TYR D:290 , THR D:348 , LEU D:349 , GLY D:352 , HOH D:523 , HOH D:527	BINDING SITE FOR RESIDUE FDA A 500
02	AC2	SOFTWARE	ARG A:344 , ALA A:365 , GLU A:369 , ARG D:344 , ALA D:365 , GLU D:369	BINDING SITE FOR RESIDUE EDO A 501
03	AC3	SOFTWARE	ARG A:102 , VAL A:107 , LEU A:111 , THR A:176 , TYR A:374 , GLU A:375 , FDA A:500 , HOH A:1386	BINDING SITE FOR RESIDUE EDO A 503
04	AC4	SOFTWARE	GLY A:149 , SER A:150 , LEU A:248 , LEU A:251 , ARG A:255 , GLU A:375 , GLY A:376 , HOH A:841 , HOH A:1247	BINDING SITE FOR RESIDUE EDO A 505
05	AC5	SOFTWARE	PHE B:141 , LEU B:143 , THR B:144 , GLY B:149 , SER B:150 , TRP B:174 , ILE B:175 , THR B:176 , LEU B:217 , SER B:370 , THR B:373 , TYR B:374 , THR B:377 , GLU B:379 , MET B:380 , PHE B:395 , HOH B:406 , HOH B:414 , HOH B:428 , HOH B:431 , HOH B:436 , HOH B:452 , EDO B:503 , HOH B:941 , ARG C:280 , VAL C:282 , PHE C:283 , LEU C:287 , TYR C:290 , THR C:348 , LEU C:349 , GLY C:352 , HOH C:436 , HOH C:1137 , GLN D:291	BINDING SITE FOR RESIDUE FDA B 500
06	AC6	SOFTWARE	ARG B:344 , GLU B:369 , ARG C:344 , ALA C:365 , GLU C:369	BINDING SITE FOR RESIDUE EDO B 501
07	AC7	SOFTWARE	ARG B:102 , SER B:103 , VAL B:107 , THR B:176 , TYR B:374 , GLU B:375 , FDA B:500	BINDING SITE FOR RESIDUE EDO B 503
08	AC8	SOFTWARE	SER B:150 , LEU B:248 , LEU B:251 , ARG B:255 , GLU B:375 , GLY B:376 , MET B:380 , HOH B:725 , HOH B:941 , HOH B:1919	BINDING SITE FOR RESIDUE EDO B 505
09	AC9	SOFTWARE	GLN A:291 , ARG B:280 , VAL B:282 , PHE B:283 , LEU B:287 , TYR B:290 , THR B:348 , LEU B:349 , GLY B:352 , HOH B:424 , HOH B:496 , PHE C:141 , LEU C:143 , THR C:144 , GLY C:149 , SER C:150 , TRP C:174 , ILE C:175 , THR C:176 , LEU C:217 , SER C:370 , THR C:373 , TYR C:374 , THR C:377 , GLU C:379 , MET C:380 , PHE C:395 , HOH C:401 , HOH C:419 , HOH C:434 , HOH C:464 , HOH C:472 , HOH C:478 , EDO C:503	BINDING SITE FOR RESIDUE FDA C 500
10	BC1	SOFTWARE	ARG C:102 , SER C:106 , VAL C:107 , LEU C:111 , THR C:176 , TYR C:374 , GLU C:375 , HOH C:401 , FDA C:500	BINDING SITE FOR RESIDUE EDO C 503
11	BC2	SOFTWARE	LEU C:248 , LEU C:251 , ARG C:255 , GLU C:375 , GLY C:376 , HOH C:580 , HOH C:1110	BINDING SITE FOR RESIDUE EDO C 505
12	BC3	SOFTWARE	ARG A:280 , VAL A:282 , PHE A:283 , LEU A:287 , TYR A:290 , THR A:348 , LEU A:349 , GLY A:352 , HOH A:471 , HOH A:547 , GLN B:291 , PHE D:141 , LEU D:143 , THR D:144 , GLY D:149 , SER D:150 , TRP D:174 , ILE D:175 , THR D:176 , LEU D:217 , SER D:370 , THR D:373 , TYR D:374 , THR D:377 , GLU D:379 , MET D:380 , PHE D:395 , HOH D:425 , HOH D:428 , HOH D:459 , HOH D:461 , HOH D:472 , EDO D:503 , HOH D:1132	BINDING SITE FOR RESIDUE FDA D 500
13	BC4	SOFTWARE	ARG D:102 , SER D:103 , VAL D:107 , THR D:176 , TYR D:374 , GLU D:375 , FDA D:500	BINDING SITE FOR RESIDUE EDO D 503
14	BC5	SOFTWARE	SER D:150 , PRO D:152 , LEU D:248 , LEU D:251 , ARG D:255 , GLU D:375 , GLY D:376 , HOH D:677 , HOH D:1107	BINDING SITE FOR RESIDUE EDO D 505

