3S9C - JenaLib

Asym./Biol. Unit (Jmol Viewer)

Asym./Biol. Unit - sites (Jmol Viewer)

Title :   RUSSELL'S VIPER VENOM SERINE PROTEINASE, RVV-V IN COMPLEX WITH THE FRAGMENT (RESIDUES 1533-1546) OF HUMAN FACTOR V

Authors :   D. Nakayama, Y. Ben Ammar, S. Takeda

Date :   01 Jun 11 (Deposition) - 07 Sep 11 (Release) - 03 Jul 13 (Revision)

Method :   X-RAY DIFFRACTION

Resolution :   1.80

Chains :   Asym./Biol. Unit : A,B

Keywords :   Serine Proteinase, Double Six-Stranded Beta-Barrels, Hydrolase, Glycosylation (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   D. Nakayama, Y. Ben Ammar, T. Miyata, S. Takeda
Structural Basis Of Coagulation Factor V Recognition For Cleavage By Rvv-V
Febs Lett. V. 585 3020 2011
PubMed-ID: 21871889 | Reference-DOI: 10.1016/J.FEBSLET.2011.08.022
(for further references see the PDB file header)

Molecule 1 - VIPERA RUSSELLI PROTEINASE RVV-V GAMMA
	Chains	:	A
	EC Number	:	3.4.21.95
	Organism Common	:	SIAMESE RUSSELL'S VIPER
	Organism Scientific	:	DABOIA RUSSELLII SIAMENSIS
	Organism Taxid	:	343250
	Synonym	:	FACTOR V-ACTIVATING PROTEINASE GAMMA, SNAKE VENOM FACTOR V ACTIVATOR GAMMA
	Tissue	:	VENOM

Molecule 2 - COAGULATION FACTOR V
	Chains	:	B
	Engineered	:	YES
	Fragment	:	UNP RESIDUES 1561-1574
	Organism Common	:	HUMAN
	Organism Scientific	:	HOMO SAPIENS
	Organism Taxid	:	9606
	Other Details	:	SYNTHETIC PEPTIDE
	Synonym	:	ACTIVATED PROTEIN C COFACTOR, PROACCELERIN, LABILE FACTOR
	Synthetic	:	YES

		1	2
Asymmetric/Biological Unit	:	A	B

Summary Information (see also Sequences/Alignments below)

Asymmetric/Biological Unit (6, 12)

No.	Name	Count	Type	Full Name
1	ACT	4	Ligand/Ion	ACETATE ION
2	BGC	1	Ligand/Ion	BETA-D-GLUCOSE
3	BMA	1	Ligand/Ion	BETA-D-MANNOSE
4	GLC	1	Ligand/Ion	ALPHA-D-GLUCOSE
5	NAG	2	Ligand/Ion	N-ACETYL-D-GLUCOSAMINE
6	ZN	3	Ligand/Ion	ZINC ION

Asymmetric Unit (12, 12)

No.	Name	Evidence	Residues	Description
01	AC1	SOFTWARE	ASN A:245 , NAG A:802	BINDING SITE FOR RESIDUE NAG A 801
02	AC2	SOFTWARE	NAG A:801 , BMA A:803	BINDING SITE FOR RESIDUE NAG A 802
03	AC3	SOFTWARE	HOH A:405 , HOH A:411 , NAG A:802	BINDING SITE FOR RESIDUE BMA A 803
04	AC4	SOFTWARE	TYR A:34 , SER A:38 , ILE A:40 , LYS A:67 , MET A:70 , LYS A:73 , HOH A:251 , HOH A:342	BINDING SITE FOR RESIDUE BGC A 701
05	AC5	SOFTWARE	ARG A:135 , ARG A:137 , ASN A:159 , CYS A:201 , ASN A:202 , GLY A:207	BINDING SITE FOR RESIDUE GLC A 702
06	AC6	SOFTWARE	LYS A:143 , THR A:146 , CYS A:191 , HIS A:192 , GLU A:218 , PRO A:219 , CYS A:220 , HIS A:222 , ZN A:501	BINDING SITE FOR RESIDUE ACT A 901
07	AC7	SOFTWARE	ILE A:144 , HIS A:156 , HOH A:326 , HOH A:367 , ZN A:502	BINDING SITE FOR RESIDUE ACT A 902
08	AC8	SOFTWARE	ASN A:25 , THR A:116 , HIS A:117 , HOH A:388 , ZN A:503 , ACT A:904	BINDING SITE FOR RESIDUE ACT A 903
09	AC9	SOFTWARE	ILE A:24 , ASN A:25 , HIS A:117 , HOH A:283 , ZN A:503 , ACT A:903	BINDING SITE FOR RESIDUE ACT A 904
10	BC1	SOFTWARE	HIS A:192 , GLU A:218 , HIS A:222 , ACT A:901	BINDING SITE FOR RESIDUE ZN A 501
11	BC2	SOFTWARE	HOH A:150 , HIS A:156 , HOH A:367 , HOH A:368 , ACT A:902	BINDING SITE FOR RESIDUE ZN A 502
12	BC3	SOFTWARE	ASN A:25 , HIS A:117 , ACT A:903 , ACT A:904	BINDING SITE FOR RESIDUE ZN A 503

