3S2Q - JenaLib

Title :   THE CRYSTAL STRUCTURE OF AT5G51720 (AT-NEET)

Authors :   O. Livnah, Y. Eisenberg-Domovich, R. Nechushtai

Date :   17 May 11 (Deposition) - 23 May 12 (Release) - 23 May 12 (Revision)

Method :   X-RAY DIFFRACTION

Resolution :   1.75

Chains :   Asym. Unit : A,B
Biol. Unit 1: A,B  (1x)
Biol. Unit 2: A,B  (2x)

Keywords :   Redox, Fe-S Cluster, Metal Binding Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   R. Nechushtai, A. R. Conlan, L. Song, Y. Harir, O. Yogev, Y. Eisenberg-Domovich, O. Livnah, D. Michaeli, R. Rosen, V. Ma, L. Yuting, J. A. Zuris, V. Shulaev, M. L. Paddock, Z. Y. Cabantchik, P. A. Jennings, R. Mittler
Arabidopsis Thaliana Chloroneet, A Member Of The New Neet Family Of Human Proteins, Is Involved In Development, Senescence And Iron Metabolism.
To Be Published
PubMed: search

Compounds

Molecule 1 - AT5G51720/MIO24_14
	Chains	:	A, B
	Engineered	:	YES
	Expression System	:	ESCHERICHIA COLI
	Expression System Taxid	:	562
	Fragment	:	UNP RESIDUES 30-108
	Gene	:	AT5G51720
	Organism Common	:	MOUSE-EAR CRESS,THALE-CRESS
	Organism Scientific	:	ARABIDOPSIS THALIANA
	Organism Taxid	:	3702

Structural Features

Chains, Units

		1	2
Asymmetric Unit	:	A	B
Biological Unit 1 (1x)	:	A	B
Biological Unit 2 (2x)	:	A	B

Summary Information (see also Sequences/Alignments below)

Ligands, Modified Residues, Ions (2, 4)

Asymmetric Unit (2, 4)

No.	Name	Count	Type	Full Name
1	FES	2	Ligand/Ion	FE2/S2 (INORGANIC) CLUSTER
2	ZN	2	Ligand/Ion	ZINC ION

Biological Unit 1 (1, 2)

No.	Name	Count	Type	Full Name
1	FES	2	Ligand/Ion	FE2/S2 (INORGANIC) CLUSTER
2	ZN	-1	Ligand/Ion	ZINC ION

Biological Unit 2 (1, 4)

No.	Name	Count	Type	Full Name
1	FES	4	Ligand/Ion	FE2/S2 (INORGANIC) CLUSTER
2	ZN	-1	Ligand/Ion	ZINC ION

Sites (4, 4)

Asymmetric Unit (4, 4)

No.	Name	Evidence	Residues	Description
1	AC1	SOFTWARE	CYS A:74 , ARG A:75 , CYS A:76 , SER A:79 , CYS A:85 , ASP A:86 , SER A:88 , HIS A:89	BINDING SITE FOR RESIDUE FES A 500
2	AC2	SOFTWARE	HOH A:11 , HIS A:89 , GLU B:49 , LYS B:56 , HOH B:149	BINDING SITE FOR RESIDUE ZN A 501
3	AC3	SOFTWARE	LYS A:56 , HIS B:89 , HOH B:139 , HOH B:153	BINDING SITE FOR RESIDUE ZN B 501
4	AC4	SOFTWARE	CYS B:74 , ARG B:75 , CYS B:76 , SER B:79 , CYS B:85 , ASP B:86 , GLY B:87 , SER B:88 , HIS B:89	BINDING SITE FOR RESIDUE FES B 500

SS Bonds (0, 0)

Cis Peptide Bonds (2, 2)

Sequence-Structure Mapping

SAPs(SNPs)/Variants (0, 0)

PROSITE Motifs (0, 0)

Exons (0, 0)

Sequences/Alignments

Asymmetric Unit

Reformat:	Number of residues per line = ('0' or empty: single-line sequence representation)
	Number of residues per labelling interval =
	UniProt sequence: complete aligned part

Show mapping:	SCOP domains	CATH domains	Pfam domains	Secondary structure (by author)
	SAPs(SNPs)	PROSITE motifs	Exons
	(details for a mapped element are shown in a popup box when the mouse pointer rests over it)

Chain A from PDB  Type:PROTEIN  Length:65
 aligned with NEET_ARATH | Q9FLI7 from UniProtKB/Swiss-Prot  Length:108

    Alignment length:65
                                    53        63        73        83        93       103     
           NEET_ARATH    44 GGINPEIRKNEDKVVDSVVVTELSKNITPYCRCWRSGTFPLCDGSHVKHNKANGDNVGPLLLKKQ 108
               SCOP domains ----------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------- Pfam domains
         Sec.struct. author .............eeeeee.hhh...eeee..............hhhhhhhhhh..eeeeeee.. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------- Transcript
                 3s2q A  44 GGINPEIRKNEDKVVDSVVVTELSKNITPYCRCWRSGTFPLCDGSHVKHNKANGDNVGPLLLKKQ 108
                                    53        63        73        83        93       103

Chain B from PDB  Type:PROTEIN  Length:65
 aligned with NEET_ARATH | Q9FLI7 from UniProtKB/Swiss-Prot  Length:108

    Alignment length:65
                                    53        63        73        83        93       103     
           NEET_ARATH    44 GGINPEIRKNEDKVVDSVVVTELSKNITPYCRCWRSGTFPLCDGSHVKHNKANGDNVGPLLLKKQ 108
               SCOP domains ----------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------- Pfam domains
         Sec.struct. author .............eeeeee.hhh...eeee..............hhhhhhhhhh..eeeeeee.. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------- Transcript
                 3s2q B  44 GGINPEIRKNEDKVVDSVVVTELSKNITPYCRCWRSGTFPLCDGSHVKHNKANGDNVGPLLLKKQ 108
                                    53        63        73        83        93       103

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	x	→ Chemical Group	(purple background, 'x', labelled with number + name, e.g. ACE or NH2)
	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '\|'

Classification and Annotation

SCOP Domains (0, 0)

CATH Domains (0, 0)

Pfam Domains (0, 0)

Gene Ontology (11, 11)

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	Cis Peptide Bonds
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