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(-) Description

Title :  CRYSTAL STRUCTURE ENOYL-COA HYDRATASE FROM MYCOBACTERIUM AVIUM
 
Authors :  Seattle Structural Genomics Center For Infectious Disease (S
Date :  13 Oct 10  (Deposition) - 03 Nov 10  (Release) - 22 Apr 15  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.90
Chains :  Asym. Unit :  A
Biol. Unit 1:  A  (6x)
Keywords :  Ssgcid, Enoyl-Coa Hydratase, Mycobacerium Avium, Structural Genomics, Seattle Structural Genomics Center For Infectious Disease, Lyase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  L. Baugh, I. Phan, D. W. Begley, M. C. Clifton, B. Armour, D. M. Dranow, B. M. Taylor, M. M. Muruthi, J. Abendroth, J. W. Fairman, D. Fox, S. H. Dieterich, B. L. Staker, A. S. Gardberg, R. Choi, S. N. Hewitt, A. J. Napuli, J. Myers, L. K. Barrett, Y. Zhang, M. Ferrell, E. Mundt, K. Thompkins, N. Tran, S. Lyons-Abbott, A. Abramov, A. Sekar, D. Serbzhinskiy, D. Lorimer, G. W. Buchko, R. Stacy, L. J. Stewart, T. E. Edwards, W. C. Van Voorhis, P. J. Myler
Increasing The Structural Coverage Of Tuberculosis Drug Targets.
Tuberculosis (Edinb) V. 95 142 2015
PubMed-ID: 25613812  |  Reference-DOI: 10.1016/J.TUBE.2014.12.003

(-) Compounds

Molecule 1 - ENOYL-COA HYDRATASE
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: AVA0421
    Expression System Strain: BL21(DE3)
    Expression System Taxid: 469008
    Expression System Vector Type: PLASMID
    Gene: MAV_3689
    Organism Scientific: MYCOBACTERIUM AVIUM
    Organism Taxid: 243243
    Strain: 104

 Structural Features

(-) Chains, Units

  1
Asymmetric Unit : A
Biological Unit 1 (6x): A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (5, 6)

Asymmetric Unit (5, 6)
No.NameCountTypeFull Name
11PE1Ligand/IonPENTAETHYLENE GLYCOL
2ACT1Ligand/IonACETATE ION
3CA2Ligand/IonCALCIUM ION
4CAC1Ligand/IonCACODYLATE ION
5EDO1Ligand/Ion1,2-ETHANEDIOL
Biological Unit 1 (4, 24)
No.NameCountTypeFull Name
11PE6Ligand/IonPENTAETHYLENE GLYCOL
2ACT6Ligand/IonACETATE ION
3CA-1Ligand/IonCALCIUM ION
4CAC6Ligand/IonCACODYLATE ION
5EDO6Ligand/Ion1,2-ETHANEDIOL

(-) Sites  (6, 6)

Asymmetric Unit (6, 6)
No.NameEvidenceResiduesDescription
1AC1SOFTWARETHR A:10 , ASP A:46 , ASP A:48 , HOH A:414 , HOH A:415 , HOH A:417BINDING SITE FOR RESIDUE CA A 300
2AC2SOFTWAREALA A:161 , ARG A:165 , VAL A:172 , HOH A:347 , HOH A:389BINDING SITE FOR RESIDUE ACT A 301
3AC3SOFTWARELEU A:65 , ILE A:79 , GLU A:104 , HIS A:124 , LEU A:130 , PRO A:131 , THR A:132 , TRP A:133 , HOH A:322BINDING SITE FOR RESIDUE CAC A 302
4AC4SOFTWAREEDO A:305 , HOH A:306BINDING SITE FOR RESIDUE CA A 304
5AC5SOFTWARELEU A:147 , ARG A:150 , MET A:151 , ASP A:156 , TYR A:157 , ASP A:162 , LEU A:164 , THR A:170 , GLU A:171 , HOH A:325 , HOH A:368 , HOH A:466 , HOH A:511BINDING SITE FOR RESIDUE 1PE A 303
6AC6SOFTWAREGLN A:141 , LYS A:142 , ALA A:166 , CA A:304 , HOH A:306BINDING SITE FOR RESIDUE EDO A 305

