3NGK - JenaLib

Title :   PDUA FROM SALMONELLA ENTERICA TYPHIMURIUM

Authors :   C. S. Crowley, D. Cascio, M. R. Sawaya, T. O. Yeates

Date :   11 Jun 10 (Deposition) - 06 Oct 10 (Release) - 08 Dec 10 (Revision)

Method :   X-RAY DIFFRACTION

Resolution :   2.26

Chains :   Asym. Unit : A
Biol. Unit 1: A  (6x)

Keywords :   Bmc Shell Protein, Pdu, Carboxysome, Propanediol, Unknown Function (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   C. S. Crowley, D. Cascio, M. R. Sawaya, J. S. Kopstein, T. A. Bobik, T. O. Yeates
Structural Insight Into The Mechanisms Of Transport Across The Salmonella Enterica Pdu Microcompartment Shell.
J. Biol. Chem. V. 285 37838 2010
PubMed-ID: 20870711 | Reference-DOI: 10.1074/JBC.M110.160580

Compounds

Molecule 1 - PROPANEDIOL UTILIZATION PROTEIN PDUA
	Chains	:	A
	Engineered	:	YES
	Expression System	:	ESCHERICHIA COLI
	Expression System Plasmid	:	PET22B
	Expression System Strain	:	BL21(DE3)
	Expression System Taxid	:	469008
	Expression System Vector Type	:	PLASMID
	Gene	:	PDUA, STM2038
	Organism Scientific	:	SALMONELLA ENTERICA SUBSP. ENTERICA SEROVAR TYPHIMURIUM
	Organism Taxid	:	90371

Structural Features

Chains, Units

Ligands, Modified Residues, Ions (0, 0)

Sites (0, 0)

SS Bonds (0, 0)

Cis Peptide Bonds (0, 0)

Sequence-Structure Mapping

SAPs(SNPs)/Variants (0, 0)

PROSITE Motifs (1, 1)

Exons (0, 0)

Sequences/Alignments

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Chain A from PDB  Type:PROTEIN  Length:89
 aligned with PDUA_SALTY | P0A1C7 from UniProtKB/Swiss-Prot  Length:94

    Alignment length:89
                                    13        23        33        43        53        63        73        83         
            PDUA_SALTY    4 EALGMVETKGLTAAIEAADAMVKSANVMLVGYEKIGSGLVTVIVRGDVGAVKAATDAGAAAARNVGEVKAVHVIPRPHTDVEKILPKGI 92
               SCOP domains d3ngka_ A: automated matches                                                              SCOP domains
               CATH domains ----------------------------------------------------------------------------------------- CATH domains
               Pfam domains BMC-3ngkA01 A:4-80                                                           ------------ Pfam domains
         Sec.struct. author .eeeeeeeehhhhhhhhhhhhhhhh..eeeeeee....eeeeeeeehhhhhhhhhhhhhhhhhhhheeeeeeee...hhhhhh...... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------BACT_MICROCOMP      --------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------- Transcript
                  3ngk A  4 EALGMVETKGLTAAIEAADAMVKSANVMLVGYEKIGSGLVTVIVRGDVGAVKAATDAGAAAARNVGEVKAVHVIPRPHTDVEKILPKGI 92
                                    13        23        33        43        53        63        73        83

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	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '\|'

Classification and Annotation

SCOP Domains (1, 1)

CATH Domains (0, 0)

Pfam Domains (1, 1)

Gene Ontology (0, 0)

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Description