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(-) Description

Title :  CRYSTAL STRUCTURE OF GERANYLGERANYL PYROPHOSPHATE SYNTHASE FROM LACTOBACILLUS BREVIS ATCC 367 COMPLEXED WITH ISOPRENYL DIPHOSPHATE AND MAGNESIUM
 
Authors :  Y. Patskovsky, R. Toro, M. Rutter, J. M. Sauder, S. K. Burley, C. D. Poult J. A. Gerlt, S. C. Almo, New York Sgx Research Center For Structu Genomics (Nysgxrc)
Date :  22 Oct 10  (Deposition) - 17 Nov 10  (Release) - 08 May 13  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.75
Chains :  Asym. Unit :  A,B,C,D
Biol. Unit 1:  A,B  (1x)
Biol. Unit 2:  C (1x),D (1x)
Keywords :  Isoprenyl Diphosphate Synthase, Structural Genomics, Psi, Protein Structure Initiative, New York Structural Genomix Research Consortium, Nysgxrc, Isoprene Biosynthesis, Transferase, New York Sgx Research Center For Structural Genomics (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  F. H. Wallrapp, J. J. Pan, G. Ramamoorthy, D. E. Almonacid, B. S. Hillerich, R. Seidel, Y. Patskovsky, P. C. Babbitt, S. C. Almo, M. P. Jacobson, C. D. Poulter
Prediction Of Function For The Polyprenyl Transferase Subgroup In The Isoprenoid Synthase Superfamily.
Proc. Natl. Acad. Sci. Usa V. 110 E1196 2013
PubMed-ID: 23493556  |  Reference-DOI: 10.1073/PNAS.1300632110

(-) Compounds

Molecule 1 - FARNESYL-DIPHOSPHATE SYNTHASE
    Chains: A, B, C, D
    EC Number: 2.5.1.10
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Taxid: 562
    Gene: LVIS_0975
    Organism Scientific: LACTOBACILLUS BREVIS
    Organism Taxid: 387344
    Strain: ATCC 367 / JCM 1170

 Structural Features

(-) Chains, Units

  1234
Asymmetric Unit : ABCD
Biological Unit 1 (1x): AB  
Biological Unit 2 (1x):   C (1x)D (1x)

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (3, 18)

Asymmetric Unit (3, 18)
No.NameCountTypeFull Name
1DMA8Ligand/IonDIMETHYLALLYL DIPHOSPHATE
2GOL2Ligand/IonGLYCEROL
3MG8Ligand/IonMAGNESIUM ION
Biological Unit 1 (2, 5)
No.NameCountTypeFull Name
1DMA4Ligand/IonDIMETHYLALLYL DIPHOSPHATE
2GOL1Ligand/IonGLYCEROL
3MG-1Ligand/IonMAGNESIUM ION
Biological Unit 2 (2, 3)
No.NameCountTypeFull Name
1DMA2Ligand/IonDIMETHYLALLYL DIPHOSPHATE
2GOL1Ligand/IonGLYCEROL
3MG-1Ligand/IonMAGNESIUM ION

(-) Sites  (18, 18)

