3NYN - JenaLib

Asymmetric Unit (Jmol Viewer)

Asym. Unit - sites (Jmol Viewer)

Biological Unit 1 (Jmol Viewer)

Biol. Unit 1 - sites (Jmol Viewer)

Biological Unit 2 (Jmol Viewer)

Biological Unit 3 (Jmol Viewer)

Title :   CRYSTAL STRUCTURE OF G PROTEIN-COUPLED RECEPTOR KINASE 6 IN COMPLEX WITH SANGIVAMYCIN

Authors :   J. J. G. Tesmer, P. Singh

Date :   15 Jul 10 (Deposition) - 22 Sep 10 (Release) - 19 Jan 11 (Revision)

Method :   X-RAY DIFFRACTION

Resolution :   2.72

Chains :   Asym. Unit : A,B
Biol. Unit 1: A  (1x)
Biol. Unit 2: B  (1x)
Biol. Unit 3: A,B  (1x)

Keywords :   Kinase, Grk, Rgs Homology Domain, G Protein-Coupled Receptor Kinase, Transferase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   C. A. Boguth, P. Singh, C. C. Huang, J. J. Tesmer
Molecular Basis For Activation Of G Protein-Coupled Recepto Kinases.
Embo J. V. 29 3249 2010
PubMed-ID: 20729810 | Reference-DOI: 10.1038/EMBOJ.2010.206

Molecule 1 - G PROTEIN-COUPLED RECEPTOR KINASE 6
	Chains	:	A, B
	EC Number	:	2.7.11.16
	Engineered	:	YES
	Expression System	:	TRICHOPLUSIA NI
	Expression System Common	:	CABBAGE LOOPER
	Expression System Strain	:	HIGH-FIVE
	Expression System Taxid	:	7111
	Expression System Vector Type	:	BACULOVIRUS
	Gene	:	GPRK6, GRK6
	Organism Common	:	HUMAN
	Organism Scientific	:	HOMO SAPIENS
	Organism Taxid	:	9606
	Synonym	:	G PROTEIN-COUPLED RECEPTOR KINASE GRK6

		1	2
Asymmetric Unit	:	A	B
Biological Unit 1 (1x)	:	A
Biological Unit 2 (1x)	:		B
Biological Unit 3 (1x)	:	A	B

Summary Information (see also Sequences/Alignments below)

Asymmetric Unit (4, 20)

No.	Name	Count	Type	Full Name
1	ACE	2	Mod. Amino Acid	ACETYL GROUP
2	BU3	2	Ligand/Ion	(R,R)-2,3-BUTANEDIOL
3	SGV	2	Ligand/Ion	SANGIVAMYCIN
4	SO4	14	Ligand/Ion	SULFATE ION

Biological Unit 1 (4, 10)

No.	Name	Count	Type	Full Name
1	ACE	1	Mod. Amino Acid	ACETYL GROUP
2	BU3	1	Ligand/Ion	(R,R)-2,3-BUTANEDIOL
3	SGV	1	Ligand/Ion	SANGIVAMYCIN
4	SO4	7	Ligand/Ion	SULFATE ION

Biological Unit 2 (4, 10)

No.	Name	Count	Type	Full Name
1	ACE	1	Mod. Amino Acid	ACETYL GROUP
2	BU3	1	Ligand/Ion	(R,R)-2,3-BUTANEDIOL
3	SGV	1	Ligand/Ion	SANGIVAMYCIN
4	SO4	7	Ligand/Ion	SULFATE ION

Biological Unit 3 (4, 20)

No.	Name	Count	Type	Full Name
1	ACE	2	Mod. Amino Acid	ACETYL GROUP
2	BU3	2	Ligand/Ion	(R,R)-2,3-BUTANEDIOL
3	SGV	2	Ligand/Ion	SANGIVAMYCIN
4	SO4	14	Ligand/Ion	SULFATE ION

Asymmetric Unit (18, 18)

