3R3S - JenaLib

Asym./Biol. Unit (Jmol Viewer)

Asym./Biol. Unit - sites (Jmol Viewer)

Title :   STRUCTURE OF THE YGHA OXIDOREDUCTASE FROM SALMONELLA ENTERICA

Authors :   S. M. Anderson, Z. Wawrzak, O. Onopriyenko, S. N. Peterson, W. F. Anders A. Savchenko, Center For Structural Genomics Of Infectious Di (Csgid)

Date :   16 Mar 11 (Deposition) - 30 Mar 11 (Release) - 30 Mar 11 (Revision)

Method :   X-RAY DIFFRACTION

Resolution :   1.25

Chains :   Asym./Biol. Unit : A,B,C,D

Keywords :   Structural Genomics, Csgid, Center For Structural Genomics Of Infectious Diseases, 3-Layer(Aba) Sandwich, Rossmann Fold, Nad(P)- Binding Rossmann-Like Domain, Oxidoreductase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   S. M. Anderson, Z. Wawrzak, O. Onopriyenko, S. N. Peterson, W. F. Anderson, A. Savchenko, Center For Structural Genomics Of Infectious Diseases (Csgid)
Structure Of The Ygha Oxidoreductase From Salmonella Enterica
To Be Published
PubMed: search

Molecule 1 - OXIDOREDUCTASE
	Chains	:	A, B, C, D
	Engineered	:	YES
	Expression System	:	ESCHERICHIA COLI
	Expression System Strain	:	BL21-CODONPLUS(DE3)-RIPL
	Expression System Taxid	:	469008
	Gene	:	YGHA, STM3157
	Organism Scientific	:	SALMONELLA ENTERICA SUBSP. ENTERICA SEROVAR TYPHIMURIUM
	Organism Taxid	:	90371
	Strain	:	LT2

		1	2	3	4
Asymmetric/Biological Unit	:	A	B	C	D

Summary Information (see also Sequences/Alignments below)

Asymmetric/Biological Unit (4, 13)

No.	Name	Count	Type	Full Name
1	FMT	4	Ligand/Ion	FORMIC ACID
2	MG	4	Ligand/Ion	MAGNESIUM ION
3	NAD	4	Ligand/Ion	NICOTINAMIDE-ADENINE-DINUCLEOTIDE
4	SO4	1	Ligand/Ion	SULFATE ION

Asymmetric Unit (13, 13)

