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(-) Description

Title :  CRYSTAL STRUCTURE OF ENDOGLUCANASE CEL5A FROM THE HYPERTHERMOPHILIC THERMOTOGA MARITIMA
 
Authors :  J. H. Pereira, Z. Chen, R. P. Mcandrew, R. Sapra, S. R. Chhabra, K. L. Sale B. A. Simmons, P. D. Adams
Date :  20 Apr 10  (Deposition) - 28 Jul 10  (Release) - 19 Jan 11  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.20
Chains :  Asym. Unit :  A,B,C,D,E,F,G,H
Biol. Unit 1:  A  (1x)
Biol. Unit 2:  B  (1x)
Biol. Unit 3:  C  (1x)
Biol. Unit 4:  D  (1x)
Biol. Unit 5:  E  (1x)
Biol. Unit 6:  F  (1x)
Biol. Unit 7:  G  (1x)
Biol. Unit 8:  H  (1x)
Biol. Unit 9:  A,B  (1x)
Biol. Unit 10:  C,D  (1x)
Biol. Unit 11:  E,F  (1x)
Biol. Unit 12:  G,H  (1x)
Keywords :  Tim-Barrel Fold, Hydrolase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  J. H. Pereira, Z. Chen, R. P. Mcandrew, R. Sapra, S. R. Chhabra, K. L. Sale, B. A. Simmons, P. D. Adams
Biochemical Characterization And Crystal Structure Of Endoglucanase Cel5A From The Hyperthermophilic Thermotoga Maritima.
J. Struct. Biol. V. 172 372 2010
PubMed-ID: 20599513  |  Reference-DOI: 10.1016/J.JSB.2010.06.018

(-) Compounds

Molecule 1 - ENDOGLUCANASE
    Chains: A, B, C, D, E, F, G, H
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Strain: BL21(DE3)
    Expression System Taxid: 562
    Expression System Vector Type: PCDF2 EK/LIC
    Gene: TM_1751
    Organism Scientific: THERMOTOGA MARITIMA
    Organism Taxid: 2336
    Synonym: ENDOGLUCANASE CEL5A

 Structural Features

(-) Chains, Units

  12345678
Asymmetric Unit : ABCDEFGH
Biological Unit 1 (1x): A       
Biological Unit 2 (1x):  B      
Biological Unit 3 (1x):   C     
Biological Unit 4 (1x):    D    
Biological Unit 5 (1x):     E   
Biological Unit 6 (1x):      F  
Biological Unit 7 (1x):       G 
Biological Unit 8 (1x):        H
Biological Unit 9 (1x): AB      
Biological Unit 10 (1x):   CD    
Biological Unit 11 (1x):     EF  
Biological Unit 12 (1x):       GH

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (2, 56)