No.	Name	Evidence	Residues	Description
01	AC1	SOFTWARE	LEU A:192 , GLY A:193 , VAL A:200 , LYS A:215 , THR A:264 , MET A:266 , ASP A:270 , GLU A:315 , LEU A:318 , SER A:328 , ASP A:329 , HOH A:558	BINDING SITE FOR RESIDUE SGV A 577
02	AC2	SOFTWARE	SER A:27 , ARG A:187 , ARG A:206 , ACE B:1 , GLU B:2	BINDING SITE FOR RESIDUE SO4 A 578
03	AC3	SOFTWARE	PRO A:94 , ASP A:95 , ASN A:452 , LYS A:454 , ARG A:455	BINDING SITE FOR RESIDUE SO4 A 579
04	AC4	SOFTWARE	TRP A:30 , ARG A:31	BINDING SITE FOR RESIDUE SO4 A 580
05	AC5	SOFTWARE	LYS A:29 , ASN A:184 , ARG A:206	BINDING SITE FOR RESIDUE SO4 A 581
06	AC6	SOFTWARE	ARG A:59 , ASN A:242 , TRP B:539 , LYS B:540	BINDING SITE FOR RESIDUE SO4 A 582
07	AC7	SOFTWARE	TYR A:53 , CYS A:57 , ARG A:64	BINDING SITE FOR RESIDUE BU3 A 583
08	AC8	SOFTWARE	LYS A:272 , HIS A:277 , LYS A:475	BINDING SITE FOR RESIDUE SO4 A 584
09	AC9	SOFTWARE	LYS A:183 , THR A:255 , LYS A:256	BINDING SITE FOR RESIDUE SO4 A 585
10	BC1	SOFTWARE	ALA B:213 , LYS B:215 , LEU B:263 , THR B:264 , MET B:266 , ASP B:270 , GLU B:315 , LEU B:318 , ASP B:329 , HOH B:558	BINDING SITE FOR RESIDUE SGV B 577
11	BC2	SOFTWARE	ACE A:1 , GLU A:2 , SER B:27 , ARG B:187 , ARG B:206	BINDING SITE FOR RESIDUE SO4 B 578
12	BC3	SOFTWARE	PRO B:94 , ASP B:95 , ARG B:98 , ASN B:452 , ARG B:455	BINDING SITE FOR RESIDUE SO4 B 579
13	BC4	SOFTWARE	TRP B:30 , ARG B:31	BINDING SITE FOR RESIDUE SO4 B 580
14	BC5	SOFTWARE	LYS B:29 , ASN B:184 , ARG B:206	BINDING SITE FOR RESIDUE SO4 B 581
15	BC6	SOFTWARE	TRP A:539 , LYS A:540 , ARG B:59 , ASN B:242	BINDING SITE FOR RESIDUE SO4 B 582
16	BC7	SOFTWARE	TYR B:53 , CYS B:57 , GLU B:58 , ARG B:64 , ARG B:68	BINDING SITE FOR RESIDUE BU3 B 583
17	BC8	SOFTWARE	LYS B:272 , HIS B:277 , LYS B:475	BINDING SITE FOR RESIDUE SO4 B 584
18	BC9	SOFTWARE	LYS B:183 , THR B:255 , LYS B:256	BINDING SITE FOR RESIDUE SO4 B 585

(no "SS Bond" information available for 3NYN)

Asymmetric Unit

No.	Residues
1	Ala A:545	-	Pro A:546
2	Ala B:545	-	Pro B:546

Asymmetric Unit (3, 6)

								dbSNP	PDB
No.	Source	Variant ID	Variant			UniProt ID	Status	ID	Chain	Variant
1	UniProt	VAR_040524	R	31	Q	GRK6_HUMAN	Unclassified	141014084	A/B	R	31	Q
2	UniProt	VAR_040525	T	73	M	GRK6_HUMAN	Polymorphism	56382815	A/B	T	73	M
3	UniProt	VAR_040526	I	275	M	GRK6_HUMAN	Unclassified	---	A/B	I	275	M

SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)

Biological Unit 1 (3, 3)

								dbSNP	PDB
No.	Source	Variant ID	Variant			UniProt ID	Status	ID	Chain	Variant
1	UniProt	VAR_040524	R	31	Q	GRK6_HUMAN	Unclassified	141014084	A	R	31	Q
2	UniProt	VAR_040525	T	73	M	GRK6_HUMAN	Polymorphism	56382815	A	T	73	M
3	UniProt	VAR_040526	I	275	M	GRK6_HUMAN	Unclassified	---	A	I	275	M

SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)

Biological Unit 2 (3, 3)

								dbSNP	PDB
No.	Source	Variant ID	Variant			UniProt ID	Status	ID	Chain	Variant
1	UniProt	VAR_040524	R	31	Q	GRK6_HUMAN	Unclassified	141014084	B	R	31	Q
2	UniProt	VAR_040525	T	73	M	GRK6_HUMAN	Polymorphism	56382815	B	T	73	M
3	UniProt	VAR_040526	I	275	M	GRK6_HUMAN	Unclassified	---	B	I	275	M

SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)

Biological Unit 3 (3, 6)

								dbSNP	PDB
No.	Source	Variant ID	Variant			UniProt ID	Status	ID	Chain	Variant
1	UniProt	VAR_040524	R	31	Q	GRK6_HUMAN	Unclassified	141014084	A/B	R	31	Q
2	UniProt	VAR_040525	T	73	M	GRK6_HUMAN	Polymorphism	56382815	A/B	T	73	M
3	UniProt	VAR_040526	I	275	M	GRK6_HUMAN	Unclassified	---	A/B	I	275	M

SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)

Asymmetric Unit (4, 8)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	RGS	PS50132	RGS domain profile.	GRK6_HUMAN	59-171	2	A:59-171 B:59-171
2	PROTEIN_KINASE_ATP	PS00107	Protein kinases ATP-binding region signature.	GRK6_HUMAN	192-224	2	A:192-224 B:192-224
3	PROTEIN_KINASE_ST	PS00108	Serine/Threonine protein kinases active-site signature.	GRK6_HUMAN	307-319	2	A:307-319 B:307-319
4	AGC_KINASE_CTER	PS51285	AGC-kinase C-terminal domain profile.	GRK6_HUMAN	449-514	2	A:449-514 B:449-514

Biological Unit 1 (4, 4)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	RGS	PS50132	RGS domain profile.	GRK6_HUMAN	59-171	1	A:59-171 -
2	PROTEIN_KINASE_ATP	PS00107	Protein kinases ATP-binding region signature.	GRK6_HUMAN	192-224	1	A:192-224 -
3	PROTEIN_KINASE_ST	PS00108	Serine/Threonine protein kinases active-site signature.	GRK6_HUMAN	307-319	1	A:307-319 -
4	AGC_KINASE_CTER	PS51285	AGC-kinase C-terminal domain profile.	GRK6_HUMAN	449-514	1	A:449-514 -

Biological Unit 2 (4, 4)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	RGS	PS50132	RGS domain profile.	GRK6_HUMAN	59-171	1	- B:59-171
2	PROTEIN_KINASE_ATP	PS00107	Protein kinases ATP-binding region signature.	GRK6_HUMAN	192-224	1	- B:192-224
3	PROTEIN_KINASE_ST	PS00108	Serine/Threonine protein kinases active-site signature.	GRK6_HUMAN	307-319	1	- B:307-319
4	AGC_KINASE_CTER	PS51285	AGC-kinase C-terminal domain profile.	GRK6_HUMAN	449-514	1	- B:449-514

Biological Unit 3 (4, 8)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	RGS	PS50132	RGS domain profile.	GRK6_HUMAN	59-171	2	A:59-171 B:59-171
2	PROTEIN_KINASE_ATP	PS00107	Protein kinases ATP-binding region signature.	GRK6_HUMAN	192-224	2	A:192-224 B:192-224
3	PROTEIN_KINASE_ST	PS00108	Serine/Threonine protein kinases active-site signature.	GRK6_HUMAN	307-319	2	A:307-319 B:307-319
4	AGC_KINASE_CTER	PS51285	AGC-kinase C-terminal domain profile.	GRK6_HUMAN	449-514	2	A:449-514 B:449-514

Asymmetric Unit (15, 30)