No.	Name	Evidence	Residues	Description
01	AC1	SOFTWARE	ASP A:58 , SER A:59 , GLY A:60 , ILE A:61 , TYR A:80 , LEU A:81 , GLU A:84 , GLY A:107 , ASP A:108 , LEU A:109 , VAL A:135 , ALA A:136 , GLY A:137 , VAL A:159 , SER A:185 , SER A:186 , TYR A:199 , LYS A:203 , PRO A:229 , GLY A:230 , PRO A:231 , ILE A:232 , THR A:234 , LEU A:236 , GLN A:237 , FMT A:295 , MG A:296 , HOH A:297 , HOH A:301 , HOH A:305 , HOH A:319 , HOH A:331 , HOH A:439 , HOH A:1604	BINDING SITE FOR RESIDUE NAD A 300
02	AC2	SOFTWARE	ASP B:58 , SER B:59 , GLY B:60 , ILE B:61 , TYR B:80 , LEU B:81 , GLU B:84 , GLY B:107 , ASP B:108 , LEU B:109 , VAL B:135 , ALA B:136 , GLY B:137 , VAL B:159 , SER B:185 , SER B:186 , TYR B:199 , LYS B:203 , PRO B:229 , GLY B:230 , PRO B:231 , ILE B:232 , THR B:234 , LEU B:236 , GLN B:237 , FMT B:295 , MG B:296 , HOH B:299 , HOH B:315 , HOH B:317 , HOH B:336 , HOH B:344 , HOH B:350	BINDING SITE FOR RESIDUE NAD B 300
03	AC3	SOFTWARE	ASP C:58 , SER C:59 , GLY C:60 , ILE C:61 , TYR C:80 , LEU C:81 , GLU C:84 , GLY C:107 , ASP C:108 , LEU C:109 , VAL C:135 , ALA C:136 , GLY C:137 , VAL C:159 , SER C:185 , SER C:186 , TYR C:199 , LYS C:203 , PRO C:229 , GLY C:230 , PRO C:231 , ILE C:232 , THR C:234 , LEU C:236 , GLN C:237 , FMT C:295 , MG C:296 , HOH C:297 , HOH C:301 , HOH C:311 , HOH C:316 , HOH C:318 , HOH C:323 , HOH C:1570	BINDING SITE FOR RESIDUE NAD C 300
04	AC4	SOFTWARE	ASP D:58 , SER D:59 , GLY D:60 , ILE D:61 , TYR D:80 , LEU D:81 , GLU D:84 , GLY D:107 , ASP D:108 , LEU D:109 , VAL D:135 , ALA D:136 , GLY D:137 , VAL D:159 , SER D:185 , SER D:186 , TYR D:199 , LYS D:203 , PRO D:229 , GLY D:230 , PRO D:231 , ILE D:232 , THR D:234 , LEU D:236 , GLN D:237 , FMT D:295 , MG D:296 , HOH D:297 , HOH D:299 , HOH D:313 , HOH D:320 , HOH D:337 , HOH D:370 , HOH D:888	BINDING SITE FOR RESIDUE NAD D 300
05	AC5	SOFTWARE	GLN A:139 , SER A:186 , TYR A:199 , NAD A:300 , HOH A:405 , HOH A:439	BINDING SITE FOR RESIDUE FMT A 295
06	AC6	SOFTWARE	GLN B:139 , SER B:186 , TYR B:199 , NAD B:300 , HOH B:344 , HOH B:675	BINDING SITE FOR RESIDUE FMT B 295
07	AC7	SOFTWARE	GLN C:139 , SER C:186 , TYR C:199 , NAD C:300 , HOH C:301 , HOH C:399	BINDING SITE FOR RESIDUE FMT C 295
08	AC8	SOFTWARE	SER D:186 , GLN D:188 , TYR D:199 , NAD D:300 , HOH D:370 , HOH D:393	BINDING SITE FOR RESIDUE FMT D 295
09	AC9	SOFTWARE	ASP A:58 , SER A:59 , GLU A:84 , HOH A:297 , HOH A:298 , NAD A:300	BINDING SITE FOR RESIDUE MG A 296
10	BC1	SOFTWARE	ASP B:58 , SER B:59 , GLU B:84 , HOH B:299 , NAD B:300 , HOH B:301	BINDING SITE FOR RESIDUE MG B 296
11	BC2	SOFTWARE	ASP C:58 , SER C:59 , GLU C:84 , HOH C:297 , NAD C:300 , HOH C:303	BINDING SITE FOR RESIDUE MG C 296
12	BC3	SOFTWARE	ASP D:58 , SER D:59 , GLU D:84 , HOH D:297 , HOH D:298 , NAD D:300	BINDING SITE FOR RESIDUE MG D 296
13	BC4	SOFTWARE	GLN B:90 , HOH B:569 , HOH B:769 , HOH B:834	BINDING SITE FOR RESIDUE SO4 B 297

(no "SS Bond" information available for 3R3S)

Asymmetric/Biological Unit

No.	Residues
1	Ala A:23	-	Pro A:24
2	Thr A:31	-	Pro A:32
3	Ala B:23	-	Pro B:24
4	Thr B:31	-	Pro B:32
5	Ala C:23	-	Pro C:24
6	Thr C:31	-	Pro C:32
7	Ala D:23	-	Pro D:24
8	Thr D:31	-	Pro D:32

