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(-) Description

Title :  CRYSTAL STRUCTURE OF CIRCULAR PERMUTATED RED FLUORESCENT PROTEIN MKATE(CP 154-153)
 
Authors :  Q. Wang, H. Sondermann
Date :  09 May 11  (Deposition) - 15 Jun 11  (Release) - 21 Jun 17  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  3.00
Chains :  Asym. Unit :  A,B,C,D,E,F,G,H
Biol. Unit 1:  A,B,F,G  (1x)
Biol. Unit 2:  C,D,E,H  (1x)
Keywords :  Gfp-Like Fluorescent Protein, Mkate, Circular Permutated, Red Fluorescentprotein, Fluorescent Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  B. Shui, Q. Wang, F. Lee, L. J. Byrnes, D. M. Chudakov, S. A. Lukyanov, H. Sondermann, M. I. Kotlikoff
Circular Permutation Of Red Fluorescent Proteins.
Plos One V. 6 20505 2011
PubMed-ID: 21647365  |  Reference-DOI: 10.1371/JOURNAL.PONE.0020505

(-) Compounds

Molecule 1 - FLUORESCENT PROTEIN FP480,FLUORESCENT PROTEIN FP480
    Chains: F, A, B, C, D, E, G, H
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Taxid: 562
    Mutation: YES
    Organism Common: BUBBLE-TIP ANEMONE
    Organism Scientific: ENTACMAEA QUADRICOLOR
    Organism Taxid: 6118
    Other Details: CIRCULAR PERMUTATED MKATE (CP154-153)

 Structural Features

(-) Chains, Units

  12345678
Asymmetric Unit : ABCDEFGH
Biological Unit 1 (1x): AB   FG 
Biological Unit 2 (1x):   CDE  H

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (2, 9)

Asymmetric Unit (2, 9)
No.NameCountTypeFull Name
1MG1Ligand/IonMAGNESIUM ION
2NRQ8Mod. Amino Acid{(4Z)-4-(4-HYDROXYBENZYLIDENE)-2-[3-(METHYLTHIO)PROPANIMIDOYL]-5-OXO-4,5-DIHYDRO-1H-IMIDAZOL-1-YL}ACETIC ACID
Biological Unit 1 (1, 4)
No.NameCountTypeFull Name
1MG-1Ligand/IonMAGNESIUM ION
2NRQ4Mod. Amino Acid{(4Z)-4-(4-HYDROXYBENZYLIDENE)-2-[3-(METHYLTHIO)PROPANIMIDOYL]-5-OXO-4,5-DIHYDRO-1H-IMIDAZOL-1-YL}ACETIC ACID
Biological Unit 2 (1, 4)
No.NameCountTypeFull Name
1MG-1Ligand/IonMAGNESIUM ION
2NRQ4Mod. Amino Acid{(4Z)-4-(4-HYDROXYBENZYLIDENE)-2-[3-(METHYLTHIO)PROPANIMIDOYL]-5-OXO-4,5-DIHYDRO-1H-IMIDAZOL-1-YL}ACETIC ACID

(-) Sites  (1, 1)

Asymmetric Unit (1, 1)
No.NameEvidenceResiduesDescription
1AC1SOFTWARETHR A:229 , THR G:229BINDING SITE FOR RESIDUE MG A 237

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 3RWT)

(-) Cis Peptide Bonds  (23, 23)

Asymmetric Unit
No.Residues
1Gly F:80 -Gly F:81
2Gly F:134 -Pro F:135
3Phe F:169 -Pro F:170
4Gly A:80 -Gly A:81
5Gly A:134 -Pro A:135
6Phe A:169 -Pro A:170
7Gly B:80 -Gly B:81
8Gly B:134 -Pro B:135
9Phe B:169 -Pro B:170
10Gly C:80 -Gly C:81
11Gly C:134 -Pro C:135
12Phe C:169 -Pro C:170
13Gly D:80 -Gly D:81
14Gly D:134 -Pro D:135
15Phe D:169 -Pro D:170
16Gly E:80 -Gly E:81
17Gly E:134 -Pro E:135
18Phe E:169 -Pro E:170
19Gly G:134 -Pro G:135
20Phe G:169 -Pro G:170
21Gly H:80 -Gly H:81
22Gly H:134 -Pro H:135
23Phe H:169 -Pro H:170