	ENSEMBL					UniProtKB			PDB
No.	Transcript ID	Exon	Exon ID	Genome Location	Length	ID	Location	Length	Count	Location	Length
1.4a	ENST00000355472	4a	ENSE00002047192	chr5:176853679-176853898	220	GRK6_HUMAN	1-18	18	2	A:1-18 B:1-18	18 18
1.5b	ENST00000355472	5b	ENSE00000898139	chr5:176857873-176857968	96	GRK6_HUMAN	18-50	33	2	A:18-50 B:18-50	33 33
1.6b	ENST00000355472	6b	ENSE00000898138	chr5:176858996-176859108	113	GRK6_HUMAN	50-87	38	2	A:50-87 B:50-87	38 38
1.7b	ENST00000355472	7b	ENSE00001054992	chr5:176859234-176859311	78	GRK6_HUMAN	88-113	26	2	A:88-113 B:88-113	26 26
1.8	ENST00000355472	8	ENSE00001054998	chr5:176859707-176859807	101	GRK6_HUMAN	114-147	34	2	A:114-147 B:114-147	34 34
1.9b	ENST00000355472	9b	ENSE00000898134	chr5:176860148-176860240	93	GRK6_HUMAN	147-178	32	2	A:147-178 B:147-178	32 32
1.10	ENST00000355472	10	ENSE00001721473	chr5:176860348-176860411	64	GRK6_HUMAN	178-199	22	2	A:178-199 B:178-199	22 22
1.11	ENST00000355472	11	ENSE00001725586	chr5:176860537-176860677	141	GRK6_HUMAN	200-246	47	2	A:200-246 B:200-246	47 47
1.12b	ENST00000355472	12b	ENSE00000898131	chr5:176860915-176861105	191	GRK6_HUMAN	247-310	64	2	A:247-310 B:247-310	64 64
1.13	ENST00000355472	13	ENSE00000898130	chr5:176861903-176861940	38	GRK6_HUMAN	310-323	14	2	A:310-323 B:310-323	14 14
1.14	ENST00000355472	14	ENSE00000898129	chr5:176862033-176862122	90	GRK6_HUMAN	323-353	31	2	A:323-353 B:323-353	31 31
1.15b	ENST00000355472	15b	ENSE00001293713	chr5:176863074-176863282	209	GRK6_HUMAN	353-422	70	2	A:353-422 (gaps) B:353-422 (gaps)	70 70
1.16a	ENST00000355472	16a	ENSE00001310649	chr5:176863394-176863531	138	GRK6_HUMAN	423-468	46	2	A:423-468 B:423-468	46 46
1.17	ENST00000355472	17	ENSE00000828943	chr5:176867701-176867838	138	GRK6_HUMAN	469-514	46	2	A:469-514 B:469-514	46 46
1.18	ENST00000355472	18	ENSE00001054991	chr5:176867920-176868054	135	GRK6_HUMAN	515-559	45	2	A:515-557 B:515-557	43 43
1.20c	ENST00000355472	20c	ENSE00001515898	chr5:176868738-176869831	1094	GRK6_HUMAN	560-576	17	0	-	-

Asymmetric Unit

Reformat:	Number of residues per line = ('0' or empty: single-line sequence representation)
	Number of residues per labelling interval =
	UniProt sequence: complete aligned part

Show mapping:	SCOP domains	CATH domains	Pfam domains	Secondary structure (by author)
	SAPs(SNPs)	PROSITE motifs	Exons
	(details for a mapped element are shown in a popup box when the mouse pointer rests over it)

Chain A from PDB  Type:PROTEIN  Length:554
 aligned with GRK6_HUMAN | P43250 from UniProtKB/Swiss-Prot  Length:576

