Chain A from PDB Type:PROTEIN Length:212
aligned with TSAB_VIBPA | Q87RD1 from UniProtKB/Swiss-Prot Length:233
Alignment length:212
12 22 32 42 52 62 72 82 92 102 112 122 132 142 152 162 172 182 192 202 212
TSAB_VIBPA 3 AKILAIDTATENCSVALLVNDQVISRSEVAPRDHTKKVLPMVDEVLKEAGLTLQDLDALAFGRGPGSFTGVRIGIGIAQGLAFGAELPMIGVSTLAAMAQASYRLHGATDVAVAIDARMSEVYWARYSRQENGEWIGVDEECVIPPARLAEEAQADSKTWTTAGTGWSAYQEELAGLPFNTADSEVLYPDSQDIVILAKQELEKGNTVPVEE 214
SCOP domains d3r6ma1 A:2-108 automated matches d3r6ma2 A:109-213 automated matches SCOP domains
CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ..eeeee....eeeeeee....eeeeeee....hhhhhhhhhhhhhhh.........eeeeeee..hhhhhhhhhhhhhhhhhhh...eeeeehhhhhhhhhhhhhh..eeeeee......eeeeeeee.....eeeeeeeeeehhhhhhhh......eeeee......hhhhhh....eee.......hhhhhhhhhhhhhh......... Sec.struct. author
SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
3r6m A 2 AKILAIDTATENCSVALLVNDQVISRSEVAPRDHTKKVLPMVDEVLKEAGLTLQDLDALAFGRGPGSFTGVRIGIGIAQGLAFGAELPMIGVSTLAAMAQASYRLHGATDVAVAIDARMSEVYWARYSRQENGEWIGVDEECVIPPARLAEEAQADSKTWTTAGTGWSAYQEELAGLPFNTADSEVLYPDSQDIVILAKQELEKGNTVPVEE 213
11 21 31 41 51 61 71 81 91 101 111 121 131 141 151 161 171 181 191 201 211
Chain B from PDB Type:PROTEIN Length:212
aligned with TSAB_VIBPA | Q87RD1 from UniProtKB/Swiss-Prot Length:233
Alignment length:212
12 22 32 42 52 62 72 82 92 102 112 122 132 142 152 162 172 182 192 202 212
TSAB_VIBPA 3 AKILAIDTATENCSVALLVNDQVISRSEVAPRDHTKKVLPMVDEVLKEAGLTLQDLDALAFGRGPGSFTGVRIGIGIAQGLAFGAELPMIGVSTLAAMAQASYRLHGATDVAVAIDARMSEVYWARYSRQENGEWIGVDEECVIPPARLAEEAQADSKTWTTAGTGWSAYQEELAGLPFNTADSEVLYPDSQDIVILAKQELEKGNTVPVEE 214
SCOP domains d3r6mb1 B:2-108 automated matches d3r6mb2 B:109-213 automated matches SCOP domains
CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ..eeeee....eeeeeee....eeeeeee....hhhhhhhhhhhhhhh.........eeeeeee..hhhhhhhhhhhhhhhhhhh...eeeeehhhhhhhhhhhhhh..eeeeee......eeeeeeee.....eeeeeeeeeehhhhhhhh......eeeee......hhhhhh....eee.......hhhhhhhhhhhhhh......... Sec.struct. author
SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
3r6m B 2 AKILAIDTATENCSVALLVNDQVISRSEVAPRDHTKKVLPMVDEVLKEAGLTLQDLDALAFGRGPGSFTGVRIGIGIAQGLAFGAELPMIGVSTLAAMAQASYRLHGATDVAVAIDARMSEVYWARYSRQENGEWIGVDEECVIPPARLAEEAQADSKTWTTAGTGWSAYQEELAGLPFNTADSEVLYPDSQDIVILAKQELEKGNTVPVEE 213
11 21 31 41 51 61 71 81 91 101 111 121 131 141 151 161 171 181 191 201 211
Chain C from PDB Type:PROTEIN Length:212
aligned with TSAB_VIBPA | Q87RD1 from UniProtKB/Swiss-Prot Length:233
Alignment length:212
12 22 32 42 52 62 72 82 92 102 112 122 132 142 152 162 172 182 192 202 212