(no "SS Bond" information available for 3SWO)

(no "Cis Peptide Bond" information available for 3SWO)

(no "SAP(SNP)/Variant" information available for 3SWO)

(no "PROSITE Motif" information available for 3SWO)

(no "Exon" information available for 3SWO)

Asymmetric/Biological Unit

Reformat:	Number of residues per line = ('0' or empty: single-line sequence representation)
	Number of residues per labelling interval =
	UniProt sequence: complete aligned part

Show mapping:	SCOP domains	CATH domains	Pfam domains	Secondary structure (by author)
	SAPs(SNPs)	PROSITE motifs	Exons
	(details for a mapped element are shown in a popup box when the mouse pointer rests over it)

Chain A from PDB  Type:PROTEIN  Length:388
 aligned with A0R6V6_MYCS2 | A0R6V6 from UniProtKB/TrEMBL  Length:397

    Alignment length:388
                                    18        28        38        48        58        68        78        88        98       108       118       128       138       148       158       168       178       188       198       208       218       228       238       248       258       268       278       288       298       308       318       328       338       348       358       368       378       388        
         A0R6V6_MYCS2     9 KSTYAPLELFDTDRLLDQDERDIAATVRQFVDTRLKPNVEGWFESATLPSELAKEFGNLGVLGMHLQGYGCAGTNAVSYGLACMELEAGDSGFRSFVSVQGSLSMFSIYRYGSEEQKNEWLPRLAAGDAIGCFGLTEPDFGSNPAGMRTRARRDGSDWILNGTKMWITNGNLADVATVWAQTDDGIRGFLVPTDTPGFTANEIHRKLSLRASVTSELVLDNVRLPASAQLPLAEGLSAPLSCLNEARFGIVFGALGAARDSLETTIAYTQSREVFDKPLSNYQLTQEKLANMTVELGKGMLLAIHLGRIKDAEGVRPEQISLGKLNNVREAIAIARECRTLLGGSGITLEYSPLRHANNLESVLTYEGTSEMHLLSIGKALTGKAAFR 396
               SCOP domains d3swoa1 A:9-243 automated matches                                                                                                                                                                                                          d3swoa2 A:244-396 automated matches                                                                                                                       SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh....hhhhhhhhhh..............hhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhh....eeee........hhhhh..eeeee..eeeeeeeeeeee......eeeeee......eeeeee.....eeeee...........eeeeeeeeeeehhhhh......hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhee..ee...hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhh..hhhhhhhhhhhhhhh..... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3swo A   9 KSTYAPLELFDTDRLLDQDERDIAATVRQFVDTRLKPNVEGWFESATLPSELAKEFGNLGVLGMHLQGYGCAGTNAVSYGLACMELEAGDSGFRSFVSVQGSLSMFSIYRYGSEEQKNEWLPRLAAGDAIGCFGLTEPDFGSNPAGMRTRARRDGSDWILNGTKMWITNGNLADVATVWAQTDDGIRGFLVPTDTPGFTANEIHRKLSLRASVTSELVLDNVRLPASAQLPLAEGLSAPLSCLNEARFGIVFGALGAARDSLETTIAYTQSREVFDKPLSNYQLTQEKLANMTVELGKGMLLAIHLGRIKDAEGVRPEQISLGKLNNVREAIAIARECRTLLGGSGITLEYSPLRHANNLESVLTYEGTSEMHLLSIGKALTGKAAFR 396
                                    18        28        38        48        58        68        78        88        98       108       118       128       138       148       158       168       178       188       198       208       218       228       238       248       258       268       278       288       298       308       318       328       338       348       358       368       378       388