Asymmetric Unit (2, 56)
No.NameCountTypeFull Name
1CD20Ligand/IonCADMIUM ION
2NI36Ligand/IonNICKEL (II) ION
Biological Unit 1 (0, 0)
No.NameCountTypeFull Name
1CD-1Ligand/IonCADMIUM ION
2NI-1Ligand/IonNICKEL (II) ION
Biological Unit 2 (0, 0)
No.NameCountTypeFull Name
1CD-1Ligand/IonCADMIUM ION
2NI-1Ligand/IonNICKEL (II) ION
Biological Unit 3 (0, 0)
No.NameCountTypeFull Name
1CD-1Ligand/IonCADMIUM ION
2NI-1Ligand/IonNICKEL (II) ION
Biological Unit 4 (0, 0)
No.NameCountTypeFull Name
1CD-1Ligand/IonCADMIUM ION
2NI-1Ligand/IonNICKEL (II) ION
Biological Unit 5 (0, 0)
No.NameCountTypeFull Name
1CD-1Ligand/IonCADMIUM ION
2NI-1Ligand/IonNICKEL (II) ION
Biological Unit 6 (0, 0)
No.NameCountTypeFull Name
1CD-1Ligand/IonCADMIUM ION
2NI-1Ligand/IonNICKEL (II) ION
Biological Unit 7 (0, 0)
No.NameCountTypeFull Name
1CD-1Ligand/IonCADMIUM ION
2NI-1Ligand/IonNICKEL (II) ION
Biological Unit 8 (0, 0)
No.NameCountTypeFull Name
1CD-1Ligand/IonCADMIUM ION
2NI-1Ligand/IonNICKEL (II) ION
Biological Unit 9 (0, 0)
No.NameCountTypeFull Name
1CD-1Ligand/IonCADMIUM ION
2NI-1Ligand/IonNICKEL (II) ION
Biological Unit 10 (0, 0)
No.NameCountTypeFull Name
1CD-1Ligand/IonCADMIUM ION
2NI-1Ligand/IonNICKEL (II) ION
Biological Unit 11 (0, 0)
No.NameCountTypeFull Name
1CD-1Ligand/IonCADMIUM ION
2NI-1Ligand/IonNICKEL (II) ION
Biological Unit 12 (0, 0)
No.NameCountTypeFull Name
1CD-1Ligand/IonCADMIUM ION
2NI-1Ligand/IonNICKEL (II) ION

(-) Sites  (56, 56)

