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(-) Description

Title :  CRYSTAL STRUCTURE OF THE ECTODOMAIN COMPLEX OF THE CGRP RECEPTOR, A CLASS-B GPCR, REVEALS THE SITE OF DRUG ANTAGONISM
 
Authors :  E. Ter Haar
Date :  27 May 10  (Deposition) - 15 Sep 10  (Release) - 22 Sep 10  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.80
Chains :  Asym. Unit :  A,B,C,D,E,F,J,R
Biol. Unit 1:  A,R  (1x)
Biol. Unit 2:  B,D  (1x)
Biol. Unit 3:  C,F  (1x)
Biol. Unit 4:  E,J  (1x)
Keywords :  Gpcr, Class B Gpcr, Antagonist, Olcegepant, Telcagepant, Migraine, Membrane Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google))
 
Reference :  E. Ter Haar, C. M. Koth, N. Abdul-Manan, L. Swenson, J. T. Coll, J. A. Lippke, C. A. Lepre, M. Garcia-Guzman, J. M. Moore
Crystal Structure Of The Ectodomain Complex Of The Cgrp Receptor, A Class-B Gpcr, Reveals The Site Of Drug Antagonism.
Structure V. 18 1083 2010
PubMed-ID: 20826335  |  Reference-DOI: 10.1016/J.STR.2010.05.014

(-) Compounds

Molecule 1 - CALCITONIN GENE-RELATED PEPTIDE TYPE 1 RECEPTOR
    ChainsA, B, C, J
    EngineeredYES
    Expression SystemESCHERICHIA COLI
    Expression System PlasmidPET28B
    Expression System StrainROSETTA DE3
    Expression System Taxid562
    Expression System Vector TypePLASMID
    FragmentUNP RESIDUES 23-133
    GeneCALCRL, CALRL_HUMAN, CGRPR
    Organism CommonHUMAN
    Organism ScientificHOMO SAPIENS
    Organism Taxid9606
    SynonymCGRP TYPE 1 RECEPTOR, CALCITONIN RECEPTOR-LIKE RECEPTOR
 
Molecule 2 - RECEPTOR ACTIVITY-MODIFYING PROTEIN 1
    ChainsD, E, F, R
    EngineeredYES
    Expression SystemESCHERICHIA COLI
    Expression System PlasmidPET28B
    Expression System StrainROSETTA DE3
    Expression System Taxid562
    Expression System Vector TypePLASMID
    FragmentEXTRA-CELLULAR DOMAIN RESIDUES 26-117
    GeneRAMP1, RAMP1_HUMAN
    Organism CommonHUMAN
    Organism ScientificHOMO SAPIENS
    Organism Taxid9606
    SynonymCALCITONIN-RECEPTOR-LIKE RECEPTOR ACTIVITY-MODIFYING PROTEIN 1, CRLR ACTIVITY-MODIFYING PROTEIN 1

 Structural Features

(-) Chains, Units

  12345678
Asymmetric Unit ABCDEFJR
Biological Unit 1 (1x)A      R
Biological Unit 2 (1x) B D    
Biological Unit 3 (1x)  C  F  
Biological Unit 4 (1x)    E J 

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (2, 28)

Asymmetric Unit (2, 28)
No.NameCountTypeFull Name
1MSE12Mod. Amino AcidSELENOMETHIONINE
2SO416Ligand/IonSULFATE ION
Biological Unit 1 (2, 9)
No.NameCountTypeFull Name
1MSE3Mod. Amino AcidSELENOMETHIONINE
2SO46Ligand/IonSULFATE ION
Biological Unit 2 (2, 9)
No.NameCountTypeFull Name
1MSE3Mod. Amino AcidSELENOMETHIONINE
2SO46Ligand/IonSULFATE ION
Biological Unit 3 (1, 3)
No.NameCountTypeFull Name
1MSE3Mod. Amino AcidSELENOMETHIONINE
2SO4-1Ligand/IonSULFATE ION
Biological Unit 4 (2, 7)
No.NameCountTypeFull Name
1MSE3Mod. Amino AcidSELENOMETHIONINE
2SO44Ligand/IonSULFATE ION

(-) Sites  (16, 16)