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 3RWT)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 3RWT)

(-) Exons   (0, 0)

(no "Exon" information available for 3RWT)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:235
 aligned with D0VX33_ENTQU | D0VX33 from UniProtKB/TrEMBL  Length:233

    Alignment length:237
                                                                                                                  1                                                                                                                                                      
                                     -         -         -         -         -         -         -         -      |  4        14        24        34        44        54        64        74        84        94       104       114       124       134       144       
         D0VX33_ENTQU     - --------------------------------------------------------------------------------------MSELITENMHMKLYMEGTVNNHHFKCTSEGEGKPYEGTQTQRIKVVEGGPLPFAFDILATSFMYGSHTFINHTQGIPDFWKQSFPEGFTWERVTTYEDGGVLTATQDTSLQDGCLIYNVKIRGVNFPSNGPVMQKKTLGWEAHTEMLYPAD 151
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeeeeeeeee....eeeeeeeeeeee..hhhhh.....eeeeeeeeeeeee....eeeeeeeeeee.........................eeeeeeeeeee..eeeeeeeeeeee....eeeeeeeeee......hhhhhhhhh.--hhhhhee.....hhhhhh....eeeeeeeee....eeeeeeeeeee..eeeeeeeeeee.....hhhhhh.eeee..eeeeeeee. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3rwt A   0 EFLEGRSDMALKLVGGGHLICNLKTTYRSKKPAKNLKMPGVYYVDRRLERIKEADKETYVEQHEVAVARYCDLPSKLGHKGGTGGSMSELITENMHMKLYMEGTVNNHHFKCTSEGEGKPYEGTQTMRIKVVEGGPLPFAFDILATSFg--SKTFINHTQGIPDFFKQSFPEGFTWERVTTYEDGGVLTATQDTSLQDGCLIYNVKIRGVNFPSNGPVMQKKTLGWEASTEMLYPAD 236
                                     9        19        29        39        49        59        69        79        89        99       109       119       129       139        |- |     159       169       179       189       199       209       219       229       
                                                                                                                                                                              148-NRQ                                                                                    
                                                                                                                                                                                 151                                                                                     


Chain B from PDB  Type:PROTEIN  Length:235
 aligned with D0VX33_ENTQU | D0VX33 from UniProtKB/TrEMBL  Length:233

    Alignment length:237
                                                                                                                  1                                                                                                                                                      
                                     -         -         -         -         -         -         -         -      |  4        14        24        34        44        54        64        74        84        94       104       114       124       134       144       
         D0VX33_ENTQU     - --------------------------------------------------------------------------------------MSELITENMHMKLYMEGTVNNHHFKCTSEGEGKPYEGTQTQRIKVVEGGPLPFAFDILATSFMYGSHTFINHTQGIPDFWKQSFPEGFTWERVTTYEDGGVLTATQDTSLQDGCLIYNVKIRGVNFPSNGPVMQKKTLGWEAHTEMLYPAD 151
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeeeeeeeee....eeeeeeeeeeee..hhhhh.....eeeeeeeeeeeee....eeeeeeeeeee.........................eeeeeeeeeee..eeeeeeeeeeee....eeeeeeeeee......hhhhhhhhh.--hhhhhee.....hhhhhh....eeeeeeeee....eeeeeee..ee..eeeeeeeeeee.....hhhhhh.eeee..eeeeeeee. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3rwt B   0 EFLEGRSDMALKLVGGGHLICNLKTTYRSKKPAKNLKMPGVYYVDRRLERIKEADKETYVEQHEVAVARYCDLPSKLGHKGGTGGSMSELITENMHMKLYMEGTVNNHHFKCTSEGEGKPYEGTQTMRIKVVEGGPLPFAFDILATSFg--SKTFINHTQGIPDFFKQSFPEGFTWERVTTYEDGGVLTATQDTSLQDGCLIYNVKIRGVNFPSNGPVMQKKTLGWEASTEMLYPAD 236
                                     9        19        29        39        49        59        69        79        89        99       109       119       129       139        |- |     159       169       179       189       199       209       219       229       
                                                                                                                                                                              148-NRQ                                                                                    
                                                                                                                                                                                 151                                                                                     