Asymmetric Unit (56, 56)
No.NameEvidenceResiduesDescription
01AC1SOFTWAREHIS A:96 , GLU A:98 , HOH A:582 , HOH B:769BINDING SITE FOR RESIDUE CD A 318
02AC2SOFTWAREGLU A:99 , HOH A:1368 , GLU B:99 , HOH B:1367 , HOH B:1369BINDING SITE FOR RESIDUE CD A 319
03AC3SOFTWAREGLU A:136 , GLU A:253 , HOH A:596 , HOH A:606 , HOH A:776 , HOH A:1027BINDING SITE FOR RESIDUE CD A 320
04AC4SOFTWAREGLU A:144 , HOH A:672 , GLU H:78 , HOH H:1012BINDING SITE FOR RESIDUE NI A 321
05AC5SOFTWAREASP A:226 , HIS A:230 , HOH A:774 , ASP G:227 , HOH G:668BINDING SITE FOR RESIDUE NI A 322
06AC6SOFTWAREGLU A:202BINDING SITE FOR RESIDUE NI A 323
07AC7SOFTWAREASP A:305BINDING SITE FOR RESIDUE NI A 324
08AC8SOFTWAREHIS A:205BINDING SITE FOR RESIDUE NI A 325
09AC9SOFTWAREHOH B:1237BINDING SITE FOR RESIDUE NI A 326
10BC1SOFTWAREHOH A:601 , HIS B:96 , GLU B:98 , HOH B:584BINDING SITE FOR RESIDUE CD B 318
11BC2SOFTWAREGLU B:136 , GLU B:253 , HOH B:611 , HOH B:775 , HOH B:1249 , HOH B:1250BINDING SITE FOR RESIDUE CD B 319
12BC3SOFTWAREGLU B:78 , HOH B:638 , GLU G:144 , HOH G:631BINDING SITE FOR RESIDUE NI B 320
13BC4SOFTWAREGLU B:180 , HOH B:1263 , GLU H:180 , LYS H:244 , HOH H:378BINDING SITE FOR RESIDUE NI B 321
14BC5SOFTWAREGLU B:202 , ARG B:220 , HOH B:595 , HOH B:1288 , ASP H:226BINDING SITE FOR RESIDUE NI B 322
15BC6SOFTWAREHIS B:205 , HOH B:1249BINDING SITE FOR RESIDUE NI B 323
16BC7SOFTWAREGLU B:127BINDING SITE FOR RESIDUE NI B 324
17BC8SOFTWAREHIS C:96 , GLU C:98 , HOH C:578 , HOH C:586BINDING SITE FOR RESIDUE CD C 318
18BC9SOFTWAREGLU C:99 , HOH C:1370 , HOH C:1371 , GLU D:99 , HOH D:1372BINDING SITE FOR RESIDUE CD C 319
19CC1SOFTWAREGLU C:136 , GLU C:253 , HOH C:501 , HOH C:598 , HOH C:623BINDING SITE FOR RESIDUE CD C 320
20CC2SOFTWAREGLU C:144 , HOH C:962 , GLU F:78BINDING SITE FOR RESIDUE NI C 321
21CC3SOFTWAREASP C:226 , HIS C:230 , ASP E:227BINDING SITE FOR RESIDUE NI C 322
22CC4SOFTWAREHIS C:205BINDING SITE FOR RESIDUE NI C 323
23CC5SOFTWAREMET C:69BINDING SITE FOR RESIDUE NI C 324
24CC6SOFTWAREASN C:140 , HOH D:1294BINDING SITE FOR RESIDUE NI C 325
25CC7SOFTWAREGLU C:127BINDING SITE FOR RESIDUE NI C 326
26CC8SOFTWAREHIS D:96 , GLU D:98 , HOH D:592 , HOH D:1241BINDING SITE FOR RESIDUE CD D 318
27CC9SOFTWAREGLU D:136 , GLU D:253 , HOH D:814 , HOH D:1011 , HOH D:1252 , HOH D:1319BINDING SITE FOR RESIDUE CD D 319
28DC1SOFTWAREGLU D:78 , HOH D:436 , HOH D:659 , GLU E:144BINDING SITE FOR RESIDUE NI D 320
29DC2SOFTWAREGLU D:127 , HOH D:1266 , HOH D:1267BINDING SITE FOR RESIDUE NI D 321
30DC3SOFTWAREHIS D:205BINDING SITE FOR RESIDUE NI D 322
31DC4SOFTWAREHIS E:96 , GLU E:98 , HOH E:499 , HOH E:621 , HOH E:771BINDING SITE FOR RESIDUE CD E 318
32DC5SOFTWAREGLU E:99 , HOH E:1374 , GLU F:99 , HOH F:585BINDING SITE FOR RESIDUE CD E 319
33DC6SOFTWAREGLU E:136 , GLU E:253 , HOH E:616 , HOH E:666 , HOH E:788BINDING SITE FOR RESIDUE CD E 320
34DC7SOFTWAREHOH C:1330 , GLU E:78 , HOH E:1331BINDING SITE FOR RESIDUE NI E 321
35DC8SOFTWAREHIS E:205 , HOH E:788BINDING SITE FOR RESIDUE NI E 322
36DC9SOFTWAREMET E:69BINDING SITE FOR RESIDUE NI E 323
37EC1SOFTWAREGLU E:127 , HOH E:662BINDING SITE FOR RESIDUE NI E 324
38EC2SOFTWAREHOH E:614 , HIS F:96 , GLU F:98 , HOH F:579BINDING SITE FOR RESIDUE CD F 318
39EC3SOFTWAREGLU F:136 , GLU F:253 , HOH F:610 , HOH F:649 , HOH F:663 , HOH F:1062BINDING SITE FOR RESIDUE CD F 319
40EC4SOFTWAREASP F:226 , HIS F:230BINDING SITE FOR RESIDUE NI F 320
41EC5SOFTWARETYR F:198 , HIS F:205BINDING SITE FOR RESIDUE NI F 321
42EC6SOFTWAREHOH F:335BINDING SITE FOR RESIDUE NI F 322
43EC7SOFTWAREGLU F:127BINDING SITE FOR RESIDUE NI F 323
44EC8SOFTWAREHIS G:96 , GLU G:98 , HOH G:580 , HOH G:597BINDING SITE FOR RESIDUE CD G 318
45EC9SOFTWAREGLU G:99 , HOH G:1361 , HOH G:1362 , GLU H:99 , HOH H:1363BINDING SITE FOR RESIDUE CD G 319
46FC1SOFTWAREGLU G:136 , GLU G:253 , HOH G:589 , HOH G:605 , HOH G:688 , HOH G:1351BINDING SITE FOR RESIDUE CD G 320
47FC2SOFTWAREGLU G:202BINDING SITE FOR RESIDUE NI G 321
48FC3SOFTWAREASP A:227 , ASP G:226 , HIS G:230 , HOH G:830BINDING SITE FOR RESIDUE NI G 322
49FC4SOFTWAREHIS G:205 , HOH G:1351BINDING SITE FOR RESIDUE NI G 323
50FC5SOFTWAREGLU G:127 , HOH G:593BINDING SITE FOR RESIDUE NI G 324
51FC6SOFTWAREHIS H:96 , GLU H:98 , HOH H:599 , HOH H:602BINDING SITE FOR RESIDUE CD H 318
52FC7SOFTWAREGLU H:136 , GLU H:253 , HOH H:583 , HOH H:824 , HOH H:826 , HOH H:1322BINDING SITE FOR RESIDUE CD H 319
53FC8SOFTWAREASP B:226 , GLU H:202 , HOH H:624 , HOH H:657BINDING SITE FOR RESIDUE NI H 320
54FC9SOFTWAREGLU H:127 , HOH H:1264 , HOH H:1265BINDING SITE FOR RESIDUE NI H 321
55GC1SOFTWAREHIS H:205 , HOH H:1230BINDING SITE FOR RESIDUE NI H 322
56GC2SOFTWAREMET H:69 , HOH H:608 , HOH H:1190BINDING SITE FOR RESIDUE NI H 323