(no "SAP(SNP)/Variant" information available for 3R3S)

(no "PROSITE Motif" information available for 3R3S)

(no "Exon" information available for 3R3S)

Asymmetric/Biological Unit

Reformat:	Number of residues per line = ('0' or empty: single-line sequence representation)
	Number of residues per labelling interval =
	UniProt sequence: complete aligned part

Show mapping:	SCOP domains	CATH domains	Pfam domains	Secondary structure (by author)
	SAPs(SNPs)	PROSITE motifs	Exons
	(details for a mapped element are shown in a popup box when the mouse pointer rests over it)

Chain A from PDB  Type:PROTEIN  Length:292
 aligned with Q8ZM09_SALTY | Q8ZM09 from UniProtKB/TrEMBL  Length:294

    Alignment length:292
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292  
         Q8ZM09_SALTY     3 HLYDPTTQYYTGEYPKQKQPAPGVQAKMTPVPDCGEKSYVGSGRLKDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECGRKAVLLPGDLSDESFARSLVHKAREALGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKGASIITTSSIQAYQPSPHLLDYAATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGGQTQDKIPQFGQQTPMKRAGQPAELAPVYVYLASQESSYVTAEVHGVCGGEHLG 294
               SCOP domains d3r3sa_ A: automated matches                                                                                                                                                                                                                                                                         SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .......................hhhhh....................eeeee...hhhhhhhhhhhhhh..eeeee.hhhhhhhhhhhhhhhhhh...eee......hhhhhhhhhhhhhhhhh...eeee.........hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh....eeeee.hhhhh.....hhhhhhhhhhhhhhhhhhhhhhhhhh.eeeeeee....hhhhhh...hhhhh.............hhhhhhhhhhhhhhhhhh.....eeee....... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3r3s A   3 HLYDPTTQYYTGEYPKQKQPAPGVQAKMTPVPDCGEKSYVGSGRLKDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECGRKAVLLPGDLSDESFARSLVHKAREALGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKGASIITTSSIQAYQPSPHLLDYAATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGGQTQDKIPQFGQQTPMKRAGQPAELAPVYVYLASQESSYVTAEVHGVCGGEHLG 294
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292

Chain B from PDB  Type:PROTEIN  Length:292
 aligned with Q8ZM09_SALTY | Q8ZM09 from UniProtKB/TrEMBL  Length:294

    Alignment length:292
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292  
         Q8ZM09_SALTY     3 HLYDPTTQYYTGEYPKQKQPAPGVQAKMTPVPDCGEKSYVGSGRLKDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECGRKAVLLPGDLSDESFARSLVHKAREALGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKGASIITTSSIQAYQPSPHLLDYAATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGGQTQDKIPQFGQQTPMKRAGQPAELAPVYVYLASQESSYVTAEVHGVCGGEHLG 294
               SCOP domains d3r3sb_ B: automated matches                                                                                                                                                                                                                                                                         SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .......................hhhhh....................eeeee...hhhhhhhhhhhhhh..eeeee.hhhhhhhhhhhhhhhhhh...eee......hhhhhhhhhhhhhhhhh...eeee.........hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh....eeeee.hhhhh.....hhhhhhhhhhhhhhhhhhhhhhhhhh.eeeeeee....hhhhhh...hhhhh.............hhhhhhhhhhhhhhhhhh.....eeee....... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3r3s B   3 HLYDPTTQYYTGEYPKQKQPAPGVQAKMTPVPDCGEKSYVGSGRLKDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECGRKAVLLPGDLSDESFARSLVHKAREALGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKGASIITTSSIQAYQPSPHLLDYAATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGGQTQDKIPQFGQQTPMKRAGQPAELAPVYVYLASQESSYVTAEVHGVCGGEHLG 294
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292

