3N8H - JenaLib

Asymmetric Unit (9, 9)

No.	Name	Evidence	Residues	Description
1	AC1	SOFTWARE	MSE A:29 , GLN A:60 , ARG A:121 , HIS A:124 , ASP A:150 , GLN A:153 , ARG A:187 , AMP A:270 , GOL A:272 , HOH A:411	BINDING SITE FOR RESIDUE PRO A 271
2	AC2	SOFTWARE	MSE B:29 , GLN B:60 , ARG B:121 , HIS B:124 , ASP B:150 , GLN B:153 , AMP B:270 , GOL B:272 , HOH B:281	BINDING SITE FOR RESIDUE PRO B 271
3	AC3	SOFTWARE	PRO A:27 , MSE A:29 , HIS A:33 , GLY A:35 , HIS A:36 , LEU A:39 , LEU A:146 , GLY A:147 , LYS A:149 , ASP A:150 , PRO A:174 , THR A:175 , GLN A:176 , LEU A:184 , PRO A:271 , GOL A:272 , HOH A:282 , HOH A:309 , HOH A:356 , HOH A:383 , HOH A:384 , HOH A:385 , HOH A:411	BINDING SITE FOR RESIDUE AMP A 270
4	AC4	SOFTWARE	PRO A:27 , THR A:28 , MSE A:29 , GLN A:60 , MSE A:128 , VAL A:131 , GLN A:153 , AMP A:270 , PRO A:271 , HOH A:380	BINDING SITE FOR RESIDUE GOL A 272
5	AC5	SOFTWARE	ASN A:34 , GLN A:178 , HOH A:302 , ASN B:34 , PRO B:179	BINDING SITE FOR RESIDUE GOL A 273
6	AC6	SOFTWARE	PRO A:58 , PHE A:61 , TYR A:67	BINDING SITE FOR RESIDUE ACY A 275
7	AC7	SOFTWARE	PRO B:27 , MSE B:29 , HIS B:33 , GLY B:35 , HIS B:36 , LEU B:39 , LEU B:146 , GLY B:147 , LYS B:149 , ASP B:150 , PRO B:174 , THR B:175 , GLN B:176 , LEU B:184 , PRO B:271 , GOL B:272 , HOH B:273 , HOH B:274 , HOH B:280 , HOH B:281 , HOH B:305 , HOH B:404 , HOH B:405	BINDING SITE FOR RESIDUE AMP B 270
8	AC8	SOFTWARE	GLN B:60 , MSE B:128 , VAL B:131 , GLN B:153 , AMP B:270 , PRO B:271 , HOH B:320	BINDING SITE FOR RESIDUE GOL B 272
9	AC9	SOFTWARE	HOH A:405 , THR B:175 , GLN B:176 , ARG B:177 , SER B:260 , CYS B:261 , HOH B:370	BINDING SITE FOR RESIDUE GOL B 275

SS Bonds (0, 0)

Cis Peptide Bonds (0, 0)

Sequence-Structure Mapping

SAPs(SNPs)/Variants (0, 0)

PROSITE Motifs (0, 0)

Exons (0, 0)

Sequences/Alignments

Asymmetric/Biological Unit

Reformat:	Number of residues per line = ('0' or empty: single-line sequence representation)
	Number of residues per labelling interval =
	UniProt sequence: complete aligned part

Show mapping:	SCOP domains	CATH domains	Pfam domains	Secondary structure (by author)
	SAPs(SNPs)	PROSITE motifs	Exons
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Chain A from PDB  Type:PROTEIN  Length:263
 aligned with PANC_FRATT | Q5NF57 from UniProtKB/Swiss-Prot  Length:261

    Alignment length:263
                             1                                                                                                                                                                                                                                                                 261 
                             |       9        19        29        39        49        59        69        79        89        99       109       119       129       139       149       159       169       179       189       199       209       219       229       239       249       259 | 
           PANC_FRATT     - -MIIADNIKQFHSIRNSLIKQQKIGFVPTMGALHNGHISLIKKAKSENDVVIVSIFVNPTQFNNPNDYQTYPNQLQQDIQILASLDVDVLFNPSEKDIYPDGNLLRIEPKLEIANILEGKSRPGHFSGMLTVVLKLLQITKPNNLYLGEKDYQQVMLIKQLVKDFFINTKIIVCPTQRQPSGLPLSSRNKNLTSTDIEIANKIYEILRQDDFSNLEELTNKINSTGAKLQYIQKLNNRIFLAFYIGKVRLIDNFLKETGPSC-   -
               SCOP domains d3n8ha_ A: automated matches                                                                                                                                                                                                                                            SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eee.hhhhhhhhhhh......eeeeee....hhhhhhhhhhhhhhh.eeeeee..hhhhh.hhhhhhhh..hhhhhhhhhhhh...eee..hhhhhh.....eeeee.hhhhhhhhhhhh.hhhhhhhhhhhhhhhhhh..eeeee..hhhhhhhhhhhhhhh....eeeee...........hhhhhhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhh...eeeeeeee..eeeeeeee..eeeeeeee........ Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3n8h A   0 AmIIADNIKQFHSIRNSLIKQQKIGFVPTmGALHNGHISLIKKAKSENDVVIVSIFVNPTQFNNPNDYQTYPNQLQQDIQILASLDVDVLFNPSEKDIYPDGNLLRIEPKLEIANILEGKSRPGHFSGmLTVVLKLLQITKPNNLYLGEKDYQQVmLIKQLVKDFFINTKIIVCPTQRQPSGLPLSSRNKNLTSTDIEIANKIYEILRQDDFSNLEELTNKINSTGAKLQYIQKLNNRIFLAFYIGKVRLIDNFLKETGPSCP 271
                             |       9        19        29        39        49        59        69        79        89        99       109       119       129       139       149     | 159       169       179       189       199       209       219       229       239       249       259 ||
                             |                          29-MSE                                                                                            128-MSE                    155-MSE                                                                                                   261|
                             1-MSE                                                                                                                                                                                                                                                              271

