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(-) Description

Title :  THE CRYSTAL STRUCTURE OF A UNIVERSAL STRESS PROTEIN E FROM PROTEUS MIRABILIS HI4320
 
Authors :  K. Tan, G. Chhor, J. Bearden, A. Joachimiak, Midwest Center For Stru Genomics (Mcsg)
Date :  26 Aug 10  (Deposition) - 22 Sep 10  (Release) - 22 Sep 10  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.82
Chains :  Asym. Unit :  A
Biol. Unit 1:  A  (2x)
Keywords :  Structural Genomics, Psi-2, Protein Structure Initiative, Midwest Center For Structural Genomics, Mcsg, Unknown Function (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  K. Tan, G. Chhor, J. Bearden, A. Joachimiak
The Crystal Structure Of A Universal Stress Protein E From Proteus Mirabilis Hi4320
To Be Published
PubMed: search

(-) Compounds

Molecule 1 - UNIVERSAL STRESS PROTEIN E
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PMCSG7
    Expression System Strain: BL21
    Expression System Taxid: 511693
    Expression System Vector Type: PLASMID
    Gene: PMI1202, USPE
    Organism Scientific: PROTEUS MIRABILIS
    Organism Taxid: 529507
    Strain: HI4320

 Structural Features

(-) Chains, Units

  1
Asymmetric Unit : A
Biological Unit 1 (2x): A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (5, 10)

Asymmetric Unit (5, 10)
No.NameCountTypeFull Name
1ACT1Ligand/IonACETATE ION
2GOL2Ligand/IonGLYCEROL
3MSE5Mod. Amino AcidSELENOMETHIONINE
4PEG1Ligand/IonDI(HYDROXYETHYL)ETHER
5UNL1Ligand/IonUNKNOWN LIGAND
Biological Unit 1 (5, 20)
No.NameCountTypeFull Name
1ACT2Ligand/IonACETATE ION
2GOL4Ligand/IonGLYCEROL
3MSE10Mod. Amino AcidSELENOMETHIONINE
4PEG2Ligand/IonDI(HYDROXYETHYL)ETHER
5UNL2Ligand/IonUNKNOWN LIGAND

(-) Sites  (4, 4)

Asymmetric Unit (4, 4)
No.NameEvidenceResiduesDescription
1AC1SOFTWARETHR A:50 , LEU A:51 , LYS A:62 , ILE A:204 , ILE A:206 , ALA A:207 , ILE A:208 , HOH A:340 , HOH A:351BINDING SITE FOR RESIDUE GOL A 317
2AC2SOFTWARELEU A:269 , HOH A:323 , HOH A:367BINDING SITE FOR RESIDUE GOL A 318
3AC3SOFTWARETHR A:244 , HIS A:245 , LYS A:247 , GLU A:261 , HOH A:464 , HOH A:515BINDING SITE FOR RESIDUE PEG A 319
4AC4SOFTWAREALA A:202 , PRO A:203 , ASN A:205 , HOH A:379 , HOH A:509BINDING SITE FOR RESIDUE ACT A 320

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 3OLQ)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 3OLQ)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 3OLQ)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 3OLQ)

(-) Exons   (0, 0)

(no "Exon" information available for 3OLQ)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:306
 aligned with B4ETT2_PROMH | B4ETT2 from UniProtKB/TrEMBL  Length:316

    Alignment length:308
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301        
         B4ETT2_PROMH     2 EKYQNLLVVIDPNQDDQPALRRAVYIVQRNGGRIKAFLPVYDLSYDMTTLLSPDERNAMRKGVINQKTAWIKQQARYYLEAGIQIDIKVIWHNRPYEAIIEEVITDKHDLLIKMAHQHDKLGSLIFTPLDWQLLRKCPAPVWMVKDKEWPEYGTIVVAANLSNEESYHDALNLKLIELTNDLSHRIQKDPDVHLLSAYPVAPINIAIELPDFDPNLYNNALRGQHLIAMKELRQKFSIPEEKTHVKEGLPEQVIPQVCEELNAGIVVLGILGRTGLSAAFLGNTAEQLIDHIKCDLLAIKPDGFTCPI 309
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
           Pfam domains (1) -------------------------------------------------------------------------------------------------------------------------------------------------------Usp-3olqA01 A:153-301                                                                                                                                -------- Pfam domains (1)
           Pfam domains (2) -------------------------------------------------------------------------------------------------------------------------------------------------------Usp-3olqA02 A:153-301                                                                                                                                -------- Pfam domains (2)
         Sec.struct. author ....eeeee.......hhhhhhhhhhhhhhh.eeeeeeee.hhhhhh....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...eeeeeee..hhhhhhhhhhhhhh..eeeeee...--......hhhhhhhhhhh...eeeee........eeeee.......hhhhhhhhhhhhhhhhhhhhhh....eeeeeee..............hhhhhhhhhhhhhhhhhhhhhhhh..hhh.eeeee.hhhhhhhhhhhhh.eeeeeee.......hhhhhhhhhhhhhh....eeeee......... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3olq A   2 EKYQNLLVVIDPNQDDQPALRRAVYIVQRNGGRIKAFLPVYDLSYDmTTLLSPDERNAmRKGVINQKTAWIKQQARYYLEAGIQIDIKVIWHNRPYEAIIEEVITDKHDLLIKmAHQH--LGSLIFTPLDWQLLRKCPAPVWmVKDKEWPEYGTIVVAANLSNEESYHDALNLKLIELTNDLSHRIQKDPDVHLLSAYPVAPINIAIELPDFDPNLYNNALRGQHLIAmKELRQKFSIPEEKTHVKEGLPEQVIPQVCEELNAGIVVLGILGRTGLSAAFLGNTAEQLIDHIKCDLLAIKPDGFTCPI 309
                                    11        21        31        41      | 51        61        71        81        91       101       111   |   | -|      131       141  |    151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301        
                                                                         48-MSE      60-MSE                                                115-MSE  |                   144-MSE                                                                               230-MSE                                                                           
                                                                                                                                                  122
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 3OLQ)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 3OLQ)

(-) Pfam Domains  (1, 2)

Asymmetric Unit
(-)
Clan: HUP (230)

(-) Gene Ontology  (1, 1)

Asymmetric Unit(hide GO term definitions)
Chain A   (B4ETT2_PROMH | B4ETT2)
biological process
    GO:0006950    response to stress    Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation).

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 Related Entries

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        B4ETT2_PROMH | B4ETT2: 4wy2

(-) Related Entries Specified in the PDB File

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