Asymmetric Unit (16, 16)
No.NameEvidenceResiduesDescription
01AC1SOFTWAREASP A:70 , TRP A:72 , THR A:120 , TRP A:121 , THR A:122 , TYR A:124BINDING SITE FOR RESIDUE SO4 A 5
02AC2SOFTWAREARG A:113 , ASN D:86 , ALA D:87BINDING SITE FOR RESIDUE SO4 A 16
03AC3SOFTWARECYS A:74 , TRP A:75 , ASN A:76 , GLN A:86BINDING SITE FOR RESIDUE SO4 A 17
04AC4SOFTWAREARG B:119 , TRP B:121 , GLY D:116BINDING SITE FOR RESIDUE SO4 B 3
05AC5SOFTWAREARG B:119 , THR B:120 , THR B:122 , TYR B:124BINDING SITE FOR RESIDUE SO4 B 12
06AC6SOFTWAREARG B:113 , ASN R:86 , ALA R:87BINDING SITE FOR RESIDUE SO4 B 15
07AC7SOFTWAREPRO D:105 , ILE D:106 , SER D:107 , GLY D:108BINDING SITE FOR RESIDUE SO4 D 2
08AC8SOFTWAREALA D:70 , ASP D:71 , TRP D:74 , TRP D:84 , HOH D:124 , VAL R:111 , ARG R:112BINDING SITE FOR RESIDUE SO4 D 11
09AC9SOFTWAREARG D:64 , GLU D:68 , ARG R:61BINDING SITE FOR RESIDUE SO4 D 19
10BC1SOFTWARETRP E:84 , PRO E:85 , ASP J:70 , GLY J:71 , TRP J:72BINDING SITE FOR RESIDUE SO4 E 4
11BC2SOFTWAREALA E:70 , ASP E:71 , TRP E:74 , MSE J:42BINDING SITE FOR RESIDUE SO4 E 20
12BC3SOFTWAREARG J:119 , THR J:120 , TRP J:121 , THR J:122 , TYR J:124BINDING SITE FOR RESIDUE SO4 J 1
13BC4SOFTWAREHIS J:114 , TRP J:121BINDING SITE FOR RESIDUE SO4 J 14
14BC5SOFTWAREPRO R:105 , ILE R:106 , SER R:107 , GLY R:108BINDING SITE FOR RESIDUE SO4 R 1
15BC6SOFTWAREVAL D:111 , ARG D:112 , ALA R:70 , ASP R:71 , TRP R:74 , TRP R:84 , HOH R:124BINDING SITE FOR RESIDUE SO4 R 13
16BC7SOFTWARETRP A:121 , PRO R:115 , GLY R:116 , SER R:117BINDING SITE FOR RESIDUE SO4 R 18

(-) SS Bonds  (22, 22)

Asymmetric Unit
No.Residues
1A:48 -A:74
2A:65 -A:105
3A:88 -A:127
4B:48 -B:74
5B:65 -B:105
6B:88 -B:127
7C:48 -C:74
8D:27 -D:82
9D:40 -D:72
10D:57 -D:104
11E:27 -E:82
12E:40 -E:72
13E:57 -E:104
14F:27 -F:82
15F:40 -F:72
16F:57 -F:104
17J:48 -J:74
18J:65 -J:105
19J:88 -J:127
20R:27 -R:82
21R:40 -R:72
22R:57 -R:104

(-) Cis Peptide Bonds  (4, 4)

Asymmetric Unit
No.Residues
1Trp D:84 -Pro D:85
2Trp E:84 -Pro E:85
3Trp F:84 -Pro F:85
4Trp R:84 -Pro R:85

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 3N7P)

(-) PROSITE Motifs  (2, 8)

Asymmetric Unit (2, 8)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1G_PROTEIN_RECEP_F2_3PS50227 G-protein coupled receptors family 2 profile 1.CALRL_HUMAN47-131
 
 
 
  4A:47-128
B:47-129
C:47-124
J:47-128
2G_PROTEIN_RECEP_F2_1PS00649 G-protein coupled receptors family 2 signature 1.CALRL_HUMAN65-89
 
 
 
  4A:65-89
B:65-89
C:66-89
J:65-89
Biological Unit 1 (2, 2)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1G_PROTEIN_RECEP_F2_3PS50227 G-protein coupled receptors family 2 profile 1.CALRL_HUMAN47-131
 
 
 