Chain B from PDB  Type:PROTEIN  Length:263
 aligned with PANC_FRATT | Q5NF57 from UniProtKB/Swiss-Prot  Length:261

    Alignment length:263
                             1                                                                                                                                                                                                                                                                 261 
                             |       9        19        29        39        49        59        69        79        89        99       109       119       129       139       149       159       169       179       189       199       209       219       229       239       249       259 | 
           PANC_FRATT     - -MIIADNIKQFHSIRNSLIKQQKIGFVPTMGALHNGHISLIKKAKSENDVVIVSIFVNPTQFNNPNDYQTYPNQLQQDIQILASLDVDVLFNPSEKDIYPDGNLLRIEPKLEIANILEGKSRPGHFSGMLTVVLKLLQITKPNNLYLGEKDYQQVMLIKQLVKDFFINTKIIVCPTQRQPSGLPLSSRNKNLTSTDIEIANKIYEILRQDDFSNLEELTNKINSTGAKLQYIQKLNNRIFLAFYIGKVRLIDNFLKETGPSC-   -
               SCOP domains d3n8hb_ B: automated matches                                                                                                                                                                                                                                            SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
           Pfam domains (1) -Pantoate_ligase-3n8hB01 B:1-214                                                                                                                                                                                       ------------------------------------------------ Pfam domains (1)
           Pfam domains (2) -Pantoate_ligase-3n8hB02 B:1-214                                                                                                                                                                                       ------------------------------------------------ Pfam domains (2)
         Sec.struct. author ..eee.hhhhhhhhhhh......eeeeee....hhhhhhhhhhhhhhh.eeeeee..hhhhh.hhhhhhh...hhhhhhhhhhhh...eee..hhhhhh.....eeeee.hhhhhhhhhhhh.hhhhhhhhhhhhhhhhhh..eeeee..hhhhhhhhhhhhhhh....eeeee...........hhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhh...eeeeeeee..eeeeeeee..eeeeeeee........ Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3n8h B   0 AmIIADNIKQFHSIRNSLIKQQKIGFVPTmGALHNGHISLIKKAKSENDVVIVSIFVNPTQFNNPNDYQTYPNQLQQDIQILASLDVDVLFNPSEKDIYPDGNLLRIEPKLEIANILEGKSRPGHFSGmLTVVLKLLQITKPNNLYLGEKDYQQVmLIKQLVKDFFINTKIIVCPTQRQPSGLPLSSRNKNLTSTDIEIANKIYEILRQDDFSNLEELTNKINSTGAKLQYIQKLNNRIFLAFYIGKVRLIDNFLKETGPSCP 271
                             |       9        19        29        39        49        59        69        79        89        99       109       119       129       139       149     | 159       169       179       189       199       209       219       229       239       249       259 ||
                             |                          29-MSE                                                                                            128-MSE                    155-MSE                                                                                                   261|
                             1-MSE                                                                                                                                                                                                                                                              271

Legend:		→ Mismatch	(orange background)
	-	→ Gap	(green background, '-', border residues have a numbering label)
		→ Modified Residue	(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
	x	→ Chemical Group	(purple background, 'x', labelled with number + name, e.g. ACE or NH2)
	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '\|'

Classification and Annotation

SCOP Domains (1, 2)

CATH Domains (0, 0)

Pfam Domains (1, 2)

Gene Ontology (8, 8)

Asymmetric/Biological Unit(hide GO term definitions)

Chain A,B (PANC_FRATT | Q5NF57)

molecular function
	GO:0005524	ATP binding	Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
	GO:0003824	catalytic activity	Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
	GO:0016874	ligase activity	Catalysis of the joining of two substances, or two groups within a single molecule, with the concomitant hydrolysis of the diphosphate bond in ATP or a similar triphosphate.
	GO:0000166	nucleotide binding	Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose.
	GO:0004592	pantoate-beta-alanine ligase activity	Catalysis of the reaction: ATP + (R)-pantoate + beta-alanine = AMP + diphosphate + (R)-pantothenate.
biological process
	GO:0009058	biosynthetic process	The chemical reactions and pathways resulting in the formation of substances; typically the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones.
	GO:0015940	pantothenate biosynthetic process	The chemical reactions and pathways resulting in the formation of pantothenate, the anion of pantothenic acid. It is a B complex vitamin that is a constituent of coenzyme A and is distributed ubiquitously in foods.
cellular component
	GO:0005737	cytoplasm	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.

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	Cis Peptide Bonds
(no "Cis Peptide Bonds" information available for 3n8h)

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	3n8h
		Family and Domain Information	:	ProDom \| SYSTERS
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	PANC_FRATT \| Q5NF57
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	6.3.2.1
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Description

Compounds

Structural Features

Chains, Units

Ligands, Modified Residues, Ions (5, 17)

Sites (9, 9)