Asymmetric/Biological Unit

No.	Residues
1	A:22	-	A:157
2	A:42	-	A:58
3	A:91	-	A:245E
4	A:136	-	A:201
5	A:168	-	A:182
6	A:191	-	A:220

Asymmetric/Biological Unit

No.	Residues
1	Glu A:218	-	Pro A:219

(no "SAP(SNP)/Variant" information available for 3S9C)

Asymmetric/Biological Unit (3, 3)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	TRYPSIN_DOM	PS50240	Serine proteases, trypsin domain profile.	VSPG_DABSI	25-251	1	A:16-243
2	TRYPSIN_HIS	PS00134	Serine proteases, trypsin family, histidine active site.	VSPG_DABSI	63-68	1	A:53-58
3	TRYPSIN_SER	PS00135	Serine proteases, trypsin family, serine active site.	VSPG_DABSI	200-211	1	A:189-200

Asymmetric/Biological Unit (1, 1)

	ENSEMBL					UniProtKB			PDB
No.	Transcript ID	Exon	Exon ID	Genome Location	Length	ID	Location	Length	Count	Location	Length
1.1	ENST00000367797	1	ENSE00001673787	chr1:169555826-169555467	360	FA5_HUMAN	1-53	53	0	-	-
1.2	ENST00000367797	2	ENSE00000789613	chr1:169551760-169551669	92	FA5_HUMAN	53-84	32	0	-	-
1.3	ENST00000367797	3	ENSE00000789612	chr1:169541581-169541459	123	FA5_HUMAN	84-125	42	0	-	-
1.4	ENST00000367797	4	ENSE00000789611	chr1:169530004-169529792	213	FA5_HUMAN	125-196	72	0	-	-
1.5	ENST00000367797	5	ENSE00000789610	chr1:169528534-169528391	144	FA5_HUMAN	196-244	49	0	-	-
1.6	ENST00000367797	6	ENSE00001435704	chr1:169526105-169525884	222	FA5_HUMAN	244-318	75	0	-	-
1.7	ENST00000367797	7	ENSE00001435673	chr1:169524585-169524420	166	FA5_HUMAN	318-373	56	0	-	-
1.8	ENST00000367797	8	ENSE00000789607	chr1:169521972-169521795	178	FA5_HUMAN	373-432	60	0	-	-
1.9	ENST00000367797	9	ENSE00000789606	chr1:169519977-169519878	100	FA5_HUMAN	433-466	34	0	-	-
1.10	ENST00000367797	10	ENSE00000789605	chr1:169519253-169519039	215	FA5_HUMAN	466-537	72	0	-	-
1.11	ENST00000367797	11	ENSE00000789604	chr1:169515830-169515680	151	FA5_HUMAN	538-588	51	0	-	-
1.12b	ENST00000367797	12b	ENSE00000789603	chr1:169513746-169513534	213	FA5_HUMAN	588-659	72	0	-	-
1.13	ENST00000367797	13	ENSE00000814494	chr1:169512352-169509532	2821	FA5_HUMAN	659-1599	941	1	B:1539-1545	7
1.14	ENST00000367797	14	ENSE00000814495	chr1:169505918-169505744	175	FA5_HUMAN	1599-1657	59	0	-	-
1.15	ENST00000367797	15	ENSE00000814496	chr1:169500260-169500024	237	FA5_HUMAN	1658-1736	79	0	-	-
1.16	ENST00000367797	16	ENSE00001376235	chr1:169499056-169498846	211	FA5_HUMAN	1737-1807	71	0	-	-
1.17	ENST00000367797	17	ENSE00001388919	chr1:169497332-169497153	180	FA5_HUMAN	1807-1867	61	0	-	-
1.18	ENST00000367797	18	ENSE00001367181	chr1:169495255-169495139	117	FA5_HUMAN	1867-1906	40	0	-	-
1.19	ENST00000367797	19	ENSE00001168291	chr1:169494146-169494075	72	FA5_HUMAN	1906-1930	25	0	-	-
1.20	ENST00000367797	20	ENSE00001168281	chr1:169493142-169493039	104	FA5_HUMAN	1930-1964	35	0	-	-
1.21	ENST00000367797	21	ENSE00000814502	chr1:169492590-169492435	156	FA5_HUMAN	1965-2016	52	0	-	-
1.22	ENST00000367797	22	ENSE00000814503	chr1:169489902-169489758	145	FA5_HUMAN	2017-2065	49	0	-	-
1.23	ENST00000367797	23	ENSE00001168273	chr1:169487801-169487650	152	FA5_HUMAN	2065-2115	51	0	-	-
1.24b	ENST00000367797	24b	ENSE00000814505	chr1:169484864-169484682	183	FA5_HUMAN	2116-2176	61	0	-	-
1.25	ENST00000367797	25	ENSE00001627321	chr1:169483697-169483404	294	FA5_HUMAN	2177-2224	48	0	-	-

