3P9X - JenaLib

Asymmetric Unit (11, 11)

No.	Name	Evidence	Residues	Description
01	AC1	SOFTWARE	SER A:9 , SER A:11 , GLY A:12 , THR A:13 , ASN A:14 , HOH A:223 , HOH A:280 , HOH A:285	BINDING SITE FOR RESIDUE SO4 A 211
02	AC2	SOFTWARE	LYS A:38 , PRO A:39 , GLY A:40 , ARG B:104 , HOH B:368	BINDING SITE FOR RESIDUE SO4 A 212
03	AC3	SOFTWARE	ARG A:104 , HOH A:318 , LYS B:38 , PRO B:39 , GLY B:40	BINDING SITE FOR RESIDUE SO4 A 213
04	AC4	SOFTWARE	ALA A:172 , ARG A:176 , HOH A:236 , HOH A:270	BINDING SITE FOR RESIDUE SO4 A 214
05	AC5	SOFTWARE	LYS A:65 , ARG A:91 , LEU A:92	BINDING SITE FOR RESIDUE SO4 A 215
06	AC6	SOFTWARE	VAL A:155 , SER A:156 , HOH A:226 , HOH A:243	BINDING SITE FOR RESIDUE GOL A 216
07	AC7	SOFTWARE	SER B:9 , SER B:11 , GLY B:12 , THR B:13 , ASN B:14 , HOH B:220 , HOH B:272 , HOH B:301	BINDING SITE FOR RESIDUE SO4 B 211
08	AC8	SOFTWARE	ARG B:176 , HOH B:226 , HOH B:257	BINDING SITE FOR RESIDUE SO4 B 212
09	AC9	SOFTWARE	GLU B:16 , ARG B:46 , ASN B:129 , HOH B:293	BINDING SITE FOR RESIDUE SO4 B 213
10	BC1	SOFTWARE	VAL B:155 , SER B:156 , HOH B:217 , HOH B:231	BINDING SITE FOR RESIDUE GOL B 214
11	BC2	SOFTWARE	MET B:90 , PRO B:110 , LEU B:119 , HIS B:120 , HOH B:374	BINDING SITE FOR RESIDUE GOL B 215

SS Bonds (0, 0)

Cis Peptide Bonds (2, 2)

Sequence-Structure Mapping

SAPs(SNPs)/Variants (0, 0)

PROSITE Motifs (0, 0)

Exons (0, 0)

Sequences/Alignments

Asymmetric/Biological Unit

Reformat:	Number of residues per line = ('0' or empty: single-line sequence representation)
	Number of residues per labelling interval =
	UniProt sequence: complete aligned part

Show mapping:	SCOP domains	CATH domains	Pfam domains	Secondary structure (by author)
	SAPs(SNPs)	PROSITE motifs	Exons
	(details for a mapped element are shown in a popup box when the mouse pointer rests over it)

Chain A from PDB  Type:PROTEIN  Length:195
 aligned with Q9KF54_BACHD | Q9KF54 from UniProtKB/TrEMBL  Length:188

    Alignment length:195
                                                                                                                                                                                                                    188        
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181      |  -     
         Q9KF54_BACHD     2 KRVAIFASGSGTNAEAIIQSQKAGQLPCEVALLITDKPGAKVVERVKVHEIPVCALDPKTYPSKEAYEIEVVQQLKEKQIDFVVLAGYMRLVGPTLLGAYEGRIVNIHPSLLPAFPGLHAIEQAIRANVKVTGVTIHYVDEGMDTGPIIAQEAVSIEEEDTLETLTTKIQAVEHRLYPATLHKLLSK--------   -
               SCOP domains d3p9xa_ A: automated matches                                                                                                                                                                        SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeee....hhhhhhhhhhhhh.....eeeeeee....hhhhhhhhh....eee.hhhhh.hhhhhhhhhhhhhhhh...eeee.......hhhhhhhhh..eeeee..........hhhhhhhhh...eeeeeeee.........eeeeeeee.....hhhhhhhhhhhhhhhhhhhhhhhhh.......... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3p9x A   2 KRVAIFASGSGTNAEAIIQSQKAGQLPCEVALLITDKPGAKVVERVKVHEIPVCALDPKTYPSKEAYEIEVVQQLKEKQIDFVVLAGYMRLVGPTLLGAYEGRIVNIHPSLLPAFPGLHAIEQAIRANVKVTGVTIHYVDEGMDTGPIIAQEAVSIEEEDTLETLTTKIQAVEHRLYPATLHKLLSKAENLYFQS 196
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191