Asymmetric Unit (18, 18)
No.NameEvidenceResiduesDescription
01AC1SOFTWAREGLY A:47 , LYS A:48 , ARG A:51 , HIS A:82 , LEU A:86 , ARG A:101 , THR A:184 , PHE A:220 , DMA A:310 , HOH A:333 , HOH A:353 , HOH A:661 , HOH A:699 , HOH A:879 , HOH A:978BINDING SITE FOR RESIDUE DMA A 309
02AC2SOFTWARESER A:85 , ASP A:89 , ASP A:95 , ARG A:100 , LYS A:183 , DMA A:309 , MG A:311 , MG A:312 , HOH A:852 , HOH A:878 , HOH A:966 , HOH A:970BINDING SITE FOR RESIDUE DMA A 310
03AC3SOFTWAREASP A:89 , ASP A:95 , DMA A:310 , MG A:312 , HOH A:584 , HOH A:965 , HOH A:971BINDING SITE FOR RESIDUE MG A 311
04AC4SOFTWAREASP A:89 , ASP A:95 , DMA A:310 , MG A:311 , HOH A:878 , HOH A:970BINDING SITE FOR RESIDUE MG A 312
05AC5SOFTWARELEU A:275 , LEU A:278 , PRO A:279 , THR A:280 , SER A:281 , ARG A:284 , ASP A:285 , HOH A:481BINDING SITE FOR RESIDUE GOL A 313
06AC6SOFTWAREGLY B:47 , LYS B:48 , ARG B:51 , HIS B:82 , ARG B:101 , PHE B:220 , DMA B:312 , HOH B:338 , HOH B:422 , HOH B:791 , HOH B:794 , HOH B:921 , HOH B:985BINDING SITE FOR RESIDUE DMA B 309
07AC7SOFTWAREASP B:89 , ASP B:95 , ASP B:163 , MG B:311 , DMA B:312 , HOH B:636 , HOH B:973BINDING SITE FOR RESIDUE MG B 310
08AC8SOFTWAREASP B:89 , ASP B:95 , MG B:310 , DMA B:312 , HOH B:617 , HOH B:828BINDING SITE FOR RESIDUE MG B 311
09AC9SOFTWARESER B:85 , LEU B:86 , ASP B:89 , ASP B:95 , ARG B:100 , MET B:156 , GLN B:160 , LYS B:183 , DMA B:309 , MG B:310 , MG B:311 , HOH B:617 , HOH B:828 , HOH B:974 , HOH B:1041 , HOH B:1126BINDING SITE FOR RESIDUE DMA B 312
10BC1SOFTWAREGLY C:47 , LYS C:48 , ARG C:51 , HIS C:82 , LEU C:86 , ARG C:101 , THR C:184 , PHE C:220 , DMA C:310 , HOH C:339 , HOH C:382 , HOH C:604 , HOH C:717 , HOH C:987 , HOH C:994BINDING SITE FOR RESIDUE DMA C 309
11BC2SOFTWARESER C:85 , ASP C:89 , ASP C:95 , ARG C:100 , MET C:156 , GLN C:160 , LYS C:183 , DMA C:309 , MG C:311 , MG C:312 , HOH C:596 , HOH C:795 , HOH C:800 , HOH C:847 , HOH C:995BINDING SITE FOR RESIDUE DMA C 310
12BC3SOFTWAREASP C:89 , ASP C:95 , DMA C:310 , MG C:312 , HOH C:795 , HOH C:800BINDING SITE FOR RESIDUE MG C 311
13BC4SOFTWAREASP C:89 , ASP C:95 , ASP C:163 , DMA C:310 , MG C:311 , HOH C:596 , HOH C:989BINDING SITE FOR RESIDUE MG C 312
14BC5SOFTWAREPRO C:21 , PRO C:68 , ARG C:73 , GLN C:175 , HOH C:345 , HOH C:371BINDING SITE FOR RESIDUE GOL C 313
15BC6SOFTWAREGLY D:47 , LYS D:48 , ARG D:51 , HIS D:82 , ARG D:101 , PHE D:220 , DMA D:312 , HOH D:342 , HOH D:585 , HOH D:597 , HOH D:938 , HOH D:944 , HOH D:956BINDING SITE FOR RESIDUE DMA D 309
16BC7SOFTWAREASP D:89 , ASP D:95 , MG D:311 , DMA D:312 , HOH D:434 , HOH D:958BINDING SITE FOR RESIDUE MG D 310
17BC8SOFTWAREASP D:89 , ASP D:95 , MG D:310 , DMA D:312 , HOH D:753 , HOH D:822 , HOH D:957BINDING SITE FOR RESIDUE MG D 311
18BC9SOFTWARESER D:85 , ASP D:89 , ASP D:95 , ARG D:100 , LYS D:183 , DMA D:309 , MG D:310 , MG D:311 , HOH D:434 , HOH D:889 , HOH D:932 , HOH D:957 , HOH D:958 , HOH D:1081BINDING SITE FOR RESIDUE DMA D 312

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 3PDE)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 3PDE)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 3PDE)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 3PDE)

(-) Exons   (0, 0)

(no "Exon" information available for 3PDE)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:289
 aligned with Q03RR4_LACBA | Q03RR4 from UniProtKB/TrEMBL  Length:300