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 3MMU)

(-) Cis Peptide Bonds  (24, 24)

Asymmetric Unit
No.Residues
1Pro A:64 -Pro A:65
2Asn A:199 -Pro A:200
3Trp A:286 -Glu A:287
4Pro B:64 -Pro B:65
5Asn B:199 -Pro B:200
6Trp B:286 -Glu B:287
7Pro C:64 -Pro C:65
8Asn C:199 -Pro C:200
9Trp C:286 -Glu C:287
10Pro D:64 -Pro D:65
11Asn D:199 -Pro D:200
12Trp D:286 -Glu D:287
13Pro E:64 -Pro E:65
14Asn E:199 -Pro E:200
15Trp E:286 -Glu E:287
16Pro F:64 -Pro F:65
17Asn F:199 -Pro F:200
18Trp F:286 -Glu F:287
19Pro G:64 -Pro G:65
20Asn G:199 -Pro G:200
21Trp G:286 -Glu G:287
22Pro H:64 -Pro H:65
23Asn H:199 -Pro H:200
24Trp H:286 -Glu H:287

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 3MMU)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 3MMU)

(-) Exons   (0, 0)

(no "Exon" information available for 3MMU)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:309
 aligned with Q9X273_THEMA | Q9X273 from UniProtKB/TrEMBL  Length:317