  1A:47-128
-
-
-
2G_PROTEIN_RECEP_F2_1PS00649 G-protein coupled receptors family 2 signature 1.CALRL_HUMAN65-89
 
 
 
  1A:65-89
-
-
-
Biological Unit 2 (2, 2)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1G_PROTEIN_RECEP_F2_3PS50227 G-protein coupled receptors family 2 profile 1.CALRL_HUMAN47-131
 
 
 
  1-
B:47-129
-
-
2G_PROTEIN_RECEP_F2_1PS00649 G-protein coupled receptors family 2 signature 1.CALRL_HUMAN65-89
 
 
 
  1-
B:65-89
-
-
Biological Unit 3 (2, 2)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1G_PROTEIN_RECEP_F2_3PS50227 G-protein coupled receptors family 2 profile 1.CALRL_HUMAN47-131
 
 
 
  1-
-
C:47-124
-
2G_PROTEIN_RECEP_F2_1PS00649 G-protein coupled receptors family 2 signature 1.CALRL_HUMAN65-89
 
 
 
  1-
-
C:66-89
-
Biological Unit 4 (2, 2)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1G_PROTEIN_RECEP_F2_3PS50227 G-protein coupled receptors family 2 profile 1.CALRL_HUMAN47-131
 
 
 
  1-
-
-
J:47-128
2G_PROTEIN_RECEP_F2_1PS00649 G-protein coupled receptors family 2 signature 1.CALRL_HUMAN65-89
 
 
 
  1-
-
-
J:65-89

(-) Exons   (0, 0)

(no "Exon" information available for 3N7P)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it)
Chain A from PDB  Type:PROTEIN  Length:100
 aligned with CALRL_HUMAN | Q16602 from UniProtKB/Swiss-Prot  Length:461

    Alignment length:100
                                    38        48        58        68        78        88        98       108       118       128
          CALRL_HUMAN    29 EDSIQLGVTRNKIMTAQYECYQKIMQDPIQQAEGVYCNRTWDGWLCWNDVAAGTESMQLCPDYFQDFDPSEKVTKICDQDGNWFRHPASNRTWTNYTQCN 128
               SCOP domains ---------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ......hhhhhhhhhhhhhhhhhhh..........ee..ee....ee..ee..eeeeee............eeeeee....................... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (1) ------------------G_PROTEIN_RECEP_F2_3  PDB: A:47-128 UniProt: 47-131                                PROSITE (1)
                PROSITE (2) ------------------------------------G_PROTEIN_RECEP_F2_1     --------------------------------------- PROSITE (2)
                 Transcript ---------------------------------------------------------------------------------------------------- Transcript
                 3n7p A  29 EDSIQLGVTRNKImTAQYECYQKImQDPIQQAEGVYCNRTWDGWLCWNDVAAGTESmQLCPDYFQDFDPSEKVTKICDQDGNWFRHPASNRTWTNYTQCN 128
                                    38   |    48    |   58        68        78      | 88        98       108       118       128
                                        42-MSE     53-MSE                          85-MSE                                       

Chain B from PDB  Type:PROTEIN  Length:99
 aligned with CALRL_HUMAN | Q16602 from UniProtKB/Swiss-Prot  Length:461

    Alignment length:99
                                    40        50        60        70        80        90       100       110       120         
          CALRL_HUMAN    31 SIQLGVTRNKIMTAQYECYQKIMQDPIQQAEGVYCNRTWDGWLCWNDVAAGTESMQLCPDYFQDFDPSEKVTKICDQDGNWFRHPASNRTWTNYTQCNV 129
               SCOP domains --------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....hhhhhhhhhhhhhhhhhhhhh........ee..ee....ee..ee..eeeeee............eeeeee........................ Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (1) ----------------G_PROTEIN_RECEP_F2_3  PDB: B:47-129 UniProt: 47-131                                 PROSITE (1)
                PROSITE (2) ----------------------------------G_PROTEIN_RECEP_F2_1     ---------------------------------------- PROSITE (2)
                 Transcript --------------------------------------------------------------------------------------------------- Transcript
                 3n7p B  31 SIQLGVTRNKImTAQYECYQKImQDPIQQAEGVYCNRTWDGWLCWNDVAAGTESmQLCPDYFQDFDPSEKVTKICDQDGNWFRHPASNRTWTNYTQCNV 129
                                    40 |      50  |     60        70        80    |   90       100       110       120         
                                      42-MSE     53-MSE                          85-MSE                                        