Chain C from PDB  Type:PROTEIN  Length:235
 aligned with D0VX33_ENTQU | D0VX33 from UniProtKB/TrEMBL  Length:233

    Alignment length:237
                                                                                                                  1                                                                                                                                                      
                                     -         -         -         -         -         -         -         -      |  4        14        24        34        44        54        64        74        84        94       104       114       124       134       144       
         D0VX33_ENTQU     - --------------------------------------------------------------------------------------MSELITENMHMKLYMEGTVNNHHFKCTSEGEGKPYEGTQTQRIKVVEGGPLPFAFDILATSFMYGSHTFINHTQGIPDFWKQSFPEGFTWERVTTYEDGGVLTATQDTSLQDGCLIYNVKIRGVNFPSNGPVMQKKTLGWEAHTEMLYPAD 151
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeeeeeeeee....eeeeeeeeeeee..hhhhh.....eeeeeeeeeeeee....eeeeeeeeeee.........................eeeeeeeeeee..eeeeeeeeeeee....eeeeeeeeee......hhhhhhhhh.--hhhhhee.....hhhhhh....eeeeeeeee....eeeeeee..ee..eeeeeeeeeee.....hhhhhh.eeee..eeeeeeee. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3rwt C   0 EFLEGRSDMALKLVGGGHLICNLKTTYRSKKPAKNLKMPGVYYVDRRLERIKEADKETYVEQHEVAVARYCDLPSKLGHKGGTGGSMSELITENMHMKLYMEGTVNNHHFKCTSEGEGKPYEGTQTMRIKVVEGGPLPFAFDILATSFg--SKTFINHTQGIPDFFKQSFPEGFTWERVTTYEDGGVLTATQDTSLQDGCLIYNVKIRGVNFPSNGPVMQKKTLGWEASTEMLYPAD 236
                                     9        19        29        39        49        59        69        79        89        99       109       119       129       139        |- |     159       169       179       189       199       209       219       229       
                                                                                                                                                                              148-NRQ                                                                                    
                                                                                                                                                                                 151                                                                                     


Chain D from PDB  Type:PROTEIN  Length:235
 aligned with D0VX33_ENTQU | D0VX33 from UniProtKB/TrEMBL  Length:233

    Alignment length:237
                                                                                                                  1                                                                                                                                                      
                                     -         -         -         -         -         -         -         -      |  4        14        24        34        44        54        64        74        84        94       104       114       124       134       144       
         D0VX33_ENTQU     - --------------------------------------------------------------------------------------MSELITENMHMKLYMEGTVNNHHFKCTSEGEGKPYEGTQTQRIKVVEGGPLPFAFDILATSFMYGSHTFINHTQGIPDFWKQSFPEGFTWERVTTYEDGGVLTATQDTSLQDGCLIYNVKIRGVNFPSNGPVMQKKTLGWEAHTEMLYPAD 151
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeeeeeeeee....eeeeeeeeeeee..hhhhh.....eeeeeeeeeeeee....eeeeeeeeeee.........................eeeeeeeeeee..eeeeeeeeeeee....eeeeeeeeee......hhhhhhhhh.--hhhhhee.....hhhhhh....eeeeeeeee....eeeeeeeeeee..eeeeeeeeeee.....hhhhhh.eeee..eeeeeeee. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3rwt D   0 EFLEGRSDMALKLVGGGHLICNLKTTYRSKKPAKNLKMPGVYYVDRRLERIKEADKETYVEQHEVAVARYCDLPSKLGHKGGTGGSMSELITENMHMKLYMEGTVNNHHFKCTSEGEGKPYEGTQTMRIKVVEGGPLPFAFDILATSFg--SKTFINHTQGIPDFFKQSFPEGFTWERVTTYEDGGVLTATQDTSLQDGCLIYNVKIRGVNFPSNGPVMQKKTLGWEASTEMLYPAD 236
                                     9        19        29        39        49        59        69        79        89        99       109       119       129       139        |- |     159       169       179       189       199       209       219       229       
                                                                                                                                                                              148-NRQ                                                                                    
                                                                                                                                                                                 151                                                                                     