    Alignment length:300
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300
         Q03RR4_LACBA     1 MPINARLIAFEDQWVPALNAPLKQAILADSHDAQLAAAMTYSVLAGGKRLRPLLTVATMRSLGVTFVPERHWRPVMALELLHTYSLIHDDLPAMDNDALRRGEPTNHVKFGAGMATLAGDGLLTLAFQWLTATDLPATMQAALVQALATAAGPSGMVAGQAKDIQSEHVNLPLSQLRVLHKEKTGALLHYAVQAGLILGQAPEAQWPAYLQFADAFGLAFQIYDDILDVVSSPAEMGKATQKDADEAKNTYPGKLGLIGANQALIDTIHSGQAALQGLPTSTQRDDLAAFFSYFDTERVN 300
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ..eehhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhh...hhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhhhhh.......ee..eehhhhhhhhhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhh..hhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.-----------......hhhhhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhh...... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 3pde A   1 SLINARLIAFEDQWVPALNAPLKQAILADSQDAQLAAAMTYSVLAGGKRLRPLLTVATMQSLGVTFVPERHWRPVMALELLHTYSLIHDDLPAMDNDALRRGEPTNHVKFGAGMATLAGDGLLTLAFQWLTATDLPATMQAALVQALATAAGPSGMVAGQAKDIQSEHVNLPLSQLRVLHKEKTGALLHYAVQAGLILGQAPEAQWPAYLQFADAFGLAFQIYDDILDVVSS-----------ADEAKNTYPGKLGLIGANQALIDTIHSGQAALQGLPTSTQRDDLAAFFSYFDTERVN 300
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230 |       -   |   250       260       270       280       290       300
                                                                                                                                                                                                                                                                 232         244                                                        


Chain B from PDB  Type:PROTEIN  Length:287
 aligned with Q03RR4_LACBA | Q03RR4 from UniProtKB/TrEMBL  Length:300

    Alignment length:298
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290        
         Q03RR4_LACBA     1 MPINARLIAFEDQWVPALNAPLKQAILADSHDAQLAAAMTYSVLAGGKRLRPLLTVATMRSLGVTFVPERHWRPVMALELLHTYSLIHDDLPAMDNDALRRGEPTNHVKFGAGMATLAGDGLLTLAFQWLTATDLPATMQAALVQALATAAGPSGMVAGQAKDIQSEHVNLPLSQLRVLHKEKTGALLHYAVQAGLILGQAPEAQWPAYLQFADAFGLAFQIYDDILDVVSSPAEMGKATQKDADEAKNTYPGKLGLIGANQALIDTIHSGQAALQGLPTSTQRDDLAAFFSYFDTER 298
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhh...hhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhhhhh.......ee..eehhhhhhhhhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhh..hhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhh-----------hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3pde B   1 SLINARLIAFEDQWVPALNAPLKQAILADSQDAQLAAAMTYSVLAGGKRLRPLLTVATMQSLGVTFVPERHWRPVMALELLHTYSLIHDDLPAMDNDALRRGEPTNHVKFGAGMATLAGDGLLTLAFQWLTATDLPATMQAALVQALATAAGPSGMVAGQAKDIQSEHVNLPLSQLRVLHKEKTGALLHYAVQAGLILGQAPEAQWPAYLQFADAFGLAFQIYDDILDVVS-----------DADEAKNTYPGKLGLIGANQALIDTIHSGQAALQGLPTSTQRDDLAAFFSYFDTER 298
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230|        -  |    250       260       270       280       290        
                                                                                                                                                                                                                                                                231         243                                                       


Chain C from PDB  Type:PROTEIN  Length:282
 aligned with Q03RR4_LACBA | Q03RR4 from UniProtKB/TrEMBL  Length:300

    Alignment length:298
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290        
         Q03RR4_LACBA     1 MPINARLIAFEDQWVPALNAPLKQAILADSHDAQLAAAMTYSVLAGGKRLRPLLTVATMRSLGVTFVPERHWRPVMALELLHTYSLIHDDLPAMDNDALRRGEPTNHVKFGAGMATLAGDGLLTLAFQWLTATDLPATMQAALVQALATAAGPSGMVAGQAKDIQSEHVNLPLSQLRVLHKEKTGALLHYAVQAGLILGQAPEAQWPAYLQFADAFGLAFQIYDDILDVVSSPAEMGKATQKDADEAKNTYPGKLGLIGANQALIDTIHSGQAALQGLPTSTQRDDLAAFFSYFDTER 298
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhh...hhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhhhhh.......ee..eehhhhhhhhhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhh..hhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhh----------------..hhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3pde C   1 SLINARLIAFEDQWVPALNAPLKQAILADSQDAQLAAAMTYSVLAGGKRLRPLLTVATMQSLGVTFVPERHWRPVMALELLHTYSLIHDDLPAMDNDALRRGEPTNHVKFGAGMATLAGDGLLTLAFQWLTATDLPATMQAALVQALATAAGPSGMVAGQAKDIQSEHVNLPLSQLRVLHKEKTGALLHYAVQAGLILGQAPEAQWPAYLQFADAFGLAFQIYDDILDVVS----------------KNTYPGKLGLIGANQALIDTIHSGQAALQGLPTSTQRDDLAAFFSYFDTER 298
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230|        -       250       260       270       280       290        
                                                                                                                                                                                                                                                                231              248                                                  