Chain C from PDB  Type:PROTEIN  Length:68
 aligned with CALRL_HUMAN | Q16602 from UniProtKB/Swiss-Prot  Length:461

    Alignment length:90
                                    44        54        64        74        84        94       104       114       124
          CALRL_HUMAN    35 GVTRNKIMTAQYECYQKIMQDPIQQAEGVYCNRTWDGWLCWNDVAAGTESMQLCPDYFQDFDPSEKVTKICDQDGNWFRHPASNRTWTNY 124
               SCOP domains ------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ..hhhhhhhhhhhhhhhhhh...--------..........-----...ee......---------.ee..................... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------ SAPs(SNPs)
                PROSITE (1) ------------G_PROTEIN_RECEP_F2_3  PDB: C:47-124 UniProt: 47-131                            PROSITE (1)
                PROSITE (2) ------------------------------G_PROTEIN_RECEP_F2_1     ----------------------------------- PROSITE (2)
                 Transcript ------------------------------------------------------------------------------------------ Transcript
                 3n7p C  35 GVTRNKImTAQYECYQKImQDPI--------NRTWDGWLCW-----GTESmQLCPDY---------VTKICDQDGNWFRHPASNRTWTNY 124
                                   |44        54  |      - |      74|     | 84|     |  -      |104       114       124
                                  42-MSE     53-MSE       66       75    81   |    91       101                       
                                                                             85-MSE                                   

Chain D from PDB  Type:PROTEIN  Length:90
 aligned with RAMP1_HUMAN | O60894 from UniProtKB/Swiss-Prot  Length:148

    Alignment length:90
                                    36        46        56        66        76        86        96       106       116
          RAMP1_HUMAN    27 CQEANYGALLRELCLTQFQVDMEAVGETLWCDWGRTIRSYRELADCTWHMAEKLGCFWPNAEVDRFFLAVHGRYFRSCPISGRAVRDPPG 116
               SCOP domains ------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhh............... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------ Transcript
                 3n7p D  27 CQEANYGALLRELCLTQFQVDMEAVGETLWCDWGRTIRSYRELADCTWHMAEKLGCFWPNAEVDRFFLAVHGRYFRSCPISGRAVRDPPG 116
                                    36        46        56        66        76        86        96       106       116

Chain E from PDB  Type:PROTEIN  Length:79
 aligned with RAMP1_HUMAN | O60894 from UniProtKB/Swiss-Prot  Length:148

    Alignment length:79
                                    36        46        56        66        76        86        96         
          RAMP1_HUMAN    27 CQEANYGALLRELCLTQFQVDMEAVGETLWCDWGRTIRSYRELADCTWHMAEKLGCFWPNAEVDRFFLAVHGRYFRSCP 105
               SCOP domains ------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....hhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhh.... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------- Transcript
                 3n7p E  27 CQEANYGALLRELCLTQFQVDMEAVGETLWCDWGRTIRSYRELADCTWHMAEKLGCFWPNAEVDRFFLAVHGRYFRSCP 105
                                    36        46        56        66        76        86        96         

Chain F from PDB  Type:PROTEIN  Length:79
 aligned with RAMP1_HUMAN | O60894 from UniProtKB/Swiss-Prot  Length:148

    Alignment length:79
                                    36        46        56        66        76        86        96         
          RAMP1_HUMAN    27 CQEANYGALLRELCLTQFQVDMEAVGETLWCDWGRTIRSYRELADCTWHMAEKLGCFWPNAEVDRFFLAVHGRYFRSCP 105
               SCOP domains ------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhh.... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------- Transcript
                 3n7p F  27 CQEANYGALLRELCLTQFQVDMEAVGETLWCDWGRTIRSYRELADCTWHMAEKLGCFWPNAEVDRFFLAVHGRYFRSCP 105
                                    36        46        56        66        76        86        96         

Chain J from PDB  Type:PROTEIN  Length:97
 aligned with CALRL_HUMAN | Q16602 from UniProtKB/Swiss-Prot  Length:461

