Chain A from PDB Type:PROTEIN Length:109
aligned with Q9HT87_PSEAE | Q9HT87 from UniProtKB/TrEMBL Length:595
Alignment length:116
52 62 72 82 92 102 112 122 132 142 152
Q9HT87_PSEAE 43 EQRMSHHYATIEVSQQLRQLLGDQLVILLRETPDGQALERSQNDFRRVLEQGRANTVDSAEQAALDGVRDAYLQLQAHTPALLEAPMADNDGFSEAFNGLRLRLQDLQQLALAGIS 158
SCOP domains -------------------------------------------------------------------------------------------------------------------- SCOP domains
CATH domains -------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains -------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author hhhhhhhhhhhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhh....-------.hhhhhhhhhhhhhhhhhhhhhhhhhh Sec.struct. author
SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE -------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript -------------------------------------------------------------------------------------------------------------------- Transcript
3n24 A 43 EQRmSHHYATIEVSQQLRQLLGDQLVILLRETPDGQALERSQNDFRRVLEQGRANTVDSAEQAALDGVRDAYLQLQAHTPAL-------NDGFSEAFNGLRLRLQDLQQLALAGIS 158
| 52 62 72 82 92 102 112 122 | 132 142 152
| 124 132
46-MSE
Chain B from PDB Type:PROTEIN Length:102
aligned with Q9HT87_PSEAE | Q9HT87 from UniProtKB/TrEMBL Length:595
Alignment length:116
58 68 78 88 98 108 118 128 138 148 158
Q9HT87_PSEAE 49 HYATIEVSQQLRQLLGDQLVILLRETPDGQALERSQNDFRRVLEQGRANTVDSAEQAALDGVRDAYLQLQAHTPALLEAPMADNDGFSEAFNGLRLRLQDLQQLALAGISEAETSA 164
SCOP domains -------------------------------------------------------------------------------------------------------------------- SCOP domains
CATH domains -------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains -------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author hhhhhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhh.------hhhhhhhhhhhhhhhhhhh.--------hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh Sec.struct. author
SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE -------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript -------------------------------------------------------------------------------------------------------------------- Transcript
3n24 B 49 HYATIEVSQQLRQLLGDQLVILLRETPDGQALERSQNDFRRVLEQGRA------EQAALDGVRDAYLQLQAHTP--------DNDGFSEAFNGLRLRLQDLQQLALAGISEAETSA 164
58 68 78 88 | - | 108 118 | - | 138 148 158
96 103 122 131
Chain C from PDB Type:PROTEIN Length:123
aligned with Q9HT87_PSEAE | Q9HT87 from UniProtKB/TrEMBL Length:595
Alignment length:123
50 60 70 80 90 100 110 120 130 140 150 160
Q9HT87_PSEAE 41 AQEQRMSHHYATIEVSQQLRQLLGDQLVILLRETPDGQALERSQNDFRRVLEQGRANTVDSAEQAALDGVRDAYLQLQAHTPALLEAPMADNDGFSEAFNGLRLRLQDLQQLALAGISEAETS 163
SCOP domains --------------------------------------------------------------------------------------------------------------------------- SCOP domains
CATH domains --------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains --------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh Sec.struct. author
SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE --------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript --------------------------------------------------------------------------------------------------------------------------- Transcript
3n24 C 41 AQEQRmSHHYATIEVSQQLRQLLGDQLVILLRETPDGQALERSQNDFRRVLEQGRANTVDSAEQAALDGVRDAYLQLQAHTPALLEAPmADNDGFSEAFNGLRLRLQDLQQLALAGISEAETS 163
| 50 60 70 80 90 100 110 120 130 140 150 160
46-MSE 129-MSE
Chain D from PDB Type:PROTEIN Length:105
aligned with Q9HT87_PSEAE | Q9HT87 from UniProtKB/TrEMBL Length:595
Alignment length:116
56 66 76 86 96 106 116 126 136 146 156
Q9HT87_PSEAE 47 SHHYATIEVSQQLRQLLGDQLVILLRETPDGQALERSQNDFRRVLEQGRANTVDSAEQAALDGVRDAYLQLQAHTPALLEAPMADNDGFSEAFNGLRLRLQDLQQLALAGISEAET 162
SCOP domains -------------------------------------------------------------------------------------------------------------------- SCOP domains
CATH domains -------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains -------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author hhhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhh.---hhhhhhhhhhhhhhhhhhh..--------hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh Sec.struct. author
SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE -------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript -------------------------------------------------------------------------------------------------------------------- Transcript
3n24 D 47 SHHYATIEVSQQLRQLLGDQLVILLRETPDGQALERSQNDFRRVLEQGRANT---AEQAALDGVRDAYLQLQAHTP--------DNDGFSEAFNGLRLRLQDLQQLALAGISEAET 162
56 66 76 86 96 | | 106 116 | - | 136 146 156
98 102 122 131
Chain E from PDB Type:PROTEIN Length:102
aligned with Q9HT87_PSEAE | Q9HT87 from UniProtKB/TrEMBL Length:595
Alignment length:117
51 61 71 81 91 101 111 121 131 141 151
Q9HT87_PSEAE 42 QEQRMSHHYATIEVSQQLRQLLGDQLVILLRETPDGQALERSQNDFRRVLEQGRANTVDSAEQAALDGVRDAYLQLQAHTPALLEAPMADNDGFSEAFNGLRLRLQDLQQLALAGIS 158