    Alignment length:309
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302         
         Q9X273_THEMA     3 VDPFERNKILGRGINIGNALEAPNEGDWGVVIKDEFFDIIKEAGFSHVRIPIRWSTHAYAFPPYKIMDRFFKRVDEVINGALKRGLAVVINIHHYEELMNDPEEHKERFLALWKQIADRYKDYPETLFFEILNEPHGNLTPEKWNELLEEALKVIRSIDKKHTIIIGTAEWGGISALEKLSVPKWEKNSIVTIHYYNPFEFTHQGAEWVEGSEKWLGRKWGSPDDQKHLIEEFNFIEEWSKKNKRPIYIGEFGAYRKADLESRIKWTSFVVREMEKRRWSWAYWEFCSGFGVYDTLRKTWNKDLLEALI 311
               SCOP domains d3mmua_ A: automated matches                                                                                                                                                                                                                                                                                          SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhheeee..................hhhhhhhhhh...eeee...hhhhh........hhhhhhhhhhhhhhhhh...eeeee...hhhhhhhhhhhhhhhhhhhhhhhhhhh.....eeee.........hhhhhhhhhhhhhhhhhh......eee..hhhhh...............eeeeeee..hhhhhh.......hhhhhh.....hhhhhhhhhhhhhhhhhhhhhhh..eeeeee......hhhhhhhhhhhhhhhhhhh..eeee.........ee....eehhhhhhhhh Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3mmu A   3 VDPFERNKILGRGINIGNALEAPNEGDWGVVIKDEFFDIIKEAGFSHVRIPIRWSTHAYAFPPYKIMDRFFKRVDEVINGALKRGLAVVINIHHYEELMNDPEEHKERFLALWKQIADRYKDYPETLFFEILNEPHGNLTPEKWNELLEEALKVIRSIDKKHTIIIGTAEWGGISALEKLSVPKWEKNSIVTIHYYNPFEFTHQGAEWVEGSEKWLGRKWGSPDDQKHLIEEFNFIEEWSKKNKRPIYIGEFGAYRKADLESRIKWTSFVVREMEKRRWSWAYWEFCSGFGVYDTLRKTWNKDLLEALI 311
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302         


Chain B from PDB  Type:PROTEIN  Length:309
 aligned with Q9X273_THEMA | Q9X273 from UniProtKB/TrEMBL  Length:317

    Alignment length:309
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302         
         Q9X273_THEMA     3 VDPFERNKILGRGINIGNALEAPNEGDWGVVIKDEFFDIIKEAGFSHVRIPIRWSTHAYAFPPYKIMDRFFKRVDEVINGALKRGLAVVINIHHYEELMNDPEEHKERFLALWKQIADRYKDYPETLFFEILNEPHGNLTPEKWNELLEEALKVIRSIDKKHTIIIGTAEWGGISALEKLSVPKWEKNSIVTIHYYNPFEFTHQGAEWVEGSEKWLGRKWGSPDDQKHLIEEFNFIEEWSKKNKRPIYIGEFGAYRKADLESRIKWTSFVVREMEKRRWSWAYWEFCSGFGVYDTLRKTWNKDLLEALI 311
               SCOP domains d3mmub_ B: automated matches                                                                                                                                                                                                                                                                                          SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhheeee..................hhhhhhhhhh...eeee...hhhhh........hhhhhhhhhhhhhhhhh...eeeee...hhhhhhhhhhhhhhhhhhhhhhhhhhh.....eeee.........hhhhhhhhhhhhhhhhhh......eee..hhhhh...............eeeeeee..hhhhhh.......hhhhhh.....hhhhhhhhhhhhhhhhhhhhhhh..eeeeee......hhhhhhhhhhhhhhhhhhh..eeee.........ee....eehhhhhhhhh Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3mmu B   3 VDPFERNKILGRGINIGNALEAPNEGDWGVVIKDEFFDIIKEAGFSHVRIPIRWSTHAYAFPPYKIMDRFFKRVDEVINGALKRGLAVVINIHHYEELMNDPEEHKERFLALWKQIADRYKDYPETLFFEILNEPHGNLTPEKWNELLEEALKVIRSIDKKHTIIIGTAEWGGISALEKLSVPKWEKNSIVTIHYYNPFEFTHQGAEWVEGSEKWLGRKWGSPDDQKHLIEEFNFIEEWSKKNKRPIYIGEFGAYRKADLESRIKWTSFVVREMEKRRWSWAYWEFCSGFGVYDTLRKTWNKDLLEALI 311
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302         


Chain C from PDB  Type:PROTEIN  Length:309
 aligned with Q9X273_THEMA | Q9X273 from UniProtKB/TrEMBL  Length:317