Chain B from PDB  Type:PROTEIN  Length:386
 aligned with A0R6V6_MYCS2 | A0R6V6 from UniProtKB/TrEMBL  Length:397

    Alignment length:386
                                    20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390      
         A0R6V6_MYCS2    11 TYAPLELFDTDRLLDQDERDIAATVRQFVDTRLKPNVEGWFESATLPSELAKEFGNLGVLGMHLQGYGCAGTNAVSYGLACMELEAGDSGFRSFVSVQGSLSMFSIYRYGSEEQKNEWLPRLAAGDAIGCFGLTEPDFGSNPAGMRTRARRDGSDWILNGTKMWITNGNLADVATVWAQTDDGIRGFLVPTDTPGFTANEIHRKLSLRASVTSELVLDNVRLPASAQLPLAEGLSAPLSCLNEARFGIVFGALGAARDSLETTIAYTQSREVFDKPLSNYQLTQEKLANMTVELGKGMLLAIHLGRIKDAEGVRPEQISLGKLNNVREAIAIARECRTLLGGSGITLEYSPLRHANNLESVLTYEGTSEMHLLSIGKALTGKAAFR 396
               SCOP domains d3swob1 B:11-243 automated matches                                                                                                                                                                                                       d3swob2 B:244-396 automated matches                                                                                                                       SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh....hhhhhhhhhh..............hhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhh....eeee........hhhhh..eeeee..eeeeeeeeeeee......eeeeee......eeeeee.....eeeee...........eeeeeeeeeeehhhhh......hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhee..ee...hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhh..hhhhhhhhhhhhhhh..... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3swo B  11 TYAPLELFDTDRLLDQDERDIAATVRQFVDTRLKPNVEGWFESATLPSELAKEFGNLGVLGMHLQGYGCAGTNAVSYGLACMELEAGDSGFRSFVSVQGSLSMFSIYRYGSEEQKNEWLPRLAAGDAIGCFGLTEPDFGSNPAGMRTRARRDGSDWILNGTKMWITNGNLADVATVWAQTDDGIRGFLVPTDTPGFTANEIHRKLSLRASVTSELVLDNVRLPASAQLPLAEGLSAPLSCLNEARFGIVFGALGAARDSLETTIAYTQSREVFDKPLSNYQLTQEKLANMTVELGKGMLLAIHLGRIKDAEGVRPEQISLGKLNNVREAIAIARECRTLLGGSGITLEYSPLRHANNLESVLTYEGTSEMHLLSIGKALTGKAAFR 396
                                    20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390

Chain C from PDB  Type:PROTEIN  Length:386
 aligned with A0R6V6_MYCS2 | A0R6V6 from UniProtKB/TrEMBL  Length:397