Asymmetric/Biological Unit

Reformat:	Number of residues per line = ('0' or empty: single-line sequence representation)
	Number of residues per labelling interval =
	UniProt sequence: complete aligned part

Show mapping:	SCOP domains	CATH domains	Pfam domains	Secondary structure (by author)
	SAPs(SNPs)	PROSITE motifs	Exons
	(details for a mapped element are shown in a popup box when the mouse pointer rests over it)

Chain A from PDB  Type:PROTEIN  Length:234
 aligned with VSPG_DABSI | P18965 from UniProtKB/Swiss-Prot  Length:260

    Alignment length:236
                                    34        44        54        64        74        84        94       104       114       124       134       144       154       164       174       184       194       204       214       224       234       244       254      
          VSPG_DABSI     25 VVGGDECNINEHPFLVALYTSASSTIHCAGALINREWVLTAAHCDRRNIRIKLGMHSKNIRNEDEQIRVPRGKYFCLNTKFPNGLDKDIMLIRLRRPVTYSTHIAPVSLPSRSRGVGSRCRIMGWGKISTTEDTYPDVPHCTNIFIVKHKWCEPLYPWVPADSRTLCAGILKGGRDTCHGDSGGPLICNGEMHGIVAGGSEPCGQHLKPAVYTKVFDYNNWIQSIIAGNRTVTCPP  260
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....ee........eeeeee..eeeeeeeeeeee..eeeehhhhh...eeeee............eee.eeeee.........hhhhh.eeeee........................eeeeee.........--....eeeeeeeehhhhh............eeeee...............eeee..eeeeeeee...........eeeee...hhhhhhhhhhh........ Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (1) TRYPSIN_DOM  PDB: A:16-243 UniProt: 25-251                                                                                                                                                                                         --------- PROSITE (1)
                PROSITE (2) --------------------------------------TRYPSI-----------------------------------------------------------------------------------------------------------------------------------TRYPSIN_SER ------------------------------------------------- PROSITE (2)
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                3s9c A   16 VVGGDECNINEHPFLVALYTSASSTIHCAGALINREWVLTAAHCDRRNIRIKLGMHSKNIRNEDEQIRVPRGKYFCLNTKFPNGLDKDIMLIRLRRPVTYSTHIAPVSLPSRSRGVGSRCRIMGWGKISTTTY--PDVPHCTNIFIVKHKWCEPLYPWVPADSRTLCAGILKGGRDTCHGDSGGPLICNGEMHGIVAGGSEPCGQHLKPAVYTKVFDYNNWIQSIIAGNRTVTCPP 245G
                                    25        35 |      44        54     || 65        75        85        95|      104       114       124|| ||  136       146  |  | 156       166      |175       185 ||    193       207       217    |  226       236      245A||||||
                                               36A                      60|                               95A                           125| ||               149  |                 172A           186A|             202|           221A                     245A||||||
                                                                         62                                                              127 ||                  152                                 186B              207                                     245B|||||
                                                                                                                                           129|                                                                                                                 245C||||
                                                                                                                                            131                                                                                                                  245D|||
                                                                                                                                                                                                                                                                  245E||
                                                                                                                                                                                                                                                                   245F|
                                                                                                                                                                                                                                                                    245G