Chain D from PDB  Type:PROTEIN  Length:291
 aligned with Q03RR4_LACBA | Q03RR4 from UniProtKB/TrEMBL  Length:300

    Alignment length:300
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300
         Q03RR4_LACBA     1 MPINARLIAFEDQWVPALNAPLKQAILADSHDAQLAAAMTYSVLAGGKRLRPLLTVATMRSLGVTFVPERHWRPVMALELLHTYSLIHDDLPAMDNDALRRGEPTNHVKFGAGMATLAGDGLLTLAFQWLTATDLPATMQAALVQALATAAGPSGMVAGQAKDIQSEHVNLPLSQLRVLHKEKTGALLHYAVQAGLILGQAPEAQWPAYLQFADAFGLAFQIYDDILDVVSSPAEMGKATQKDADEAKNTYPGKLGLIGANQALIDTIHSGQAALQGLPTSTQRDDLAAFFSYFDTERVN 300
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
           Pfam domains (1) ----------------------------------polyprenyl_synt-3pdeD01 D:35-287                                                                                                                                                                                                                             ------------- Pfam domains (1)
           Pfam domains (2) ----------------------------------polyprenyl_synt-3pdeD02 D:35-287                                                                                                                                                                                                                             ------------- Pfam domains (2)
           Pfam domains (3) ----------------------------------polyprenyl_synt-3pdeD03 D:35-287                                                                                                                                                                                                                             ------------- Pfam domains (3)
           Pfam domains (4) ----------------------------------polyprenyl_synt-3pdeD04 D:35-287                                                                                                                                                                                                                             ------------- Pfam domains (4)
         Sec.struct. author ...hhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhh...hhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhhhhh.......ee..eehhhhhhhhhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhh..hhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhee..---------.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhh...... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 3pde D   1 SLINARLIAFEDQWVPALNAPLKQAILADSQDAQLAAAMTYSVLAGGKRLRPLLTVATMQSLGVTFVPERHWRPVMALELLHTYSLIHDDLPAMDNDALRRGEPTNHVKFGAGMATLAGDGLLTLAFQWLTATDLPATMQAALVQALATAAGPSGMVAGQAKDIQSEHVNLPLSQLRVLHKEKTGALLHYAVQAGLILGQAPEAQWPAYLQFADAFGLAFQIYDDILDVVSSPA---------ADEAKNTYPGKLGLIGANQALIDTIHSGQAALQGLPTSTQRDDLAAFFSYFDTERVN 300
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230   |     -   |   250       260       270       280       290       300
                                                                                                                                                                                                                                                                   234       244
   Legend:   → Mismatch (orange background)
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  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 3PDE)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 3PDE)

(-) Pfam Domains  (1, 4)

Asymmetric Unit
(-)
Clan: no clan defined [family: polyprenyl_synt] (86)

(-) Gene Ontology  (4, 4)

Asymmetric Unit(hide GO term definitions)
Chain A,B,C,D   (Q03RR4_LACBA | Q03RR4)
molecular function
    GO:0004337    geranyltranstransferase activity    Catalysis of the reaction: geranyl diphosphate + isopentenyl diphosphate = 2-trans,6-trans-farnesyl diphosphate + diphosphate.
    GO:0016740    transferase activity    Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2.
biological process
    GO:0045337    farnesyl diphosphate biosynthetic process    The chemical reactions and pathways resulting in the formation of farnesyl diphosphate.
    GO:0008299    isoprenoid biosynthetic process    The chemical reactions and pathways resulting in the formation of any isoprenoid compound, isoprene (2-methylbuta-1,3-diene) or compounds containing or derived from linked isoprene (3-methyl-2-butenylene) residues.

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        Q03RR4_LACBA | Q03RR4: 3m9u

(-) Related Entries Specified in the PDB File

3m9u LIGAND-FREE ENZYME RELATED ID: NYSGXRC-20032B RELATED DB: TARGETDB