TSAB_VIBPA 3 AKILAIDTATENCSVALLVNDQVISRSEVAPRDHTKKVLPMVDEVLKEAGLTLQDLDALAFGRGPGSFTGVRIGIGIAQGLAFGAELPMIGVSTLAAMAQASYRLHGATDVAVAIDARMSEVYWARYSRQENGEWIGVDEECVIPPARLAEEAQADSKTWTTAGTGWSAYQEELAGLPFNTADSEVLYPDSQDIVILAKQELEKGNTVPVEE 214
SCOP domains d3r6mc1 C:2-108 automated matches d3r6mc2 C:109-213 automated matches SCOP domains
CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .eeeeee....eeeeeeee...eeeeeee....hhhhhhhhhhhhhhh.........eeeeeee..hhhhhhhhhhhhhhhhhhh...eeeeehhhhhhhhhhhhhh..eeeeeee.....eeeeeeee.....eeeeeeeeeehhhhhhhh......eeeee.hhhhhhhhhhh....eee.......hhhhhhhhhhhhhh......... Sec.struct. author
SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
3r6m C 2 AKILAIDTATENCSVALLVNDQVISRSEVAPRDHTKKVLPMVDEVLKEAGLTLQDLDALAFGRGPGSFTGVRIGIGIAQGLAFGAELPMIGVSTLAAMAQASYRLHGATDVAVAIDARMSEVYWARYSRQENGEWIGVDEECVIPPARLAEEAQADSKTWTTAGTGWSAYQEELAGLPFNTADSEVLYPDSQDIVILAKQELEKGNTVPVEE 213
11 21 31 41 51 61 71 81 91 101 111 121 131 141 151 161 171 181 191 201 211
Chain D from PDB Type:PROTEIN Length:212
aligned with TSAB_VIBPA | Q87RD1 from UniProtKB/Swiss-Prot Length:233
Alignment length:212
12 22 32 42 52 62 72 82 92 102 112 122 132 142 152 162 172 182 192 202 212
TSAB_VIBPA 3 AKILAIDTATENCSVALLVNDQVISRSEVAPRDHTKKVLPMVDEVLKEAGLTLQDLDALAFGRGPGSFTGVRIGIGIAQGLAFGAELPMIGVSTLAAMAQASYRLHGATDVAVAIDARMSEVYWARYSRQENGEWIGVDEECVIPPARLAEEAQADSKTWTTAGTGWSAYQEELAGLPFNTADSEVLYPDSQDIVILAKQELEKGNTVPVEE 214
SCOP domains d3r6md1 D:2-108 automated matches d3r6md2 D:109-213 automated matches SCOP domains
CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .eeeeee....eeeeeeee...eeeeeee....hhhhhhhhhhhhhhh.........eeeeeee..hhhhhhhhhhhhhhhhhhh...eeeeehhhhhhhhhhhhhh..eeeeeee.....eeeeeeee.....eeeeeeeeeehhhhhhhh......eeeee.hhhhhhhhhhh....eee.......hhhhhhhhhhhhhh......... Sec.struct. author
SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
3r6m D 2 AKILAIDTATENCSVALLVNDQVISRSEVAPRDHTKKVLPMVDEVLKEAGLTLQDLDALAFGRGPGSFTGVRIGIGIAQGLAFGAELPMIGVSTLAAMAQASYRLHGATDVAVAIDARMSEVYWARYSRQENGEWIGVDEECVIPPARLAEEAQADSKTWTTAGTGWSAYQEELAGLPFNTADSEVLYPDSQDIVILAKQELEKGNTVPVEE 213
11 21 31 41 51 61 71 81 91 101 111 121 131 141 151 161 171 181 191 201 211
| Legend: |
|
→ Mismatch |
(orange background) |
| |
- |
→ Gap |
(green background, '-', border residues have a numbering label) |
| |
|
→ Modified Residue |
(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name) |
| |
x |
→ Chemical Group |
(purple background, 'x', labelled with number + name, e.g. ACE or NH2) |
| |
extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|' |
Description