    Alignment length:557
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430       440       450       460       470       480       490       500       510       520       530       540       550       
           GRK6_HUMAN     1 MELENIVANTVLLKAREGGGGNRKGKSKKWRQMLQFPHISQCEELRLSLERDYHSLCERQPIGRLLFREFCATRPELSRCVAFLDGVAEYEVTPDDKRKACGRQLTQNFLSHTGPDLIPEVPRQLVTNCTQRLEQGPCKDLFQELTRLTHEYLSVAPFADYLDSIYFNRFLQWKWLERQPVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVPEEYSERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEHPLFKKLNFKRLGAGMLEPPFKPDPQAIYCKDVLDIEQFSTVKGVELEPTDQDFYQKFATGSVPIPWQNEMVETECFQELNVFGLDGSVPPDLDWKGQPPAPPKKGLLQRLFS 557
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhhhhhh.........hhhhhh....hhhhhhhhhhh..hhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh............hhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhh.eeeeeeeee....eeeeeee.....eeeeeeeehhhhhhhhhhhhhhhhhhhhhhh.......eeeeee...eeeeee......hhhhhhhh......hhhhhhhhhhhhhhhhhhhhhh.ee....hhh.eee.....eee......ee......ee.........hhhhhh..ee.hhhhhhhhhhhhhhhhhh.....---...hhhhhhhhhhh.........hhhhhhhhhhhh..hhhhh......hhhhhhhhhhhh..hhhhhhh.................................hhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhh.....................hhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ------------------------------Q-----------------------------------------M---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------M------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ----------------------------------------------------------RGS  PDB: A:59-171 UniProt: 59-171                                                                               --------------------PROTEIN_KINASE_ATP  PDB: A:192-22----------------------------------------------------------------------------------PROTEIN_KINAS---------------------------------------------------------------------------------------------------------------------------------AGC_KINASE_CTER  PDB: A:449-514 UniProt: 449-514                  ------------------------------------------- PROSITE
           Transcript 1 (1) Exon 1.4a         -------------------------------Exon 1.6b  PDB: A:50-87 UniProt: 50-87Exon 1.7b  PDB: A:88-113  Exon 1.8  PDB: A:114-147          ------------------------------Exon 1.10             Exon 1.11  PDB: A:200-246 UniProt: 200-246     Exon 1.12b  PDB: A:247-310 UniProt: 247-310                     ------------Exon 1.14  PDB: A:323-353      ---------------------------------------------------------------------Exon 1.16a  PDB: A:423-468 UniProt: 423-468   Exon 1.17  PDB: A:469-514 UniProt: 469-514    Exon 1.18  PDB: A:515-557 UniProt: 515-559  Transcript 1 (1)
           Transcript 1 (2) -----------------Exon 1.5b  PDB: A:18-50          ------------------------------------------------------------------------------------------------Exon 1.9b  PDB: A:147-178       -----------------------------------------------------------------------------------------------------------------------------------Exon 1.13     -----------------------------Exon 1.15b  PDB: A:353-422 (gaps) UniProt: 353-422                    --------------------------------------------------------------------------------------------------------------------------------------- Transcript 1 (2)
                 3nyn A   1 xELENIVANTVLLKAREGGGGNRKGKSKKWRQMLQFPHISQCEELRLSLERDYHSLCERQPIGRLLFREFCATRPELSRCVAFLDGVAEYEVTPDDKRKACGRQLTQNFLSHTGPDLIPEVPRQLVTNCTQRLEQGPCKDLFQELTRLTHEYLSVAPFADYLDSIYFNRFLQWKWLERQPVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQ---KKIKREEVERLVKEVPEEYSERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEHPLFKKLNFKRLGAGMLEPPFKPDPQAIYCKDVLDIEQFSTVKGVELEPTDQDFYQKFATGSVPIPWQNEMVETECFQELNVFGLDGSVPPDLDWKGQPPAPPKKGLLQRLFS 557
                            |       10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380     | 390       400       410       420       430       440       450       460       470       480       490       500       510       520       530       540       550       
                            |                                                                                                                                                                                                                                                                                                                                                                                              386 390                                                                                                                                                                       
                            1-ACE

Chain B from PDB  Type:PROTEIN  Length:554
 aligned with GRK6_HUMAN | P43250 from UniProtKB/Swiss-Prot  Length:576