Chain C from PDB  Type:PROTEIN  Length:292
 aligned with Q8ZM09_SALTY | Q8ZM09 from UniProtKB/TrEMBL  Length:294

    Alignment length:292
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292  
         Q8ZM09_SALTY     3 HLYDPTTQYYTGEYPKQKQPAPGVQAKMTPVPDCGEKSYVGSGRLKDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECGRKAVLLPGDLSDESFARSLVHKAREALGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKGASIITTSSIQAYQPSPHLLDYAATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGGQTQDKIPQFGQQTPMKRAGQPAELAPVYVYLASQESSYVTAEVHGVCGGEHLG 294
               SCOP domains d3r3sc_ C: automated matches                                                                                                                                                                                                                                                                         SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .......................hhhhh....................eeeee...hhhhhhhhhhhhhh..eeeee.hhhhhhhhhhhhhhhhh....eee......hhhhhhhhhhhhhhhhh...eeee.........hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh....eeeee.hhhhh.....hhhhhhhhhhhhhhhhhhhhhhhhhh.eeeeeee....hhhhhh...hhhhh.............hhhhhhhhhhhhhhhhhh.....eeee....... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3r3s C   3 HLYDPTTQYYTGEYPKQKQPAPGVQAKMTPVPDCGEKSYVGSGRLKDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECGRKAVLLPGDLSDESFARSLVHKAREALGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKGASIITTSSIQAYQPSPHLLDYAATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGGQTQDKIPQFGQQTPMKRAGQPAELAPVYVYLASQESSYVTAEVHGVCGGEHLG 294
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292

Chain D from PDB  Type:PROTEIN  Length:292
 aligned with Q8ZM09_SALTY | Q8ZM09 from UniProtKB/TrEMBL  Length:294

    Alignment length:292
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292  
         Q8ZM09_SALTY     3 HLYDPTTQYYTGEYPKQKQPAPGVQAKMTPVPDCGEKSYVGSGRLKDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECGRKAVLLPGDLSDESFARSLVHKAREALGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKGASIITTSSIQAYQPSPHLLDYAATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGGQTQDKIPQFGQQTPMKRAGQPAELAPVYVYLASQESSYVTAEVHGVCGGEHLG 294
               SCOP domains d3r3sd_ D: automated matches                                                                                                                                                                                                                                                                         SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
           Pfam domains (1) ----------------------------------------------------adh_short_C2-3r3sD01 D:55-292                                                                                                                                                                                                                 -- Pfam domains (1)
           Pfam domains (2) ----------------------------------------------------adh_short_C2-3r3sD02 D:55-292                                                                                                                                                                                                                 -- Pfam domains (2)
           Pfam domains (3) ----------------------------------------------------adh_short_C2-3r3sD03 D:55-292                                                                                                                                                                                                                 -- Pfam domains (3)
           Pfam domains (4) ----------------------------------------------------adh_short_C2-3r3sD04 D:55-292                                                                                                                                                                                                                 -- Pfam domains (4)
         Sec.struct. author ...hhhhh...............hhhhh....................eeeee...hhhhhhhhhhhhhh..eeeee.hhhhhhhhhhhhhhhhhh...eee......hhhhhhhhhhhhhhhhh...eeee.........hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh....eeeee.hhhhh.....hhhhhhhhhhhhhhhhhhhhhhhhhh.eeeeeee....hhhhhh...hhhhh.............hhhhhhhhhhhhhhhhhh.....eeee....... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3r3s D   3 HLYDPTTQYYTGEYPKQKQPAPGVQAKMTPVPDCGEKSYVGSGRLKDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECGRKAVLLPGDLSDESFARSLVHKAREALGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKGASIITTSSIQAYQPSPHLLDYAATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGGQTQDKIPQFGQQTPMKRAGQPAELAPVYVYLASQESSYVTAEVHGVCGGEHLG 294
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292

