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(-) Description

Title :  HIGH RESOLUTION CRYSTAL STRUCTURE OF PROTEIN MAQU_3174 FROM MARINOBACTER AQUAEOLEI, NORTHEAST STRUCTURAL GENOMICS CONSORTIUM TARGET MQR197
 
Authors :  A. Kuzin, Y. Chen, J. Seetharaman, M. Mao, R. Xiao, C. Ciccosanti, H. Wan J. K. Everett, R. Nair, T. B. Acton, B. Rost, G. T. Montelione, J. F. Hunt Northeast Structural Genomics Consortium (Nesg)
Date :  18 Oct 10  (Deposition) - 27 Oct 10  (Release) - 22 Feb 12  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.78
Chains :  Asym. Unit :  A,B
Biol. Unit 1:  A (1x),B (1x)
Keywords :  Structural Genomics, Psi-Biology, Protein Structure Initiative, Northeast Structural Genomics Consortium, Nesg, Unknown Function (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  A. Kuzin, Y. Chen, J. Seetharaman, M. Mao, R. Xiao, C. Ciccosanti, H. Wang, J. K. Everett, R. Nair, T. B. Acton, B. Rost, G. T. Montelione, J. F. Hunt, L. Tong
Northeast Structural Genomics Consortium Target Mqr197
To Be Published
PubMed: search

(-) Compounds

Molecule 1 - UNCHARACTERIZED PROTEIN
    Chains: A, B
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Taxid: 562
    Expression System Vector: PET 21-23C
    Gene: MAQU_3174
    Organism Scientific: MARINOBACTER AQUAEOLEI
    Organism Taxid: 351348
    Strain: ATCC 700491 / DSM 11845 / VT8

 Structural Features

(-) Chains, Units

  12
Asymmetric Unit : AB
Biological Unit 1 (1x): A (1x)B (1x)

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 4)

Asymmetric Unit (1, 4)
No.NameCountTypeFull Name
1MSE4Mod. Amino AcidSELENOMETHIONINE
Biological Unit 1 (1, 2)
No.NameCountTypeFull Name
1MSE2Mod. Amino AcidSELENOMETHIONINE

(-) Sites  (0, 0)

(no "Site" information available for 3P9V)

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 3P9V)

(-) Cis Peptide Bonds  (3, 3)

Asymmetric Unit
No.Residues
1Val A:57 -Gly A:58
2Leu A:154 -Glu A:155
3Val B:57 -Gly B:58

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 3P9V)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 3P9V)

(-) Exons   (0, 0)

(no "Exon" information available for 3P9V)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
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SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:158
 aligned with A1U5H9_MARHV | A1U5H9 from UniProtKB/TrEMBL  Length:153

    Alignment length:158
                                                                                                                                                                                 153      
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151 |      
         A1U5H9_MARHV     2 AITVSIELNRDLEIPASYDEVFDLLADVPKSASHFPKVDKLVDLGNNAYRWEMEKVGVDKHAIQSVYACTYHADKEAGKITWSPIKGEGNGVVSGSWTLSAKGDNATAVKFQTSAELTVPLPSLLKLAISPVIKHEFNSLVDTYMANLKKAF------   -
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeeeeeeeeee..hhhhhhhhhhhhhhhhh....eeeeeeee..eeeeee....hhhhh...eeeeeeeee....eeeeee......eeeeeeeeeee.....eeeeeeeeeeeee..hhhhhhhhhhhhhhhhhhhhhhhhhhhhh........ Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3p9v A   2 AITVSIELNRDLEIPASYDEVFDLLADVPKSASHFPKVDKLVDLGNNAYRWEmEKVGVDKHAIQSVYACTYHADKEAGKITWSPIKGEGNGVVSGSWTLSAKGDNATAVKFQTSAELTVPLPSLLKLAISPVIKHEFNSLVDTYmANLKKAFLEHHHH 159
                                    11        21        31        41        51  |     61        71        81        91       101       111       121       131       141    |  151        
                                                                               54-MSE                                                                                     146-MSE         


Chain B from PDB  Type:PROTEIN  Length:153
 aligned with A1U5H9_MARHV | A1U5H9 from UniProtKB/TrEMBL  Length:153

    Alignment length:153
                                                                                                                                                                                 153 
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151 | 
         A1U5H9_MARHV     2 AITVSIELNRDLEIPASYDEVFDLLADVPKSASHFPKVDKLVDLGNNAYRWEMEKVGVDKHAIQSVYACTYHADKEAGKITWSPIKGEGNGVVSGSWTLSAKGDNATAVKFQTSAELTVPLPSLLKLAISPVIKHEFNSLVDTYMANLKKAF-   -
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeeeeeeeeee..hhhhhhhhhhhhhhhhh....eeeeeeee..eeeeee....hhhhh...eeeeeeeee....eeeeee......eeeeeeeeeee.....eeeeeeeeeeeee..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3p9v B   2 AITVSIELNRDLEIPASYDEVFDLLADVPKSASHFPKVDKLVDLGNNAYRWEmEKVGVDKHAIQSVYACTYHADKEAGKITWSPIKGEGNGVVSGSWTLSAKGDNATAVKFQTSAELTVPLPSLLKLAISPVIKHEFNSLVDTYmANLKKAFL 154
                                    11        21        31        41        51  |     61        71        81        91       101       111       121       131       141    |  151   
                                                                               54-MSE                                                                                     146-MSE
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 3P9V)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 3P9V)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 3P9V)

(-) Gene Ontology  (0, 0)

Asymmetric Unit(hide GO term definitions)
    (no "Gene Ontology" information available for 3P9V)

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  Cis Peptide Bonds
    Leu A:154 - Glu A:155   [ RasMol ]  
    Val A:57 - Gly A:58   [ RasMol ]  
    Val B:57 - Gly B:58   [ RasMol ]  
 
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