    Alignment length:97
                                    41        51        61        71        81        91       101       111       121       
          CALRL_HUMAN    32 IQLGVTRNKIMTAQYECYQKIMQDPIQQAEGVYCNRTWDGWLCWNDVAAGTESMQLCPDYFQDFDPSEKVTKICDQDGNWFRHPASNRTWTNYTQCN 128
               SCOP domains ------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------- CATH domains
           Pfam domains (1) ------------------------------HRM-3n7pJ01 J:62-128                                                Pfam domains (1)
           Pfam domains (2) ------------------------------HRM-3n7pJ02 J:62-128                                                Pfam domains (2)
           Pfam domains (3) ------------------------------HRM-3n7pJ03 J:62-128                                                Pfam domains (3)
           Pfam domains (4) ------------------------------HRM-3n7pJ04 J:62-128                                                Pfam domains (4)
         Sec.struct. author .hhhhhhhhhhhhhhhhhhhhhhh........ee..ee....ee..ee..eeeeee............eeeeee..................hhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (1) ---------------G_PROTEIN_RECEP_F2_3  PDB: J:47-128 UniProt: 47-131                                PROSITE (1)
                PROSITE (2) ---------------------------------G_PROTEIN_RECEP_F2_1     --------------------------------------- PROSITE (2)
                 Transcript ------------------------------------------------------------------------------------------------- Transcript
                 3n7p J  32 IQLGVTRNKImTAQYECYQKImQDPIQQAEGVYCNRTWDGWLCWNDVAAGTESmQLCPDYFQDFDPSEKVTKICDQDGNWFRHPASNRTWTNYTQCN 128
                                    41|       51 |      61        71        81   |    91       101       111       121       
                                     42-MSE     53-MSE                          85-MSE                                       

Chain R from PDB  Type:PROTEIN  Length:91
 aligned with RAMP1_HUMAN | O60894 from UniProtKB/Swiss-Prot  Length:148

    Alignment length:91
                                    36        46        56        66        76        86        96       106       116 
          RAMP1_HUMAN    27 CQEANYGALLRELCLTQFQVDMEAVGETLWCDWGRTIRSYRELADCTWHMAEKLGCFWPNAEVDRFFLAVHGRYFRSCPISGRAVRDPPGS 117
               SCOP domains ------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------- CATH domains
           Pfam domains (1) -------RAMP-3n7pR01 R:34-117                                                                Pfam domains (1)
           Pfam domains (2) -------RAMP-3n7pR02 R:34-117                                                                Pfam domains (2)
           Pfam domains (3) -------RAMP-3n7pR03 R:34-117                                                                Pfam domains (3)
           Pfam domains (4) -------RAMP-3n7pR04 R:34-117                                                                Pfam domains (4)
         Sec.struct. author .hhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhh................ Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------- Transcript
                 3n7p R  27 CQEANYGALLRELCLTQFQVDMEAVGETLWCDWGRTIRSYRELADCTWHMAEKLGCFWPNAEVDRFFLAVHGRYFRSCPISGRAVRDPPGS 117
                                    36        46        56        66        76        86        96       106       116 

   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 3N7P)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 3N7P)

(-) Pfam Domains  (2, 8)

Asymmetric Unit
(-)
Family: HRM (9)
1aHRM-3n7pJ01J:62-128
1bHRM-3n7pJ02J:62-128
1cHRM-3n7pJ03J:62-128
1dHRM-3n7pJ04J:62-128
(-)
Family: RAMP (5)
2aRAMP-3n7pR01R:34-117
2bRAMP-3n7pR02R:34-117
2cRAMP-3n7pR03R:34-117
2dRAMP-3n7pR04R:34-117

(-) Gene Ontology  (44, 57)