    Alignment length:386
                                    20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390      
         A0R6V6_MYCS2    11 TYAPLELFDTDRLLDQDERDIAATVRQFVDTRLKPNVEGWFESATLPSELAKEFGNLGVLGMHLQGYGCAGTNAVSYGLACMELEAGDSGFRSFVSVQGSLSMFSIYRYGSEEQKNEWLPRLAAGDAIGCFGLTEPDFGSNPAGMRTRARRDGSDWILNGTKMWITNGNLADVATVWAQTDDGIRGFLVPTDTPGFTANEIHRKLSLRASVTSELVLDNVRLPASAQLPLAEGLSAPLSCLNEARFGIVFGALGAARDSLETTIAYTQSREVFDKPLSNYQLTQEKLANMTVELGKGMLLAIHLGRIKDAEGVRPEQISLGKLNNVREAIAIARECRTLLGGSGITLEYSPLRHANNLESVLTYEGTSEMHLLSIGKALTGKAAFR 396
               SCOP domains d3swoc1 C:11-243 automated matches                                                                                                                                                                                                       d3swoc2 C:244-396 automated matches                                                                                                                       SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhh....hhhhhhhhhh..............hhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhh....eeee........hhhhh..eeeee..eeeeeeeeeeee......eeeeee......eeeeee.....eeeee...........eeeeeeeeeeehhhhh......hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhee..ee...hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhh..hhhhhhhhhhhhhhh..... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3swo C  11 TYAPLELFDTDRLLDQDERDIAATVRQFVDTRLKPNVEGWFESATLPSELAKEFGNLGVLGMHLQGYGCAGTNAVSYGLACMELEAGDSGFRSFVSVQGSLSMFSIYRYGSEEQKNEWLPRLAAGDAIGCFGLTEPDFGSNPAGMRTRARRDGSDWILNGTKMWITNGNLADVATVWAQTDDGIRGFLVPTDTPGFTANEIHRKLSLRASVTSELVLDNVRLPASAQLPLAEGLSAPLSCLNEARFGIVFGALGAARDSLETTIAYTQSREVFDKPLSNYQLTQEKLANMTVELGKGMLLAIHLGRIKDAEGVRPEQISLGKLNNVREAIAIARECRTLLGGSGITLEYSPLRHANNLESVLTYEGTSEMHLLSIGKALTGKAAFR 396
                                    20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390

Chain D from PDB  Type:PROTEIN  Length:386
 aligned with A0R6V6_MYCS2 | A0R6V6 from UniProtKB/TrEMBL  Length:397

    Alignment length:386
                                    20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390      
         A0R6V6_MYCS2    11 TYAPLELFDTDRLLDQDERDIAATVRQFVDTRLKPNVEGWFESATLPSELAKEFGNLGVLGMHLQGYGCAGTNAVSYGLACMELEAGDSGFRSFVSVQGSLSMFSIYRYGSEEQKNEWLPRLAAGDAIGCFGLTEPDFGSNPAGMRTRARRDGSDWILNGTKMWITNGNLADVATVWAQTDDGIRGFLVPTDTPGFTANEIHRKLSLRASVTSELVLDNVRLPASAQLPLAEGLSAPLSCLNEARFGIVFGALGAARDSLETTIAYTQSREVFDKPLSNYQLTQEKLANMTVELGKGMLLAIHLGRIKDAEGVRPEQISLGKLNNVREAIAIARECRTLLGGSGITLEYSPLRHANNLESVLTYEGTSEMHLLSIGKALTGKAAFR 396
               SCOP domains d3swod1 D:11-243 automated matches                                                                                                                                                                                                       d3swod2 D:244-396 automated matches                                                                                                                       SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhh....hhhhhhhhhh..............hhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhh....eeee........hhhhh..eeeee..eeeeeeeeeeee......eeeeee......eeeeee.....eeeee...........eeeeeeeeeeehhhhh......hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhee..ee...hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhh..hhhhhhhhhhhhhhh..... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3swo D  11 TYAPLELFDTDRLLDQDERDIAATVRQFVDTRLKPNVEGWFESATLPSELAKEFGNLGVLGMHLQGYGCAGTNAVSYGLACMELEAGDSGFRSFVSVQGSLSMFSIYRYGSEEQKNEWLPRLAAGDAIGCFGLTEPDFGSNPAGMRTRARRDGSDWILNGTKMWITNGNLADVATVWAQTDDGIRGFLVPTDTPGFTANEIHRKLSLRASVTSELVLDNVRLPASAQLPLAEGLSAPLSCLNEARFGIVFGALGAARDSLETTIAYTQSREVFDKPLSNYQLTQEKLANMTVELGKGMLLAIHLGRIKDAEGVRPEQISLGKLNNVREAIAIARECRTLLGGSGITLEYSPLRHANNLESVLTYEGTSEMHLLSIGKALTGKAAFR 396
                                    20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390