    Alignment length:309
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302         
         Q9X273_THEMA     3 VDPFERNKILGRGINIGNALEAPNEGDWGVVIKDEFFDIIKEAGFSHVRIPIRWSTHAYAFPPYKIMDRFFKRVDEVINGALKRGLAVVINIHHYEELMNDPEEHKERFLALWKQIADRYKDYPETLFFEILNEPHGNLTPEKWNELLEEALKVIRSIDKKHTIIIGTAEWGGISALEKLSVPKWEKNSIVTIHYYNPFEFTHQGAEWVEGSEKWLGRKWGSPDDQKHLIEEFNFIEEWSKKNKRPIYIGEFGAYRKADLESRIKWTSFVVREMEKRRWSWAYWEFCSGFGVYDTLRKTWNKDLLEALI 311
               SCOP domains d3mmuc_ C: automated matches                                                                                                                                                                                                                                                                                          SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhheeee..................hhhhhhhhhh...eeee...hhhhh........hhhhhhhhhhhhhhhhh...eeeee...hhhhhhhhhhhhhhhhhhhhhhhhhhh.....eeee.........hhhhhhhhhhhhhhhhhh......eee..hhhhh...............eeeeeee..hhhhhh.......hhhhhh.....hhhhhhhhhhhhhhhhhhhhhhh..eeeeee......hhhhhhhhhhhhhhhhhhh..eeee.........ee....eehhhhhhhhh Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3mmu C   3 VDPFERNKILGRGINIGNALEAPNEGDWGVVIKDEFFDIIKEAGFSHVRIPIRWSTHAYAFPPYKIMDRFFKRVDEVINGALKRGLAVVINIHHYEELMNDPEEHKERFLALWKQIADRYKDYPETLFFEILNEPHGNLTPEKWNELLEEALKVIRSIDKKHTIIIGTAEWGGISALEKLSVPKWEKNSIVTIHYYNPFEFTHQGAEWVEGSEKWLGRKWGSPDDQKHLIEEFNFIEEWSKKNKRPIYIGEFGAYRKADLESRIKWTSFVVREMEKRRWSWAYWEFCSGFGVYDTLRKTWNKDLLEALI 311
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302         


Chain D from PDB  Type:PROTEIN  Length:309
 aligned with Q9X273_THEMA | Q9X273 from UniProtKB/TrEMBL  Length:317

    Alignment length:309
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302         
         Q9X273_THEMA     3 VDPFERNKILGRGINIGNALEAPNEGDWGVVIKDEFFDIIKEAGFSHVRIPIRWSTHAYAFPPYKIMDRFFKRVDEVINGALKRGLAVVINIHHYEELMNDPEEHKERFLALWKQIADRYKDYPETLFFEILNEPHGNLTPEKWNELLEEALKVIRSIDKKHTIIIGTAEWGGISALEKLSVPKWEKNSIVTIHYYNPFEFTHQGAEWVEGSEKWLGRKWGSPDDQKHLIEEFNFIEEWSKKNKRPIYIGEFGAYRKADLESRIKWTSFVVREMEKRRWSWAYWEFCSGFGVYDTLRKTWNKDLLEALI 311
               SCOP domains d3mmud_ D: automated matches                                                                                                                                                                                                                                                                                          SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhheeee..................hhhhhhhhhh...eeee...hhhhh........hhhhhhhhhhhhhhhhh...eeeee...hhhhhhhhhhhhhhhhhhhhhhhhhhh.....eeee.........hhhhhhhhhhhhhhhhhh......eee..hhhhh...............eeeeeee..hhhhhh.......hhhhhh.....hhhhhhhhhhhhhhhhhhhhhhh..eeeeee......hhhhhhhhhhhhhhhhhhh..eeee.........ee....eehhhhhhhhh Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3mmu D   3 VDPFERNKILGRGINIGNALEAPNEGDWGVVIKDEFFDIIKEAGFSHVRIPIRWSTHAYAFPPYKIMDRFFKRVDEVINGALKRGLAVVINIHHYEELMNDPEEHKERFLALWKQIADRYKDYPETLFFEILNEPHGNLTPEKWNELLEEALKVIRSIDKKHTIIIGTAEWGGISALEKLSVPKWEKNSIVTIHYYNPFEFTHQGAEWVEGSEKWLGRKWGSPDDQKHLIEEFNFIEEWSKKNKRPIYIGEFGAYRKADLESRIKWTSFVVREMEKRRWSWAYWEFCSGFGVYDTLRKTWNKDLLEALI 311
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302         