Asymmetric Unit(hide GO term definitions)
Chain A,B,C,J   (CALRL_HUMAN | Q16602)
molecular function
    GO:0004930    G-protein coupled receptor activity    Combining with an extracellular signal and transmitting the signal across the membrane by activating an associated G-protein; promotes the exchange of GDP for GTP on the alpha subunit of a heterotrimeric G-protein complex.
    GO:0001605    adrenomedullin receptor activity    Combining with adrenomedullin to initiate a change in cell activity.
    GO:0001635    calcitonin gene-related peptide receptor activity    Combining with a calcitonin gene-related polypeptide (CGRP) to initiate a change in cell activity.
    GO:0004948    calcitonin receptor activity    Combining with calcitonin and transmitting the signal across the membrane by activating an associated G-protein; promotes the exchange of GDP for GTP on the alpha subunit of a heterotrimeric G-protein complex.
    GO:0005515    protein binding    Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
    GO:0008565    protein transporter activity    Enables the directed movement of proteins into, out of or within a cell, or between cells.
    GO:0004871    signal transducer activity    Conveys a signal across a cell to trigger a change in cell function or state. A signal is a physical entity or change in state that is used to transfer information in order to trigger a response.
    GO:0004888    transmembrane signaling receptor activity    Combining with an extracellular or intracellular signal and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity or state as part of signal transduction.
biological process
    GO:0007186    G-protein coupled receptor signaling pathway    A series of molecular signals that proceeds with an activated receptor promoting the exchange of GDP for GTP on the alpha-subunit of an associated heterotrimeric G-protein complex. The GTP-bound activated alpha-G-protein then dissociates from the beta- and gamma-subunits to further transmit the signal within the cell. The pathway begins with receptor-ligand interaction, or for basal GPCR signaling the pathway begins with the receptor activating its G protein in the absence of an agonist, and ends with regulation of a downstream cellular process, e.g. transcription. The pathway can start from the plasma membrane, Golgi or nuclear membrane (PMID:24568158 and PMID:16902576).
    GO:0007187    G-protein coupled receptor signaling pathway, coupled to cyclic nucleotide second messenger    The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand, where the pathway proceeds with activation or inhibition of a nucleotide cyclase activity and a subsequent change in the concentration of a cyclic nucleotide.
    GO:0007189    adenylate cyclase-activating G-protein coupled receptor signaling pathway    The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand, where the pathway proceeds through activation of adenylyl cyclase activity and a subsequent increase in the concentration of cyclic AMP (cAMP).
    GO:0001525    angiogenesis    Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels.
    GO:0006171    cAMP biosynthetic process    The chemical reactions and pathways resulting in the formation of the nucleotide cAMP (cyclic AMP, adenosine 3',5'-cyclophosphate).
    GO:0006816    calcium ion transport    The directed movement of calcium (Ca) ions into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
    GO:0007166    cell surface receptor signaling pathway    A series of molecular signals initiated by activation of a receptor on the surface of a cell. The pathway begins with binding of an extracellular ligand to a cell surface receptor, or for receptors that signal in the absence of a ligand, by ligand-withdrawal or the activity of a constitutively active receptor. The pathway ends with regulation of a downstream cellular process, e.g. transcription.
    GO:0071329    cellular response to sucrose stimulus    Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a sucrose stimulus.
    GO:0007507    heart development    The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood.
    GO:0050728    negative regulation of inflammatory response    Any process that stops, prevents, or reduces the frequency, rate or extent of the inflammatory response.
    GO:0045986    negative regulation of smooth muscle contraction    Any process that stops, prevents, or reduces the frequency, rate or extent of smooth muscle contraction.
    GO:0030819    positive regulation of cAMP biosynthetic process    Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of the nucleotide cAMP (cyclic AMP, adenosine 3',5'-cyclophosphate).
    GO:0008284    positive regulation of cell proliferation    Any process that activates or increases the rate or extent of cell proliferation.
    GO:0048661    positive regulation of smooth muscle cell proliferation    Any process that activates or increases the rate or extent of smooth muscle cell proliferation.
    GO:0015031    protein transport    The directed movement of proteins into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
    GO:0031623    receptor internalization    A receptor-mediated endocytosis process that results in the movement of receptors from the plasma membrane to the inside of the cell. The process begins when cell surface receptors are monoubiquitinated following ligand-induced activation. Receptors are subsequently taken up into endocytic vesicles from where they are either targeted to the lysosome or vacuole for degradation or recycled back to the plasma membrane.
    GO:0007165    signal transduction    The cellular process in which a signal is conveyed to trigger a change in the activity or state of a cell. Signal transduction begins with reception of a signal (e.g. a ligand binding to a receptor or receptor activation by a stimulus such as light), or for signal transduction in the absence of ligand, signal-withdrawal or the activity of a constitutively active receptor. Signal transduction ends with regulation of a downstream cellular process, e.g. regulation of transcription or regulation of a metabolic process. Signal transduction covers signaling from receptors located on the surface of the cell and signaling via molecules located within the cell. For signaling between cells, signal transduction is restricted to events at and within the receiving cell.
cellular component
    GO:0005783    endoplasmic reticulum    The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached).
    GO:0005768    endosome    A vacuole to which materials ingested by endocytosis are delivered.
    GO:0016021    integral component of membrane    The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.
    GO:0005887    integral component of plasma membrane    The component of the plasma membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.
    GO:0005764    lysosome    A small lytic vacuole that has cell cycle-independent morphology and is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions.
    GO:0016020    membrane    A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
    GO:0005886    plasma membrane    The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins.