Chain E from PDB  Type:PROTEIN  Length:235
 aligned with D0VX33_ENTQU | D0VX33 from UniProtKB/TrEMBL  Length:233

    Alignment length:237
                                                                                                                  1                                                                                                                                                      
                                     -         -         -         -         -         -         -         -      |  4        14        24        34        44        54        64        74        84        94       104       114       124       134       144       
         D0VX33_ENTQU     - --------------------------------------------------------------------------------------MSELITENMHMKLYMEGTVNNHHFKCTSEGEGKPYEGTQTQRIKVVEGGPLPFAFDILATSFMYGSHTFINHTQGIPDFWKQSFPEGFTWERVTTYEDGGVLTATQDTSLQDGCLIYNVKIRGVNFPSNGPVMQKKTLGWEAHTEMLYPAD 151
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeeeeeeeee....eeeeeeeeeeee..hhhhh.....eeeeeeeeeeeee....eeeeeeeeeee.........................eeeeeeeeeee..eeeeeeeeeeee....eeeeeeeeee.......hhhhhhhh.--hhhhhee.....hhhhhh....eeeeeeeee....eeeeeee..ee..eeeeeeeeeee.....hhhhhh.eeee..eeeeeeee. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3rwt E   0 EFLEGRSDMALKLVGGGHLICNLKTTYRSKKPAKNLKMPGVYYVDRRLERIKEADKETYVEQHEVAVARYCDLPSKLGHKGGTGGSMSELITENMHMKLYMEGTVNNHHFKCTSEGEGKPYEGTQTMRIKVVEGGPLPFAFDILATSFg--SKTFINHTQGIPDFFKQSFPEGFTWERVTTYEDGGVLTATQDTSLQDGCLIYNVKIRGVNFPSNGPVMQKKTLGWEASTEMLYPAD 236
                                     9        19        29        39        49        59        69        79        89        99       109       119       129       139        |- |     159       169       179       189       199       209       219       229       
                                                                                                                                                                              148-NRQ                                                                                    
                                                                                                                                                                                 151                                                                                     


Chain F from PDB  Type:PROTEIN  Length:235
 aligned with D0VX33_ENTQU | D0VX33 from UniProtKB/TrEMBL  Length:233

    Alignment length:237
                                                                                                                  1                                                                                                                                                      
                                     -         -         -         -         -         -         -         -      |  4        14        24        34        44        54        64        74        84        94       104       114       124       134       144       
         D0VX33_ENTQU     - --------------------------------------------------------------------------------------MSELITENMHMKLYMEGTVNNHHFKCTSEGEGKPYEGTQTQRIKVVEGGPLPFAFDILATSFMYGSHTFINHTQGIPDFWKQSFPEGFTWERVTTYEDGGVLTATQDTSLQDGCLIYNVKIRGVNFPSNGPVMQKKTLGWEAHTEMLYPAD 151
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeeeeeeeee....eeeeeeeeeeee..hhhhh.....eeeeeeeeeeeee....eeeeeeeeeee.........................eeeeeeeeeee..eeeeeeeeeeee....eeeeeeeeee......hhhhhhhhh.--hhh.eee.....hhhhhh....eeeeeeeee....eeeeeee..ee..eeeeeeeeeee.....hhhhhh.eeee..eeeeeeee. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3rwt F   0 EFLEGRSDMALKLVGGGHLICNLKTTYRSKKPAKNLKMPGVYYVDRRLERIKEADKETYVEQHEVAVARYCDLPSKLGHKGGTGGSMSELITENMHMKLYMEGTVNNHHFKCTSEGEGKPYEGTQTMRIKVVEGGPLPFAFDILATSFg--SKTFINHTQGIPDFFKQSFPEGFTWERVTTYEDGGVLTATQDTSLQDGCLIYNVKIRGVNFPSNGPVMQKKTLGWEASTEMLYPAD 236
                                     9        19        29        39        49        59        69        79        89        99       109       119       129       139        |- |     159       169       179       189       199       209       219       229       
                                                                                                                                                                              148-NRQ                                                                                    
                                                                                                                                                                                 151                                                                                     