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 3P85)

(-) Cis Peptide Bonds  (1, 1)

Asymmetric Unit
No.Residues
1Asp A:58 -Pro A:59

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 3P85)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 3P85)

(-) Exons   (0, 0)

(no "Exon" information available for 3P85)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:224
 aligned with A0A0H2ZUQ2_M | A0A0H2ZUQ2 from UniProtKB/TrEMBL  Length:249

    Alignment length:230
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193       203       213       223       233
         A0A0H2ZUQ2_M     4 EILLSNTEERVRTLTLNRPQARNALSAALRDRFFGALADAETDDDVDVVIITGADPVFCAGLDLKELGGSSALPDISPRWPALTKPVIGAINGAAVTGGLELALYCDILIASENARFADTHARVGLLPTWGLSVRLPQKVGIGLARRMSLTGDYLSAADALRAGLVTEVVPHDQLLGAARAVAASIVGNNQNAVRALLTSYHRIDDAQTSAGLWQEAMAARQFRTSGDDI 233
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeeee..eeeeee.hhhhh...hhhhhhhhhhhhhhhhhh....eeeeee..............------.............eeeee..eeehhhhhhhhhh.eeeee...eee............hhhhhhhhhhhhhhhhhhhhhh..eehhhhhhh....eeehhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3p85 A   4 EILLSNTEERVRTLTLNRPQARNALSAALRDRFFGALADAETDDDVDVVIITGADPVFCAGLDLKEL------PDISPRWPALTKPVIGAINGAAVTGGLELALYCDILIASENARFADTHARVGLLPTWGLSVRLPQKVGIGLARRMSLTGDYLSAADALRAGLVTEVVPHDQLLGAARAVAASIVGNNQNAVRALLTSYHRIDDAQTSAGLWQEAMAARQFRTSGDDI 233
                                    13        23        33        43        53        63      |  -   |    83        93       103       113       123       133       143       153       163       173       183       193       203       213       223       233
                                                                                             70     77                                                                                                                                                            


Chain A from PDB  Type:PROTEIN  Length:224
 aligned with A0A0M3KKT5_M | A0A0M3KKT5 from UniProtKB/TrEMBL  Length:262

    Alignment length:230
                                    26        36        46        56        66        76        86        96       106       116       126       136       146       156       166       176       186       196       206       216       226       236       246
         A0A0M3KKT5_M    17 EILLSNTEERVRTLTLNRPQARNALSAALRDRFFGALADAETDDDVDVVIITGADPVFCAGLDLKELGGSSALPDISPRWPALTKPVIGAINGAAVTGGLELALYCDILIASENARFADTHARVGLLPTWGLSVRLPQKVGIGLARRMSLTGDYLSAADALRAGLVTEVVPHDQLLGAARAVAASIVGNNQNAVRALLTSYHRIDDAQTSAGLWQEAMAARQFRTSGDDI 246
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeeee..eeeeee.hhhhh...hhhhhhhhhhhhhhhhhh....eeeeee..............------.............eeeee..eeehhhhhhhhhh.eeeee...eee............hhhhhhhhhhhhhhhhhhhhhh..eehhhhhhh....eeehhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3p85 A   4 EILLSNTEERVRTLTLNRPQARNALSAALRDRFFGALADAETDDDVDVVIITGADPVFCAGLDLKEL------PDISPRWPALTKPVIGAINGAAVTGGLELALYCDILIASENARFADTHARVGLLPTWGLSVRLPQKVGIGLARRMSLTGDYLSAADALRAGLVTEVVPHDQLLGAARAVAASIVGNNQNAVRALLTSYHRIDDAQTSAGLWQEAMAARQFRTSGDDI 233
                                    13        23        33        43        53        63      |  -   |    83        93       103       113       123       133       143       153       163       173       183       193       203       213       223       233
                                                                                             70     77
   Legend:   → Mismatch (orange background)
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  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 3P85)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 3P85)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 3P85)

(-) Gene Ontology  (0, 0)

Asymmetric Unit(hide GO term definitions)
    (no "Gene Ontology" information available for 3P85)

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