SCOP domains --------------------------------------------------------------------------------------------------------------------- SCOP domains
CATH domains --------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains --------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh----hhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhh.-----------hhhhhhhhhhhhhhhhhhhhhhhhhhh Sec.struct. author
SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE --------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript --------------------------------------------------------------------------------------------------------------------- Transcript
3n24 E 42 QEQRmSHHYATIEVSQQLRQLLGDQLVILLR----GQALERSQNDFRRVLEQGRANTVDSAEQAALDGVRDAYLQLQAH-----------NDGFSEAFNGLRLRLQDLQQLALAGIS 158
| 51 61 71| | 81 91 101 111 |- -| 141 151
46-MSE 72 77 120 132
Chain F from PDB Type:PROTEIN Length:114
aligned with Q9HT87_PSEAE | Q9HT87 from UniProtKB/TrEMBL Length:595
Alignment length:121
51 61 71 81 91 101 111 121 131 141 151 161
Q9HT87_PSEAE 42 QEQRMSHHYATIEVSQQLRQLLGDQLVILLRETPDGQALERSQNDFRRVLEQGRANTVDSAEQAALDGVRDAYLQLQAHTPALLEAPMADNDGFSEAFNGLRLRLQDLQQLALAGISEAET 162
SCOP domains ------------------------------------------------------------------------------------------------------------------------- SCOP domains
CATH domains ------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhh....-------hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ------------------------------------------------------------------------------------------------------------------------- Transcript
3n24 F 42 QEQRmSHHYATIEVSQQLRQLLGDQLVILLRETPDGQALERSQNDFRRVLEQGRANTVDSAEQAALDGVRDAYLQLQAHTPAL-------NDGFSEAFNGLRLRLQDLQQLALAGISEAET 162
| 51 61 71 81 91 101 111 121 | -| 141 151 161
46-MSE 124 132
Chain G from PDB Type:PROTEIN Length:110
aligned with Q9HT87_PSEAE | Q9HT87 from UniProtKB/TrEMBL Length:595
Alignment length:117
50 60 70 80 90 100 110 120 130 140 150
Q9HT87_PSEAE 41 AQEQRMSHHYATIEVSQQLRQLLGDQLVILLRETPDGQALERSQNDFRRVLEQGRANTVDSAEQAALDGVRDAYLQLQAHTPALLEAPMADNDGFSEAFNGLRLRLQDLQQLALAGI 157
SCOP domains --------------------------------------------------------------------------------------------------------------------- SCOP domains
CATH domains --------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains --------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhh...-------hhhhhhhhhhhhhhhhhhhhhhhhh. Sec.struct. author
SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE --------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript --------------------------------------------------------------------------------------------------------------------- Transcript
3n24 G 41 AQEQRmSHHYATIEVSQQLRQLLGDQLVILLRETPDGQALERSQNDFRRVLEQGRANTVDSAEQAALDGVRDAYLQLQAHTPAL-------NDGFSEAFNGLRLRLQDLQQLALAGI 157
| 50 60 70 80 90 100 110 120 | - | 140 150
46-MSE 124 132
Chain H from PDB Type:PROTEIN Length:111
aligned with Q9HT87_PSEAE | Q9HT87 from UniProtKB/TrEMBL Length:595
Alignment length:120
51 61 71 81 91 101 111 121 131 141 151 161
Q9HT87_PSEAE 42 QEQRMSHHYATIEVSQQLRQLLGDQLVILLRETPDGQALERSQNDFRRVLEQGRANTVDSAEQAALDGVRDAYLQLQAHTPALLEAPMADNDGFSEAFNGLRLRLQDLQQLALAGISEAE 161
SCOP domains ------------------------------------------------------------------------------------------------------------------------ SCOP domains
CATH domains ------------------------------------------------------------------------------------------------------------------------ CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------ Pfam domains
Sec.struct. author hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhh...---------hhhhhhhhhhhhhhhhhhhhhhhhhhhhh Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
PROSITE ------------------------------------------------------------------------------------------------------------------------ PROSITE
Transcript ------------------------------------------------------------------------------------------------------------------------ Transcript
3n24 H 42 QEQRmSHHYATIEVSQQLRQLLGDQLVILLRETPDGQALERSQNDFRRVLEQGRANTVDSAEQAALDGVRDAYLQLQAHTPA---------DGFSEAFNGLRLRLQDLQQLALAGISEAE 161
| 51 61 71 81 91 101 111 121 | - | 141 151 161
46-MSE 123 133
Legend: |
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→ Mismatch |
(orange background) |
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- |
→ Gap |
(green background, '-', border residues have a numbering label) |
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→ Modified Residue |
(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name) |
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x |
→ Chemical Group |
(purple background, 'x', labelled with number + name, e.g. ACE or NH2) |
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extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|' |