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(-) Description

Title :  CRYSTAL STRUCTURE OF HOT-DOG-LIKE TACI_0573 PROTEIN FROM THERMANAEROVIBRIO ACIDAMINOVORANS
 
Authors :  K. Michalska, H. Li, S. Clancy, A. Joachimiak, Midwest Center For St Genomics (Mcsg)
Date :  10 Feb 11  (Deposition) - 23 Feb 11  (Release) - 23 Feb 11  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.25
Chains :  Asym. Unit :  A
Biol. Unit 1:  A  (2x)
Keywords :  Structural Genomics, Psi-Biology, Midwest Center For Structural Genomics, Mcsg, Hot-Dog Superfamily, Unknown Function (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  K. Michalska, H. Li, S. Clancy, A. Joachimiak
Crystal Structure Of Hot-Dog-Like Taci_0573 Protein From Thermanaerovibrio Acidaminovorans
To Be Published
PubMed: search

(-) Compounds

Molecule 1 - UNCHARACTERIZED PROTEIN
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PMCSG7
    Expression System Strain: BL21 MAGIC
    Expression System Taxid: 511693
    Expression System Vector Type: PLASMID
    Gene: TACI_0573
    Organism Scientific: THERMANAEROVIBRIO ACIDAMINOVORANS
    Organism Taxid: 525903
    Strain: DSM 6589

 Structural Features

(-) Chains, Units

  1
Asymmetric Unit : A
Biological Unit 1 (2x): A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (3, 10)

Asymmetric Unit (3, 10)
No.NameCountTypeFull Name
1CL4Ligand/IonCHLORIDE ION
2MSE5Mod. Amino AcidSELENOMETHIONINE
3NA1Ligand/IonSODIUM ION
Biological Unit 1 (1, 10)
No.NameCountTypeFull Name
1CL-1Ligand/IonCHLORIDE ION
2MSE10Mod. Amino AcidSELENOMETHIONINE
3NA-1Ligand/IonSODIUM ION

(-) Sites  (5, 5)

Asymmetric Unit (5, 5)
No.NameEvidenceResiduesDescription
1AC1SOFTWARESER A:20 , SER A:22 , GLU A:130 , HOH A:150 , HOH A:152 , HOH A:167 , HOH A:182BINDING SITE FOR RESIDUE NA A 136
2AC2SOFTWAREVAL A:21 , ARG A:127 , ARG A:131BINDING SITE FOR RESIDUE CL A 137
3AC3SOFTWAREVAL A:119 , SER A:120 , ARG A:127BINDING SITE FOR RESIDUE CL A 138
4AC4SOFTWAREARG A:67 , ARG A:90 , LEU A:113 , ARG A:135BINDING SITE FOR RESIDUE CL A 139
5AC5SOFTWARETHR A:38 , GLY A:65 , VAL A:66 , ARG A:67 , SER A:68 , ASN A:72BINDING SITE FOR RESIDUE CL A 140

(-) SS Bonds  (0, 0)

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(-) Sequences/Alignments

Asymmetric Unit
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SAPs(SNPs) PROSITE motifs Exons
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Chain A from PDB  Type:PROTEIN  Length:135
 aligned with D1B956_THEAS | D1B956 from UniProtKB/TrEMBL  Length:135

    Alignment length:135
                                    10        20        30        40        50        60        70        80        90       100       110       120       130     
         D1B956_THEAS     1 MDFNELFPVGTYRRMVKKVSVSDTVTNRSKALEEFMSTAAFLETMTQLAVEILDHKLPEGFVSVGVRSEVHNLAPAVLGDDVTFTVTVDRVEGNRVVLSMKADDPHGPVATGLQERVVVSTDLLEKRVWERFGGR 135
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhh....eeeeeee.hhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhh...eeeeeeeeeeee........eeeeeeeeeeee..eeeeeeeeee..eeeeeeeeeeeeeehhhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3qoo A   1 mDFNELFPVGTYRRmVKKVSVSDTVTNRSKALEEFmSTAAFLETmTQLAVEILDHKLPEGFVSVGVRSEVHNLAPAVLGDDVTFTVTVDRVEGNRVVLSmKADDPHGPVATGLQERVVVSTDLLEKRVWERFGGR 135
                            |       10    |   20        30     |  40    |   50        60        70        80        90       100       110       120       130     
                            |            15-MSE               36-MSE   45-MSE                                                100-MSE                               
                            1-MSE
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 Classification and Annotation

(-) SCOP Domains  (0, 0)

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(-) CATH Domains  (0, 0)

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