Chain E from PDB  Type:PROTEIN  Length:309
 aligned with Q9X273_THEMA | Q9X273 from UniProtKB/TrEMBL  Length:317

    Alignment length:309
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302         
         Q9X273_THEMA     3 VDPFERNKILGRGINIGNALEAPNEGDWGVVIKDEFFDIIKEAGFSHVRIPIRWSTHAYAFPPYKIMDRFFKRVDEVINGALKRGLAVVINIHHYEELMNDPEEHKERFLALWKQIADRYKDYPETLFFEILNEPHGNLTPEKWNELLEEALKVIRSIDKKHTIIIGTAEWGGISALEKLSVPKWEKNSIVTIHYYNPFEFTHQGAEWVEGSEKWLGRKWGSPDDQKHLIEEFNFIEEWSKKNKRPIYIGEFGAYRKADLESRIKWTSFVVREMEKRRWSWAYWEFCSGFGVYDTLRKTWNKDLLEALI 311
               SCOP domains d3mmue_ E: automated matches                                                                                                                                                                                                                                                                                          SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhheeee..................hhhhhhhhhh...eeee...hhhhh........hhhhhhhhhhhhhhhhh...eeeee...hhhhhhhhhhhhhhhhhhhhhhhhhhh.....eeee.........hhhhhhhhhhhhhhhhhh......eee..hhhhh...............eeeeeee..hhhhhh.......hhhhhh.....hhhhhhhhhhhhhhhhhhhhhhh..eeeeee......hhhhhhhhhhhhhhhhhhh..eeee.........ee....eehhhhhhhhh Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3mmu E   3 VDPFERNKILGRGINIGNALEAPNEGDWGVVIKDEFFDIIKEAGFSHVRIPIRWSTHAYAFPPYKIMDRFFKRVDEVINGALKRGLAVVINIHHYEELMNDPEEHKERFLALWKQIADRYKDYPETLFFEILNEPHGNLTPEKWNELLEEALKVIRSIDKKHTIIIGTAEWGGISALEKLSVPKWEKNSIVTIHYYNPFEFTHQGAEWVEGSEKWLGRKWGSPDDQKHLIEEFNFIEEWSKKNKRPIYIGEFGAYRKADLESRIKWTSFVVREMEKRRWSWAYWEFCSGFGVYDTLRKTWNKDLLEALI 311
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302         


Chain F from PDB  Type:PROTEIN  Length:309
 aligned with Q9X273_THEMA | Q9X273 from UniProtKB/TrEMBL  Length:317