Chain B from PDB  Type:PROTEIN  Length:7
 aligned with FA5_HUMAN | P12259 from UniProtKB/Swiss-Prot  Length:2224

    Alignment length:7
           FA5_HUMAN   1567 IAAWYLR 1573
               SCOP domains ------- SCOP domains
               CATH domains ------- CATH domains
               Pfam domains ------- Pfam domains
         Sec.struct. author ....... Sec.struct. author
                 SAPs(SNPs) ------- SAPs(SNPs)
                    PROSITE ------- PROSITE
               Transcript 1 1.13    Transcript 1
                3s9c B 1539 IAAWYLR 1545

Legend:		→ Mismatch	(orange background)
	-	→ Gap	(green background, '-', border residues have a numbering label)
		→ Modified Residue	(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
	x	→ Chemical Group	(purple background, 'x', labelled with number + name, e.g. ACE or NH2)
	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '\|'

(no "SCOP Domain" information available for 3S9C)

(no "CATH Domain" information available for 3S9C)

(no "Pfam Domain" information available for 3S9C)

Asymmetric/Biological Unit(hide GO term definitions)

Chain A (VSPG_DABSI | P18965)

molecular function
	GO:0016787	hydrolase activity	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3.
	GO:0008233	peptidase activity	Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid.
	GO:0004252	serine-type endopeptidase activity	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine).
	GO:0008236	serine-type peptidase activity	Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine).
biological process
	GO:0006508	proteolysis	The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds.
cellular component
	GO:0005576	extracellular region	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite.

Chain B (FA5_HUMAN | P12259)