Chain B from PDB  Type:PROTEIN  Length:194
 aligned with Q9KF54_BACHD | Q9KF54 from UniProtKB/TrEMBL  Length:188

    Alignment length:194
                                                                                                                                                                                                                    188       
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181      |  -    
         Q9KF54_BACHD     2 KRVAIFASGSGTNAEAIIQSQKAGQLPCEVALLITDKPGAKVVERVKVHEIPVCALDPKTYPSKEAYEIEVVQQLKEKQIDFVVLAGYMRLVGPTLLGAYEGRIVNIHPSLLPAFPGLHAIEQAIRANVKVTGVTIHYVDEGMDTGPIIAQEAVSIEEEDTLETLTTKIQAVEHRLYPATLHKLLSK-------   -
               SCOP domains d3p9xb_ B: automated matches                                                                                                                                                                       SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
           Pfam domains (1) Formyl_trans_N-3p9xB01 B:2-182                                                                                                                                                       ------------- Pfam domains (1)
           Pfam domains (2) Formyl_trans_N-3p9xB02 B:2-182                                                                                                                                                       ------------- Pfam domains (2)
         Sec.struct. author .eeeee....hhhhhhhhhhhhh.....eeeeeee....hhhhhhhhh....eee.hhhhh.hhhhhhhhhhhhhhhh...eeee.......hhhhhhhhh..eeeee..........hhhhhhhhh...eeeeeeee.........eeeeeeee.....hhhhhhhhhhhhhhhhhhhhhhhhh......... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3p9x B   2 KRVAIFASGSGTNAEAIIQSQKAGQLPCEVALLITDKPGAKVVERVKVHEIPVCALDPKTYPSKEAYEIEVVQQLKEKQIDFVVLAGYMRLVGPTLLGAYEGRIVNIHPSLLPAFPGLHAIEQAIRANVKVTGVTIHYVDEGMDTGPIIAQEAVSIEEEDTLETLTTKIQAVEHRLYPATLHKLLSKAENLYFQ 195
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191

Legend:		→ Mismatch	(orange background)
	-	→ Gap	(green background, '-', border residues have a numbering label)
		→ Modified Residue	(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
	x	→ Chemical Group	(purple background, 'x', labelled with number + name, e.g. ACE or NH2)
	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '\|'

Classification and Annotation

SCOP Domains (1, 2)

CATH Domains (0, 0)

Pfam Domains (1, 2)

Gene Ontology (6, 6)

Asymmetric/Biological Unit(hide GO term definitions)

Chain A,B (Q9KF54_BACHD | Q9KF54)

molecular function
	GO:0016742	hydroxymethyl-, formyl- and related transferase activity	Catalysis of the transfer of a hydroxymethyl- or formyl group from one compound (donor) to another (acceptor).
	GO:0004644	phosphoribosylglycinamide formyltransferase activity	Catalysis of the reaction: 10-formyltetrahydrofolate + N1-(5-phospho-D-ribosyl)glycinamide = tetrahydrofolate + N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide.
	GO:0016740	transferase activity	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2.
biological process
	GO:0006189	'de novo' IMP biosynthetic process	The chemical reactions and pathways resulting in the formation of IMP, inosine monophosphate, by the stepwise assembly of a purine ring on ribose 5-phosphate.
	GO:0009058	biosynthetic process	The chemical reactions and pathways resulting in the formation of substances; typically the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones.
	GO:0006164	purine nucleotide biosynthetic process	The chemical reactions and pathways resulting in the formation of a purine nucleotide, a compound consisting of nucleoside (a purine base linked to a deoxyribose or ribose sugar) esterified with a phosphate group at either the 3' or 5'-hydroxyl group of the sugar.

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	Cis Peptide Bonds
		Leu A:113 - Pro A:114	[ RasMol ]
		Leu B:113 - Pro B:114	[ RasMol ]

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	3p9x
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Description

Compounds

Structural Features

Chains, Units

Ligands, Modified Residues, Ions (2, 11)

Sites (11, 11)