Legend:		→ Mismatch	(orange background)
	-	→ Gap	(green background, '-', border residues have a numbering label)
		→ Modified Residue	(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
	x	→ Chemical Group	(purple background, 'x', labelled with number + name, e.g. ACE or NH2)
	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '\|'

Asymmetric/Biological Unit

Classes(

)

Folds(

)

Superfamilies( (-)

)

Families(

)

Protein Domains( (-)

)

Organisms( (-)

)

Class: Alpha and beta proteins (a/b) (23833)

Fold: NAD(P)-binding Rossmann-fold domains (1604)

Superfamily: NAD(P)-binding Rossmann-fold domains (1604)

Family: automated matches (447)

Protein domain: automated matches (447)

Salmonella enterica [TaxId: 90371] (1)

1a	d3r3sa_	A:
1b	d3r3sb_	B:
1c	d3r3sc_	C:
1d	d3r3sd_	D:

(no "CATH Domain" information available for 3R3S)

Asymmetric/Biological Unit

Clans(

)

Families(

)

Organisms( (-)

)

Clan: NADP_Rossmann (1239)

Family: adh_short_C2 (98)

Salmonella typhimurium (1)

1a	adh_short_C2-3r3sD01	D:55-292
1b	adh_short_C2-3r3sD02	D:55-292
1c	adh_short_C2-3r3sD03	D:55-292
1d	adh_short_C2-3r3sD04	D:55-292

Asymmetric/Biological Unit(hide GO term definitions)

Chain A,B,C,D (Q8ZM09_SALTY | Q8ZM09)

molecular function
	GO:0046872	metal ion binding	Interacting selectively and non-covalently with any metal ion.
	GO:0000166	nucleotide binding	Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose.
	GO:0016491	oxidoreductase activity	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
biological process
	GO:0055114	oxidation-reduction process	A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.

Asymmetric/Biological Unit
	Complete Structure
		Jena3D(integrated viewing of ligand, site, SAP, PROSITE, SCOP information)
		WebMol \| AstexViewer[tm]@PDBe (Java Applets, require no local installation except for Java; loading may be slow)
		STRAP (Java WebStart application, automatic local installation, requires Java; full application with system access!)
		RasMol (require local installation)
		Molscript (VRML) (requires installation of a VRML viewer; select preferred view via VRML and generate a mono or stereo PDF format file)

	Ligands, Modified Residues, Ions
		FMT	[ RasMol \| Jena3D ]	+environment [ RasMol \| Jena3D ]
		MG	[ RasMol \| Jena3D ]	+environment [ RasMol \| Jena3D ]
		NAD	[ RasMol \| Jena3D ]	+environment [ RasMol \| Jena3D ]
		SO4	[ RasMol \| Jena3D ]	+environment [ RasMol \| Jena3D ]

	Sites
		AC1	[ RasMol ]	+environment [ RasMol ]
		AC2	[ RasMol ]	+environment [ RasMol ]
		AC3	[ RasMol ]	+environment [ RasMol ]
		AC4	[ RasMol ]	+environment [ RasMol ]
		AC5	[ RasMol ]	+environment [ RasMol ]
		AC6	[ RasMol ]	+environment [ RasMol ]
		AC7	[ RasMol ]	+environment [ RasMol ]
		AC8	[ RasMol ]	+environment [ RasMol ]
		AC9	[ RasMol ]	+environment [ RasMol ]
		BC1	[ RasMol ]	+environment [ RasMol ]
		BC2	[ RasMol ]	+environment [ RasMol ]
		BC3	[ RasMol ]	+environment [ RasMol ]
		BC4	[ RasMol ]	+environment [ RasMol ]

	Cis Peptide Bonds
		Ala A:23 - Pro A:24	[ RasMol ]
		Ala B:23 - Pro B:24	[ RasMol ]
		Ala C:23 - Pro C:24	[ RasMol ]
		Ala D:23 - Pro D:24	[ RasMol ]
		Thr A:31 - Pro A:32	[ RasMol ]
		Thr B:31 - Pro B:32	[ RasMol ]
		Thr C:31 - Pro C:32	[ RasMol ]
		Thr D:31 - Pro D:32	[ RasMol ]