Legend:		→ Mismatch	(orange background)
	-	→ Gap	(green background, '-', border residues have a numbering label)
		→ Modified Residue	(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
	x	→ Chemical Group	(purple background, 'x', labelled with number + name, e.g. ACE or NH2)
	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '\|'

Asymmetric/Biological Unit

Classes(

)

Folds(

)

Superfamilies( (-)

)

Families(

)

Protein Domains( (-)

)

Organisms( (-)

)

Class: All alpha proteins (14657)

Fold: Bromodomain-like (339)

Superfamily: Acyl-CoA dehydrogenase C-terminal domain-like (61)

Family: automated matches (29)

Protein domain: automated matches (29)

Mycobacterium smegmatis [TaxId: 246196] (3)

1a	d3swoa2	A:244-396
1b	d3swob2	B:244-396
1c	d3swoc2	C:244-396
1d	d3swod2	D:244-396

Class: Multi-domain proteins (alpha and beta) (2421)

Fold: Acyl-CoA dehydrogenase NM domain-like (61)

Superfamily: Acyl-CoA dehydrogenase NM domain-like (61)

Family: automated matches (26)

Protein domain: automated matches (26)

Mycobacterium smegmatis [TaxId: 246196] (3)

2a	d3swoa1	A:9-243
2b	d3swob1	B:11-243
2c	d3swoc1	C:11-243
2d	d3swod1	D:11-243

(no "CATH Domain" information available for 3SWO)

(no "Pfam Domain" information available for 3SWO)

Asymmetric/Biological Unit(hide GO term definitions)

Chain A,B,C,D (A0R6V6_MYCS2 | A0R6V6)

molecular function
	GO:0003995	acyl-CoA dehydrogenase activity	Catalysis of the reaction: acyl-CoA + acceptor = 2,3-dehydroacyl-CoA + reduced acceptor.
	GO:0050660	flavin adenine dinucleotide binding	Interacting selectively and non-covalently with FAD, flavin-adenine dinucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes, in either the oxidized form, FAD, or the reduced form, FADH2.
	GO:0016491	oxidoreductase activity	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
	GO:0016627	oxidoreductase activity, acting on the CH-CH group of donors	Catalysis of an oxidation-reduction (redox) reaction in which a CH-CH group acts as a hydrogen or electron donor and reduces a hydrogen or electron acceptor.
biological process
	GO:0008152	metabolic process	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.
	GO:0055114	oxidation-reduction process	A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.

Asymmetric/Biological Unit
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	Cis Peptide Bonds
(no "Cis Peptide Bonds" information available for 3swo)

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Access by PDB/NDB ID
	3swo
		Family and Domain Information	:	ProDom \| SYSTERS
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		Orientation in Membranes	:	OPM
		Protein Surface	:	SURFACE
		Secondary Structure	:	DSSP (structure derived) \| HSSP (homology derived)
		Structural Genomics	:	GeneCensus
		Structural Neighbours	:	CE \| VAST
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Access by UniProt ID/Accession number
	A0R6V6_MYCS2 \| A0R6V6
		Comparative Protein Structure Models	:	ModBase
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		Protein-protein Interaction	:	DIP
		Sequence, Family and Domain Information	:	InterPro \| Pfam \| SMART \| UniProtKB/TrEMBL

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	1.3.99.7
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	A0R6V6_MYCS2 \| A0R6V6
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(no "Entries Sharing at Least One Protein Chain" available for 3SWO)

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Description

Compounds

Structural Features

Chains, Units

Ligands, Modified Residues, Ions (3, 29)

Sites (14, 14)

SS Bonds (0, 0)

Cis Peptide Bonds (0, 0)

Sequence-Structure Mapping

SAPs(SNPs)/Variants (0, 0)

PROSITE Motifs (0, 0)

Exons (0, 0)

Sequences/Alignments

Classification and Annotation

SCOP Domains (2, 8)

CATH Domains (0, 0)

Pfam Domains (0, 0)

Gene Ontology (6, 6)

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Databases

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Related Entries

Entries Sharing at Least One Protein Chain (UniProt ID)

Related Entries Specified in the PDB File