    Alignment length:557
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430       440       450       460       470       480       490       500       510       520       530       540       550       
           GRK6_HUMAN     1 MELENIVANTVLLKAREGGGGNRKGKSKKWRQMLQFPHISQCEELRLSLERDYHSLCERQPIGRLLFREFCATRPELSRCVAFLDGVAEYEVTPDDKRKACGRQLTQNFLSHTGPDLIPEVPRQLVTNCTQRLEQGPCKDLFQELTRLTHEYLSVAPFADYLDSIYFNRFLQWKWLERQPVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVPEEYSERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEHPLFKKLNFKRLGAGMLEPPFKPDPQAIYCKDVLDIEQFSTVKGVELEPTDQDFYQKFATGSVPIPWQNEMVETECFQELNVFGLDGSVPPDLDWKGQPPAPPKKGLLQRLFS 557
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
           Pfam domains (1) ---------------------------------------------------RGS-3nynB03 B:52-170                                                                                                   ---------------Pkinase-3nynB01 B:186-448                                                                                                                                                                                                                                              ------------------------------------------------------------------------------------------------------------- Pfam domains (1)
           Pfam domains (2) ---------------------------------------------------RGS-3nynB04 B:52-170                                                                                                   ---------------Pkinase-3nynB02 B:186-448                                                                                                                                                                                                                                              ------------------------------------------------------------------------------------------------------------- Pfam domains (2)
         Sec.struct. author .hhhhhhhhhhhhhhhhh..........hhhhhh...hhhhhhhhhhhh..hhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh............hhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...hhh.eeeeeeeee....eeeeeee.....eeeeeeeehhhhhhhhhhhhhhhhhhhhhhh.......eeeeee...eeeeeee.....hhhhhhhh......hhhhhhhhhhhhhhhhhhhhh..ee....hhh.eee.....eee......ee......ee.........hhhhhh..ee.hhhhhhhhhhhhhhhhhh.....---...hhhhhhhhhhh.........hhhhhhhhhhhh.............hhhhhhhhhhhh..hhhhhh..................................hhhhhhhhhhhh.eehhhhhhhhhhhhhhhhhhhh.....................hhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ------------------------------Q-----------------------------------------M---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------M------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ----------------------------------------------------------RGS  PDB: B:59-171 UniProt: 59-171                                                                               --------------------PROTEIN_KINASE_ATP  PDB: B:192-22----------------------------------------------------------------------------------PROTEIN_KINAS---------------------------------------------------------------------------------------------------------------------------------AGC_KINASE_CTER  PDB: B:449-514 UniProt: 449-514                  ------------------------------------------- PROSITE
           Transcript 1 (1) Exon 1.4a         -------------------------------Exon 1.6b  PDB: B:50-87 UniProt: 50-87Exon 1.7b  PDB: B:88-113  Exon 1.8  PDB: B:114-147          ------------------------------Exon 1.10             Exon 1.11  PDB: B:200-246 UniProt: 200-246     Exon 1.12b  PDB: B:247-310 UniProt: 247-310                     ------------Exon 1.14  PDB: B:323-353      ---------------------------------------------------------------------Exon 1.16a  PDB: B:423-468 UniProt: 423-468   Exon 1.17  PDB: B:469-514 UniProt: 469-514    Exon 1.18  PDB: B:515-557 UniProt: 515-559  Transcript 1 (1)
           Transcript 1 (2) -----------------Exon 1.5b  PDB: B:18-50          ------------------------------------------------------------------------------------------------Exon 1.9b  PDB: B:147-178       -----------------------------------------------------------------------------------------------------------------------------------Exon 1.13     -----------------------------Exon 1.15b  PDB: B:353-422 (gaps) UniProt: 353-422                    --------------------------------------------------------------------------------------------------------------------------------------- Transcript 1 (2)
                 3nyn B   1 xELENIVANTVLLKAREGGGGNRKGKSKKWRQMLQFPHISQCEELRLSLERDYHSLCERQPIGRLLFREFCATRPELSRCVAFLDGVAEYEVTPDDKRKACGRQLTQNFLSHTGPDLIPEVPRQLVTNCTQRLEQGPCKDLFQELTRLTHEYLSVAPFADYLDSIYFNRFLQWKWLERQPVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQ---KKIKREEVERLVKEVPEEYSERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEHPLFKKLNFKRLGAGMLEPPFKPDPQAIYCKDVLDIEQFSTVKGVELEPTDQDFYQKFATGSVPIPWQNEMVETECFQELNVFGLDGSVPPDLDWKGQPPAPPKKGLLQRLFS 557
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                            1-ACE                                                                                                                                                                                                                                                                                                                                                                                          386 390

Legend:		→ Mismatch	(orange background)
	-	→ Gap	(green background, '-', border residues have a numbering label)
		→ Modified Residue	(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
	x	→ Chemical Group	(purple background, 'x', labelled with number + name, e.g. ACE or NH2)
	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '\|'

(no "SCOP Domain" information available for 3NYN)