Jmol
	protein: cartoon or spacefill or dots and stick; nucleic acid: cartoon and stick; ligands: spacefill; active site: stick [ Asym./Biol. Unit PNG format \| Asym./Biol. Unit - sites PNG format ](automatic orientation, automatically generated)
Molscript
	protein, nucleic acid: cartoon; ligands: spacefill; active site: ball and stick [ mono PDF format \| stereo PDF format ](default orientation, automatically generated)

Access by PDB/NDB ID
	3r3s
		Family and Domain Information	:	ProDom \| SYSTERS
		General Structural Information	:	GlycoscienceDB \| MMDB \| NDB \| OCA \| PDB \| PDBe \| PDBj \| PDBsum \| PDBWiki \| PQS \| PROTEOPEDIA
		Orientation in Membranes	:	OPM
		Protein Surface	:	SURFACE
		Secondary Structure	:	DSSP (structure derived) \| HSSP (homology derived)
		Structural Genomics	:	GeneCensus
		Structural Neighbours	:	CE \| VAST
		Structure Classification	:	CATH \| Dali \| SCOP
		Validation and Original Data	:	BMRB Data View \| BMRB Restraints Grid \| EDS \| PROCHECK \| RECOORD \| WHAT_CHECK

Access by UniProt ID/Accession number
	Q8ZM09_SALTY \| Q8ZM09
		Comparative Protein Structure Models	:	ModBase
		Genomic Information	:	Ensembl
		Protein-protein Interaction	:	DIP
		Sequence, Family and Domain Information	:	InterPro \| Pfam \| SMART \| UniProtKB/TrEMBL

Access by Enzyme Classificator (EC Number)
	(no 'Enzyme Classificator' available)
		General Enzyme Information	:	BRENDA \| EC-PDB \| Enzyme \| IntEnz
		Pathway	:	KEGG \| MetaCyc

Access by Disease Identifier (MIM ID)
	(no 'MIM ID' available)
		Disease Information	:	OMIM

Access by GenAge ID
	(no 'GenAge ID' available)
		Age Related Information	:	GenAge

Access by PDB/NDB ID
		Domain Information	:	XDom
		Interatomic Contacts of Structural Units	:	CSU
		Ligand-protein Contacts	:	LPC
		Protein Cavities	:	castP
		Sequence and Secondary Structure	:	PDBCartoon
		Structure Alignment	:	STRAP(Java WebStart application, automatic local installation, requires Java; full application with system access!)
		Structure and Sequence Browser	:	STING

Access by UniProt ID/Accession number
	Q8ZM09_SALTY \| Q8ZM09
		Protein Disorder Prediction	:	DisEMBL \| FoldIndex \| GLOBPLOT (for more information see DisProt)

(no "Entries Sharing at Least One Protein Chain" available for 3R3S)

(no "Related Entries Specified in the PDB File" available for 3R3S)

Description

Compounds

Structural Features

Chains, Units

Ligands, Modified Residues, Ions (4, 13)

Sites (13, 13)

SS Bonds (0, 0)

Cis Peptide Bonds (8, 8)

Sequence-Structure Mapping

SAPs(SNPs)/Variants (0, 0)

PROSITE Motifs (0, 0)

Exons (0, 0)

Sequences/Alignments

Classification and Annotation

SCOP Domains (1, 4)

CATH Domains (0, 0)

Pfam Domains (1, 4)

Gene Ontology (4, 4)

Visualization

Interactive Views

Still Images

Databases and Analysis Tools

Databases

Analysis Tools

Related Entries

Entries Sharing at Least One Protein Chain (UniProt ID)

Related Entries Specified in the PDB File