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(-) Description

Title :  CRYSTAL STRUCTURE OF NATIVE CG10062
 
Authors :  Y. Guo, B. A. Robertson, M. L. Hackert, C. P. Whitman
Date :  21 May 10  (Deposition) - 01 Jun 11  (Release) - 01 Jun 11  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.44
Chains :  Asym./Biol. Unit :  A,B,C
Keywords :  Cg10062, Cis-3-Chloroacrylic Acid Dehalogenase, Tautomerase Superfamily, Beta-Alpha-Beta Motif, Hydrolase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  Y. Guo, B. A. Robertson, G. J Poelarends, A-M. W. H. Thunnissen, C. P. Whitman, M. L. Hackert, B. W. Dijkstra
Crystal Structures Of The Native And Inactivated Cg10062, A Cis-3-Chloroacrylic Acid Dehalogenase From Corynebacterium Glutamicum: Implications For The Evolution Of Cis-3-Chloroacrylic Acid Dehalogenase Activity In The Tautomerase Superfamily
To Be Published
PubMed: search

(-) Compounds

Molecule 1 - PUTATIVE TAUTOMERASE
    Chains: A, B, C
    EC Number: 3.8.1.-
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PET3B
    Expression System Strain: BL21-GOLD(DE3)
    Expression System Taxid: 469008
    Expression System Vector Type: PLASMID
    Gene: CG0081, CG10062, CGL0062
    Organism Common: BREVIBACTERIUM FLAVUM
    Organism Scientific: CORYNEBACTERIUM GLUTAMICUM
    Organism Taxid: 1718
    Synonym: PUTATIVE UNCHARACTERIZED PROTEIN CGL0062

 Structural Features

(-) Chains, Units

  123
Asymmetric/Biological Unit : ABC

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 3N4G)

(-) Sites  (0, 0)

(no "Site" information available for 3N4G)

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 3N4G)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 3N4G)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 3N4G)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 3N4G)

(-) Exons   (0, 0)

(no "Exon" information available for 3N4G)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:146
 aligned with Q8NU77_CORGL | Q8NU77 from UniProtKB/TrEMBL  Length:149

    Alignment length:146
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141      
         Q8NU77_CORGL     2 PTYTCWSQRIRISREAKQRIAEAITDAHHELAHAPKYLVQVIFNEVEPDSYFIAAQSASENHIWVQATIRSGRTEKQKEELLLRLTQEIALILGIPNEEVWVYITEIPGSNMTEYGRLLMEPGEEEKWFNSLPEGLRERLTELEGS 147
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeeee....hhhhhhhhhhhhhhhhhhhh..hhhh.eeeeeee....eee..ee.....eeeeeeee...hhhhhhhhhhhhhhhhhhhhh.hhh.eeeeeeeehhh.ee..........hhhhhhhh.hhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3n4g A   1 PTYTCWSQRIRISREAKQRIAEAITDAHHELAHAPKYLVQVIFNEVEPDSYFIAAQSASENHIWVQATIRSGRTEKQKEELLLRLTQEIALILGIPNEEVWVYITEIPGSNMTEYGRLLMEPGEEEKWFNSLPEGLRERLTELEGS 146
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140      


Chain B from PDB  Type:PROTEIN  Length:143
 aligned with Q8NU77_CORGL | Q8NU77 from UniProtKB/TrEMBL  Length:149

    Alignment length:143
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141   
         Q8NU77_CORGL     2 PTYTCWSQRIRISREAKQRIAEAITDAHHELAHAPKYLVQVIFNEVEPDSYFIAAQSASENHIWVQATIRSGRTEKQKEELLLRLTQEIALILGIPNEEVWVYITEIPGSNMTEYGRLLMEPGEEEKWFNSLPEGLRERLTEL 144
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeeee....hhhhhhhhhhhhhhhhhhhhh.hhhh.eeeeeee....ee..........eeeeeeee...hhhhhhhhhhhhhhhhhhhhh.hhh.eeeeeeeehhh.eee..ee.....hhhhhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3n4g B   1 PTYTCWSQRIRISREAKQRIAEAITDAHHELAHAPKYLVQVIFNEVEPDSYFIAAQSASENHIWVQATIRSGRTEKQKEELLLRLTQEIALILGIPNEEVWVYITEIPGSNMTEYGRLLMEPGEEEKWFNSLPEGLRERLTEL 143
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140   


Chain C from PDB  Type:PROTEIN  Length:143
 aligned with Q8NU77_CORGL | Q8NU77 from UniProtKB/TrEMBL  Length:149

    Alignment length:143
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141   
         Q8NU77_CORGL     2 PTYTCWSQRIRISREAKQRIAEAITDAHHELAHAPKYLVQVIFNEVEPDSYFIAAQSASENHIWVQATIRSGRTEKQKEELLLRLTQEIALILGIPNEEVWVYITEIPGSNMTEYGRLLMEPGEEEKWFNSLPEGLRERLTEL 144
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
           Pfam domains (1) ---------------------------------------------------------------Tautomerase-3n4gC01 C:64-121                              ---------------------- Pfam domains (1)
           Pfam domains (2) ---------------------------------------------------------------Tautomerase-3n4gC02 C:64-121                              ---------------------- Pfam domains (2)
           Pfam domains (3) ---------------------------------------------------------------Tautomerase-3n4gC03 C:64-121                              ---------------------- Pfam domains (3)
           Pfam domains (4) ---------------------------------------------------------------Tautomerase-3n4gC04 C:64-121                              ---------------------- Pfam domains (4)
           Pfam domains (5) ---------------------------------------------------------------Tautomerase-3n4gC05 C:64-121                              ---------------------- Pfam domains (5)
           Pfam domains (6) ---------------------------------------------------------------Tautomerase-3n4gC06 C:64-121                              ---------------------- Pfam domains (6)
         Sec.struct. author .eeeeeee....hhhhhhhhhhhhhhhhhhhhh.hhhhheeeeeee....eee..ee.....eeeeeeee...hhhhhhhhhhhhhhhhhhhhh.hhh.eeeeeeeehhh.eee..ee.....hhhhhhhh.hhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3n4g C   1 PTYTCWSQRIRISREAKQRIAEAITDAHHELAHAPKYLVQVIFNEVEPDSYFIAAQSASENHIWVQATIRSGRTEKQKEELLLRLTQEIALILGIPNEEVWVYITEIPGSNMTEYGRLLMEPGEEEKWFNSLPEGLRERLTEL 143
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140
   Legend:   → Mismatch (orange background)
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  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 3N4G)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 3N4G)

(-) Pfam Domains  (1, 6)

Asymmetric/Biological Unit
(-)
Clan: MIF (36)

(-) Gene Ontology  (0, 0)

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/TrEMBL
        Q8NU77_CORGL | Q8NU77: 3n4d 3n4h

(-) Related Entries Specified in the PDB File

3n4d CG10062 INACTIVATED BY (R)-OXIRANE-2-CARBOXYLATE
3n4h CG10062 INACTIVATED BY (S)-OXIRANE-2-CARBOXYLATE