(no "CATH Domain" information available for 3NYN)

Asymmetric Unit

Clans(

)

Families(

)

Organisms( (-)

)

Clan: PKinase (934)

Family: Pkinase (680)

Homo sapiens (Human) (521)

1a	Pkinase-3nynB01	B:186-448
1b	Pkinase-3nynB02	B:186-448

Clan: RGS (17)

Family: RGS (16)

Homo sapiens (Human) (9)

2a	RGS-3nynB03	B:52-170
2b	RGS-3nynB04	B:52-170

Asymmetric Unit(hide GO term definitions)

Chain A,B (GRK6_HUMAN | P43250)

molecular function
	GO:0005524	ATP binding	Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
	GO:0004703	G-protein coupled receptor kinase activity	Catalysis of the reaction: ATP + G-protein coupled receptor = ADP + G-protein coupled receptor phosphate.
	GO:0047696	beta-adrenergic receptor kinase activity	Catalysis of the reaction: ATP + beta-adrenergic receptor = ADP + phospho-beta-adrenergic receptor.
	GO:0016301	kinase activity	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule.
	GO:0000166	nucleotide binding	Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose.
	GO:0005515	protein binding	Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
	GO:0004672	protein kinase activity	Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP.
	GO:0004674	protein serine/threonine kinase activity	Catalysis of the reactions: ATP + protein serine = ADP + protein serine phosphate, and ATP + protein threonine = ADP + protein threonine phosphate.
	GO:0016740	transferase activity	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2.
biological process
	GO:0016055	Wnt signaling pathway	The series of molecular signals initiated by binding of a Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state.
	GO:0002029	desensitization of G-protein coupled receptor protein signaling pathway	The process that stops, prevents, or reduces the frequency, rate or extent of G-protein coupled receptor protein signaling pathway activity after prolonged stimulation with an agonist of the pathway.
	GO:0010360	negative regulation of anion channel activity	Any process that stops, prevents, or reduces the frequency, rate, or extent of the anion channel activity.
	GO:0016310	phosphorylation	The process of introducing a phosphate group into a molecule, usually with the formation of a phosphoric ester, a phosphoric anhydride or a phosphoric amide.
	GO:0006468	protein phosphorylation	The process of introducing a phosphate group on to a protein.
	GO:0008277	regulation of G-protein coupled receptor protein signaling pathway	Any process that modulates the frequency, rate or extent of G-protein coupled receptor protein signaling pathway activity.
	GO:0007165	signal transduction	The cellular process in which a signal is conveyed to trigger a change in the activity or state of a cell. Signal transduction begins with reception of a signal (e.g. a ligand binding to a receptor or receptor activation by a stimulus such as light), or for signal transduction in the absence of ligand, signal-withdrawal or the activity of a constitutively active receptor. Signal transduction ends with regulation of a downstream cellular process, e.g. regulation of transcription or regulation of a metabolic process. Signal transduction covers signaling from receptors located on the surface of the cell and signaling via molecules located within the cell. For signaling between cells, signal transduction is restricted to events at and within the receiving cell.
cellular component
	GO:0005829	cytosol	The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
	GO:0016020	membrane	A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
	GO:0005886	plasma membrane	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins.

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	Cis Peptide Bonds
		Ala A:545 - Pro A:546	[ RasMol ]
		Ala B:545 - Pro B:546	[ RasMol ]

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	3nyn
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	GRK6_HUMAN \| P43250
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	2.7.11.16
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UniProtKB/Swiss-Prot
	GRK6_HUMAN \| P43250	:	2acx 3nyo

2acx	GRK6 IN A MORE OPEN CONFORMATION
3nyo	GRK6 IN A SIMILAR CONFORMATION IN COMPLEX WITH AMP

Description

Compounds

Structural Features

Chains, Units

Ligands, Modified Residues, Ions (4, 20)

Sites (18, 18)

SS Bonds (0, 0)

Cis Peptide Bonds (2, 2)

Sequence-Structure Mapping

SAPs(SNPs)/Variants (3, 6)

PROSITE Motifs (4, 8)

Exons (15, 30)

Sequences/Alignments

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SCOP Domains (0, 0)

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Pfam Domains (2, 4)

Gene Ontology (19, 19)

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