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(-) Description

Title :  CRYSTAL STRUCTURE OF AN IMELYSIN-LIKE PROTEIN (PSYC_1802) FROM PSYCHROBACTER ARCTICUM 273-4 AT 2.15 A RESOLUTION
 
Authors :  Joint Center For Structural Genomics (Jcsg)
Date :  27 Oct 10  (Deposition) - 10 Nov 10  (Release) - 20 Jul 11  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.15
Chains :  Asym./Biol. Unit :  A
Keywords :  Putative Metalloendopeptidase, Structural Genomics, Joint Center For Structural Genomics, Jcsg, Protein Structure Initiative, Psi- Biology, Unknown Function (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  Joint Center For Structural Genomics (Jcsg)
Crystal Structure Of An Imelysin-Like Protein (Psyc_1802) From Psychrobacter Arcticum 273-4 At 2. 15 A Resolution
To Be Published
PubMed: search

(-) Compounds

Molecule 1 - IMELYSIN-LIKE PROTEIN
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: SPEEDET
    Expression System Strain: HK100
    Expression System Taxid: 562
    Expression System Vector Type: PLASMID
    Gene: PSYC_1802
    Organism Scientific: PSYCHROBACTER ARCTICUS
    Organism Taxid: 259536
    Strain: 273-4

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit : A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 7)

Asymmetric/Biological Unit (1, 7)
No.NameCountTypeFull Name
1MSE7Mod. Amino AcidSELENOMETHIONINE

(-) Sites  (0, 0)

(no "Site" information available for 3PF0)

(-) SS Bonds  (1, 1)

Asymmetric/Biological Unit
No.Residues
1A:110 -A:211

(-) Cis Peptide Bonds  (2, 2)

Asymmetric/Biological Unit
No.Residues
1Ala A:113 -Pro A:114
2Tyr A:157 -Pro A:158

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 3PF0)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 3PF0)

(-) Exons   (0, 0)

(no "Exon" information available for 3PF0)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:318
 aligned with Q4FQQ8_PSYA2 | Q4FQQ8 from UniProtKB/TrEMBL  Length:389

    Alignment length:318
                                    75        85        95       105       115       125       135       145       155       165       175       185       195       205       215       225       235       245       255       265       275       285       295       305       315       325       335       345       355       365       375        
         Q4FQQ8_PSYA2    66 IVAVDISAETEKTYLTHVANDMVIPAYADAAKQSDLLHDLAQKHCQKAPVSGDELQALRDQWLVLAQAWASAEMVNFGPATASMSNLYINYYPDERGLVHGGVADLITANPALTAEQLANESAVVQGIPGLEEALYANDSLDAGQCAYVMSASSALGTRLKDIEKNWQQNAIKLLAIDKTAESDQGLNQWFNSLLSLVETMKSNAIEQPLGLSGKAKGHLPAATAGQSRAIINAKLATLNKAMTDPVLTAILGSNNENTVADTLSTALADTTALLAQMPEDLATADKATQQELYDHLTNITRLIKSQLIPTLGIRVGF 383
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ----------------------Peptidase_M75-3pf0A01 A:88-372                                                                                                                                                                                                                                                               ----------- Pfam domains
         Sec.struct. author ......hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhh......hhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhhhh...............hhhhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 3pf0 A  66 IVAVDISAETEKTYLTHVANDmVIPAYADAAKQSDLLHDLAQKHCQKAPVSGDELQALRDQWLVLAQAWASAEmVNFGPATASmSNLYINYYPDERGLVHGGVADLITANPALTAEQLANESAVVQGIPGLEEALYANDSLDAGQCAYVmSASSALGTRLKDIEKNWQQNAIKLLAIDKTAESDQGLNQWFNSLLSLVETmKSNAIEQPLGLSGKAKGHLPAATAGQSRAIINAKLATLNKAmTDPVLTAILGSNNENTVADTLSTALADTTALLAQmPEDLATADKATQQELYDHLTNITRLIKSQLIPTLGIRVGF 383
                                    75        85 |      95       105       115       125       135   |   145   |   155       165       175       185       195       205       215       225       235       245       255       265|      275       285       295       305  |    315       325       335       345       355       365       375        
                                                87-MSE                                             139-MSE   149-MSE                                                           215-MSE                                            266-MSE                                   308-MSE                            343-MSE
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  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 3PF0)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 3PF0)

(-) Pfam Domains  (1, 1)

Asymmetric/Biological Unit
(-)
Clan: no clan defined [family: Peptidase_M75] (1)

(-) Gene Ontology  (0, 0)

Asymmetric/Biological Unit(hide GO term definitions)
    (no "Gene Ontology" information available for 3PF0)

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  Cis Peptide Bonds
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