molecular function
	GO:0005507	copper ion binding	Interacting selectively and non-covalently with copper (Cu) ions.
	GO:0046872	metal ion binding	Interacting selectively and non-covalently with any metal ion.
	GO:0005515	protein binding	Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
biological process
	GO:0048208	COPII vesicle coating	The addition of COPII proteins and adaptor proteins to ER membranes during the formation of transport vesicles, forming a vesicle coat.
	GO:0006888	ER to Golgi vesicle-mediated transport	The directed movement of substances from the endoplasmic reticulum (ER) to the Golgi, mediated by COP II vesicles. Small COP II coated vesicles form from the ER and then fuse directly with the cis-Golgi. Larger structures are transported along microtubules to the cis-Golgi.
	GO:0008015	blood circulation	The flow of blood through the body of an animal, enabling the transport of nutrients to the tissues and the removal of waste products.
	GO:0007596	blood coagulation	The sequential process in which the multiple coagulation factors of the blood interact, ultimately resulting in the formation of an insoluble fibrin clot; it may be divided into three stages: stage 1, the formation of intrinsic and extrinsic prothrombin converting principle; stage 2, the formation of thrombin; stage 3, the formation of stable fibrin polymers.
	GO:0007599	hemostasis	The stopping of bleeding (loss of body fluid) or the arrest of the circulation to an organ or part.
	GO:0030168	platelet activation	A series of progressive, overlapping events triggered by exposure of the platelets to subendothelial tissue. These events include shape change, adhesiveness, aggregation, and release reactions. When carried through to completion, these events lead to the formation of a stable hemostatic plug.
	GO:0002576	platelet degranulation	The regulated exocytosis of secretory granules containing preformed mediators such as histamine and serotonin by a platelet.
cellular component
	GO:0030134	COPII-coated ER to Golgi transport vesicle	A vesicle with a coat formed of the COPII coat complex proteins. The COPII coat complex is formed by the Sec23p/Sec24p and the Sec13p/Sec31p heterodimers. COPII-associated vesicles transport proteins from the rough endoplasmic reticulum to the Golgi apparatus (anterograde transport).
	GO:0000139	Golgi membrane	The lipid bilayer surrounding any of the compartments of the Golgi apparatus.
	GO:0005788	endoplasmic reticulum lumen	The volume enclosed by the membranes of the endoplasmic reticulum.
	GO:0033116	endoplasmic reticulum-Golgi intermediate compartment membrane	The lipid bilayer surrounding any of the compartments of the endoplasmic reticulum (ER)-Golgi intermediate compartment system.
	GO:0005576	extracellular region	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite.
	GO:0005615	extracellular space	That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid.
	GO:1903561	extracellular vesicle	Any vesicle that is part of the extracellular region.
	GO:0016020	membrane	A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
	GO:0005886	plasma membrane	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins.
	GO:0031091	platelet alpha granule	A secretory organelle found in blood platelets, which is unique in that it exhibits further compartmentalization and acquires its protein content via two distinct mechanisms: (1) biosynthesis predominantly at the megakaryocyte (MK) level (with some vestigial platelet synthesis) (e.g. platelet factor 4) and (2) endocytosis and pinocytosis at both the MK and circulating platelet levels (e.g. fibrinogen (Fg) and IgG).
	GO:0031093	platelet alpha granule lumen	The volume enclosed by the membrane of the platelet alpha granule.

Asymmetric/Biological Unit
	Complete Structure
		Jena3D(integrated viewing of ligand, site, SAP, PROSITE, SCOP information)
		WebMol \| AstexViewer[tm]@PDBe (Java Applets, require no local installation except for Java; loading may be slow)
		STRAP (Java WebStart application, automatic local installation, requires Java; full application with system access!)
		RasMol (require local installation)
		Molscript (VRML) (requires installation of a VRML viewer; select preferred view via VRML and generate a mono or stereo PDF format file)

	Ligands, Modified Residues, Ions
		ACT	[ RasMol \| Jena3D ]	+environment [ RasMol \| Jena3D ]
		BGC	[ RasMol \| Jena3D ]	+environment [ RasMol \| Jena3D ]
		BMA	[ RasMol \| Jena3D ]	+environment [ RasMol \| Jena3D ]
		GLC	[ RasMol \| Jena3D ]	+environment [ RasMol \| Jena3D ]
		NAG	[ RasMol \| Jena3D ]	+environment [ RasMol \| Jena3D ]
		ZN	[ RasMol \| Jena3D ]	+environment [ RasMol \| Jena3D ]

	Sites
		AC1	[ RasMol ]	+environment [ RasMol ]
		AC2	[ RasMol ]	+environment [ RasMol ]
		AC3	[ RasMol ]	+environment [ RasMol ]
		AC4	[ RasMol ]	+environment [ RasMol ]
		AC5	[ RasMol ]	+environment [ RasMol ]
		AC6	[ RasMol ]	+environment [ RasMol ]
		AC7	[ RasMol ]	+environment [ RasMol ]
		AC8	[ RasMol ]	+environment [ RasMol ]
		AC9	[ RasMol ]	+environment [ RasMol ]
		BC1	[ RasMol ]	+environment [ RasMol ]
		BC2	[ RasMol ]	+environment [ RasMol ]
		BC3	[ RasMol ]	+environment [ RasMol ]

	Cis Peptide Bonds
		Glu A:218 - Pro A:219	[ RasMol ]