Chain G from PDB  Type:PROTEIN  Length:235
 aligned with D0VX33_ENTQU | D0VX33 from UniProtKB/TrEMBL  Length:233

    Alignment length:237
                                                                                                                  1                                                                                                                                                      
                                     -         -         -         -         -         -         -         -      |  4        14        24        34        44        54        64        74        84        94       104       114       124       134       144       
         D0VX33_ENTQU     - --------------------------------------------------------------------------------------MSELITENMHMKLYMEGTVNNHHFKCTSEGEGKPYEGTQTQRIKVVEGGPLPFAFDILATSFMYGSHTFINHTQGIPDFWKQSFPEGFTWERVTTYEDGGVLTATQDTSLQDGCLIYNVKIRGVNFPSNGPVMQKKTLGWEAHTEMLYPAD 151
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeeeeeeeee....eeeeeeeeeeee..hhhhh.....eeeeeeeeeeeee....eeeeeeeeeee.........................eeeeeeeeeee..eeeeeeeeeeee....eeeeeeeeee.......hhhhhh...--....eee.....hhhhhh....eeeeeeeee....eeeeeeeeeee..eeeeeeeeeee.....hhhhhh.eeee..eeeeeeee. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3rwt G   0 EFLEGRSDMALKLVGGGHLICNLKTTYRSKKPAKNLKMPGVYYVDRRLERIKEADKETYVEQHEVAVARYCDLPSKLGHKGGTGGSMSELITENMHMKLYMEGTVNNHHFKCTSEGEGKPYEGTQTMRIKVVEGGPLPFAFDILATSFg--SKTFINHTQGIPDFFKQSFPEGFTWERVTTYEDGGVLTATQDTSLQDGCLIYNVKIRGVNFPSNGPVMQKKTLGWEASTEMLYPAD 236
                                     9        19        29        39        49        59        69        79        89        99       109       119       129       139        |- |     159       169       179       189       199       209       219       229       
                                                                                                                                                                              148-NRQ                                                                                    
                                                                                                                                                                                 151                                                                                     


Chain H from PDB  Type:PROTEIN  Length:235
 aligned with D0VX33_ENTQU | D0VX33 from UniProtKB/TrEMBL  Length:233