Chain D,E,F,R   (RAMP1_HUMAN | O60894)
molecular function
    GO:0004948    calcitonin receptor activity    Combining with calcitonin and transmitting the signal across the membrane by activating an associated G-protein; promotes the exchange of GDP for GTP on the alpha subunit of a heterotrimeric G-protein complex.
    GO:0031716    calcitonin receptor binding    Interacting selectively and non-covalently with a calcitonin receptor.
    GO:0015026    coreceptor activity    Combining with an extracellular or intracellular messenger, and in cooperation with a nearby primary receptor, initiating a change in cell activity.
    GO:0005515    protein binding    Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
    GO:0008565    protein transporter activity    Enables the directed movement of proteins into, out of or within a cell, or between cells.
    GO:0004872    receptor activity    Combining with an extracellular or intracellular messenger to initiate a change in cell activity.
biological process
    GO:0007186    G-protein coupled receptor signaling pathway    A series of molecular signals that proceeds with an activated receptor promoting the exchange of GDP for GTP on the alpha-subunit of an associated heterotrimeric G-protein complex. The GTP-bound activated alpha-G-protein then dissociates from the beta- and gamma-subunits to further transmit the signal within the cell. The pathway begins with receptor-ligand interaction, or for basal GPCR signaling the pathway begins with the receptor activating its G protein in the absence of an agonist, and ends with regulation of a downstream cellular process, e.g. transcription. The pathway can start from the plasma membrane, Golgi or nuclear membrane (PMID:24568158 and PMID:16902576).
    GO:0001525    angiogenesis    Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels.
    GO:0006816    calcium ion transport    The directed movement of calcium (Ca) ions into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
    GO:0006886    intracellular protein transport    The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell.
    GO:0030819    positive regulation of cAMP biosynthetic process    Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of the nucleotide cAMP (cyclic AMP, adenosine 3',5'-cyclophosphate).
    GO:0060050    positive regulation of protein glycosylation    Any process that activates or increases the frequency, rate or extent of the glycosylation of one or more amino acid residues within a protein. Protein glycosylation is the addition of a carbohydrate or carbohydrate derivative unit to a protein amino acid, e.g. the addition of glycan chains to proteins.
    GO:0072659    protein localization to plasma membrane    A process in which a protein is transported to, or maintained in, a specific location in the plasma membrane.
    GO:0015031    protein transport    The directed movement of proteins into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
    GO:0031623    receptor internalization    A receptor-mediated endocytosis process that results in the movement of receptors from the plasma membrane to the inside of the cell. The process begins when cell surface receptors are monoubiquitinated following ligand-induced activation. Receptors are subsequently taken up into endocytic vesicles from where they are either targeted to the lysosome or vacuole for degradation or recycled back to the plasma membrane.
    GO:0008277    regulation of G-protein coupled receptor protein signaling pathway    Any process that modulates the frequency, rate or extent of G-protein coupled receptor protein signaling pathway activity.
    GO:0006810    transport    The directed movement of substances (such as macromolecules, small molecules, ions) or cellular components (such as complexes and organelles) into, out of or within a cell, or between cells, or within a multicellular organism by means of some agent such as a transporter, pore or motor protein.
cellular component
    GO:0009986    cell surface    The external part of the cell wall and/or plasma membrane.
    GO:0005615    extracellular space    That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid.
    GO:0016021    integral component of membrane    The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.
    GO:0005887    integral component of plasma membrane    The component of the plasma membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.
    GO:0005622    intracellular    The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
    GO:0016020    membrane    A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
    GO:0005886    plasma membrane    The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins.
    GO:0043235    receptor complex    Any protein complex that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function.

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        CALRL_HUMAN | Q166023aqf 3n7r 3n7s 4rwf 4rwg
        RAMP1_HUMAN | O608942yx8 3n7r 3n7s 4rwg

(-) Related Entries Specified in the PDB File

3n7r 3n7s