Jmol
	protein: cartoon or spacefill or dots and stick; nucleic acid: cartoon and stick; ligands: spacefill; active site: stick [ Asym./Biol. Unit PNG format \| Asym./Biol. Unit - sites PNG format ](automatic orientation, automatically generated)
Molscript
	protein, nucleic acid: cartoon; ligands: spacefill; active site: ball and stick [ mono PDF format \| stereo PDF format ](default orientation, automatically generated)

Access by PDB/NDB ID
	3s9c
		Family and Domain Information	:	ProDom \| SYSTERS
		General Structural Information	:	GlycoscienceDB \| MMDB \| NDB \| OCA \| PDB \| PDBe \| PDBj \| PDBsum \| PDBWiki \| PQS \| PROTEOPEDIA
		Orientation in Membranes	:	OPM
		Protein Surface	:	SURFACE
		Secondary Structure	:	DSSP (structure derived) \| HSSP (homology derived)
		Structural Genomics	:	GeneCensus
		Structural Neighbours	:	CE \| VAST
		Structure Classification	:	CATH \| Dali \| SCOP
		Validation and Original Data	:	BMRB Data View \| BMRB Restraints Grid \| EDS \| PROCHECK \| RECOORD \| WHAT_CHECK

Access by UniProt ID/Accession number
	FA5_HUMAN \| P12259
		Comparative Protein Structure Models	:	ModBase
		Genomic Information	:	Ensembl
		Protein-protein Interaction	:	DIP
		Sequence, Family and Domain Information	:	InterPro \| Pfam \| SMART \| UniProtKB/SwissProt
	VSPG_DABSI \| P18965
		Comparative Protein Structure Models	:	ModBase
		Genomic Information	:	Ensembl
		Protein-protein Interaction	:	DIP
		Sequence, Family and Domain Information	:	InterPro \| Pfam \| SMART \| UniProtKB/SwissProt

Access by Enzyme Classificator (EC Number)
	3.4.21.95
		General Enzyme Information	:	BRENDA \| EC-PDB \| Enzyme \| IntEnz
		Pathway	:	KEGG \| MetaCyc

Access by Disease Identifier (MIM ID)
	(no 'MIM ID' available)
		Disease Information	:	OMIM

Access by GenAge ID
	(no 'GenAge ID' available)
		Age Related Information	:	GenAge

Access by PDB/NDB ID
		Domain Information	:	XDom
		Interatomic Contacts of Structural Units	:	CSU
		Ligand-protein Contacts	:	LPC
		Protein Cavities	:	castP
		Sequence and Secondary Structure	:	PDBCartoon
		Structure Alignment	:	STRAP(Java WebStart application, automatic local installation, requires Java; full application with system access!)
		Structure and Sequence Browser	:	STING

Access by UniProt ID/Accession number
	FA5_HUMAN \| P12259
		Protein Disorder Prediction	:	DisEMBL \| FoldIndex \| GLOBPLOT (for more information see DisProt)
	VSPG_DABSI \| P18965
		Protein Disorder Prediction	:	DisEMBL \| FoldIndex \| GLOBPLOT (for more information see DisProt)

UniProtKB/Swiss-Prot
	FA5_HUMAN \| P12259	:	1czs 1czt 1czv 1fv4 1y61 3p6z 3p70
	VSPG_DABSI \| P18965	:	3s9a 3s9b 3sbk

Description

Compounds

Structural Features

Chains, Units

Ligands, Modified Residues, Ions (6, 12)

Sites (12, 12)

SS Bonds (6, 6)

Cis Peptide Bonds (1, 1)

Sequence-Structure Mapping

SAPs(SNPs)/Variants (0, 0)

PROSITE Motifs (3, 3)

Exons (1, 1)

Sequences/Alignments

Classification and Annotation

SCOP Domains (0, 0)

CATH Domains (0, 0)

Pfam Domains (0, 0)

Gene Ontology (26, 27)

Visualization

Interactive Views

Still Images

Databases and Analysis Tools

Databases

Analysis Tools

Related Entries

Entries Sharing at Least One Protein Chain (UniProt ID)

Related Entries Specified in the PDB File