    Alignment length:237
                                                                                                                  1                                                                                                                                                      
                                     -         -         -         -         -         -         -         -      |  4        14        24        34        44        54        64        74        84        94       104       114       124       134       144       
         D0VX33_ENTQU     - --------------------------------------------------------------------------------------MSELITENMHMKLYMEGTVNNHHFKCTSEGEGKPYEGTQTQRIKVVEGGPLPFAFDILATSFMYGSHTFINHTQGIPDFWKQSFPEGFTWERVTTYEDGGVLTATQDTSLQDGCLIYNVKIRGVNFPSNGPVMQKKTLGWEAHTEMLYPAD 151
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
           Pfam domains (1) ---------------------------------------------------------------------------------------GFP-3rwtH01 H:87-236                                                                                                                                   Pfam domains (1)
           Pfam domains (2) ---------------------------------------------------------------------------------------GFP-3rwtH02 H:87-236                                                                                                                                   Pfam domains (2)
           Pfam domains (3) ---------------------------------------------------------------------------------------GFP-3rwtH03 H:87-236                                                                                                                                   Pfam domains (3)
           Pfam domains (4) ---------------------------------------------------------------------------------------GFP-3rwtH04 H:87-236                                                                                                                                   Pfam domains (4)
           Pfam domains (5) ---------------------------------------------------------------------------------------GFP-3rwtH05 H:87-236                                                                                                                                   Pfam domains (5)
           Pfam domains (6) ---------------------------------------------------------------------------------------GFP-3rwtH06 H:87-236                                                                                                                                   Pfam domains (6)
           Pfam domains (7) ---------------------------------------------------------------------------------------GFP-3rwtH07 H:87-236                                                                                                                                   Pfam domains (7)
           Pfam domains (8) ---------------------------------------------------------------------------------------GFP-3rwtH08 H:87-236                                                                                                                                   Pfam domains (8)
         Sec.struct. author .eeeeeeeeeeee....eeeeeeeeeeee..hhhhh.....eeeeeeeeeeeee....eeeeeeeeeee.........................eeeeeeeeeee..eeeeeeeeeeee....eeeeeeeeee.......hhhhhh...--....eee.....hhhhhhh...eeeeeeeee....eeeeeeeeeee..eeeeeeeeeee.....hhhhhh.eeee..eeeeeeee. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3rwt H   0 EFLEGRSDMALKLVGGGHLICNLKTTYRSKKPAKNLKMPGVYYVDRRLERIKEADKETYVEQHEVAVARYCDLPSKLGHKGGTGGSMSELITENMHMKLYMEGTVNNHHFKCTSEGEGKPYEGTQTMRIKVVEGGPLPFAFDILATSFg--SKTFINHTQGIPDFFKQSFPEGFTWERVTTYEDGGVLTATQDTSLQDGCLIYNVKIRGVNFPSNGPVMQKKTLGWEASTEMLYPAD 236
                                     9        19        29        39        49        59        69        79        89        99       109       119       129       139        |- |     159       169       179       189       199       209       219       229       
                                                                                                                                                                              148-NRQ                                                                                    
                                                                                                                                                                                 151
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 3RWT)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 3RWT)

(-) Pfam Domains  (1, 8)

Asymmetric Unit
(-)
Clan: GFP (101)

(-) Gene Ontology  (1, 1)

Asymmetric Unit(hide GO term definitions)
Chain A,B,C,D,E,F,G,H   (D0VX33_ENTQU | D0VX33)
biological process
    GO:0008218    bioluminescence    The production of light by certain enzyme-catalyzed reactions in cells.

 Visualization

(-) Interactive Views

Asymmetric Unit
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  Ligands, Modified Residues, Ions
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  Cis Peptide Bonds
    Gly A:134 - Pro A:135   [ RasMol ]  
    Gly A:80 - Gly A:81   [ RasMol ]  
    Gly B:134 - Pro B:135   [ RasMol ]  
    Gly B:80 - Gly B:81   [ RasMol ]  
    Gly C:134 - Pro C:135   [ RasMol ]  
    Gly C:80 - Gly C:81   [ RasMol ]  
    Gly D:134 - Pro D:135   [ RasMol ]  
    Gly D:80 - Gly D:81   [ RasMol ]  
    Gly E:134 - Pro E:135   [ RasMol ]  
    Gly E:80 - Gly E:81   [ RasMol ]  
    Gly F:134 - Pro F:135   [ RasMol ]  
    Gly F:80 - Gly F:81   [ RasMol ]  
    Gly G:134 - Pro G:135   [ RasMol ]  
    Gly H:134 - Pro H:135   [ RasMol ]  
    Gly H:80 - Gly H:81   [ RasMol ]  
    Phe A:169 - Pro A:170   [ RasMol ]  
    Phe B:169 - Pro B:170   [ RasMol ]  
    Phe C:169 - Pro C:170   [ RasMol ]  
    Phe D:169 - Pro D:170   [ RasMol ]  
    Phe E:169 - Pro E:170   [ RasMol ]  
    Phe F:169 - Pro F:170   [ RasMol ]  
    Phe G:169 - Pro G:170   [ RasMol ]  
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        D0VX33_ENTQU | D0VX33: 3h1o 3h1r 3rwa 3t6h 4kpi 4nws 4oj0 4oqw

(-) Related Entries Specified in the PDB File

3rwa