    Alignment length:309
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302         
         Q9X273_THEMA     3 VDPFERNKILGRGINIGNALEAPNEGDWGVVIKDEFFDIIKEAGFSHVRIPIRWSTHAYAFPPYKIMDRFFKRVDEVINGALKRGLAVVINIHHYEELMNDPEEHKERFLALWKQIADRYKDYPETLFFEILNEPHGNLTPEKWNELLEEALKVIRSIDKKHTIIIGTAEWGGISALEKLSVPKWEKNSIVTIHYYNPFEFTHQGAEWVEGSEKWLGRKWGSPDDQKHLIEEFNFIEEWSKKNKRPIYIGEFGAYRKADLESRIKWTSFVVREMEKRRWSWAYWEFCSGFGVYDTLRKTWNKDLLEALI 311
               SCOP domains d3mmuf_ F: automated matches                                                                                                                                                                                                                                                                                          SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhheeee..................hhhhhhhhhh...eeee...hhhhh........hhhhhhhhhhhhhhhhh...eeeee...hhhhhhhhhhhhhhhhhhhhhhhhhhh.....eeee.........hhhhhhhhhhhhhhhhhh......eee..hhhhh...............eeeeeee..hhhhhh.......hhhhhh.....hhhhhhhhhhhhhhhhhhhhhhh..eeeeee......hhhhhhhhhhhhhhhhhhh..eeee.........ee....eehhhhhhhhh Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3mmu F   3 VDPFERNKILGRGINIGNALEAPNEGDWGVVIKDEFFDIIKEAGFSHVRIPIRWSTHAYAFPPYKIMDRFFKRVDEVINGALKRGLAVVINIHHYEELMNDPEEHKERFLALWKQIADRYKDYPETLFFEILNEPHGNLTPEKWNELLEEALKVIRSIDKKHTIIIGTAEWGGISALEKLSVPKWEKNSIVTIHYYNPFEFTHQGAEWVEGSEKWLGRKWGSPDDQKHLIEEFNFIEEWSKKNKRPIYIGEFGAYRKADLESRIKWTSFVVREMEKRRWSWAYWEFCSGFGVYDTLRKTWNKDLLEALI 311
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302         


Chain G from PDB  Type:PROTEIN  Length:309
 aligned with Q9X273_THEMA | Q9X273 from UniProtKB/TrEMBL  Length:317

    Alignment length:309
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302         
         Q9X273_THEMA     3 VDPFERNKILGRGINIGNALEAPNEGDWGVVIKDEFFDIIKEAGFSHVRIPIRWSTHAYAFPPYKIMDRFFKRVDEVINGALKRGLAVVINIHHYEELMNDPEEHKERFLALWKQIADRYKDYPETLFFEILNEPHGNLTPEKWNELLEEALKVIRSIDKKHTIIIGTAEWGGISALEKLSVPKWEKNSIVTIHYYNPFEFTHQGAEWVEGSEKWLGRKWGSPDDQKHLIEEFNFIEEWSKKNKRPIYIGEFGAYRKADLESRIKWTSFVVREMEKRRWSWAYWEFCSGFGVYDTLRKTWNKDLLEALI 311
               SCOP domains d3mmug_ G: automated matches                                                                                                                                                                                                                                                                                          SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhheeee..................hhhhhhhhhh...eeee...hhhhh........hhhhhhhhhhhhhhhhh...eeeee...hhhhhhhhhhhhhhhhhhhhhhhhhhh.....eeee.........hhhhhhhhhhhhhhhhhh......eee..hhhhh...............eeeeeee..hhhhhh.......hhhhhh.....hhhhhhhhhhhhhhhhhhhhhhh..eeeeee......hhhhhhhhhhhhhhhhhhh..eeee.........ee....eehhhhhhhhh Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3mmu G   3 VDPFERNKILGRGINIGNALEAPNEGDWGVVIKDEFFDIIKEAGFSHVRIPIRWSTHAYAFPPYKIMDRFFKRVDEVINGALKRGLAVVINIHHYEELMNDPEEHKERFLALWKQIADRYKDYPETLFFEILNEPHGNLTPEKWNELLEEALKVIRSIDKKHTIIIGTAEWGGISALEKLSVPKWEKNSIVTIHYYNPFEFTHQGAEWVEGSEKWLGRKWGSPDDQKHLIEEFNFIEEWSKKNKRPIYIGEFGAYRKADLESRIKWTSFVVREMEKRRWSWAYWEFCSGFGVYDTLRKTWNKDLLEALI 311
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302         


Chain H from PDB  Type:PROTEIN  Length:309
 aligned with Q9X273_THEMA | Q9X273 from UniProtKB/TrEMBL  Length:317

    Alignment length:309
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302         
         Q9X273_THEMA     3 VDPFERNKILGRGINIGNALEAPNEGDWGVVIKDEFFDIIKEAGFSHVRIPIRWSTHAYAFPPYKIMDRFFKRVDEVINGALKRGLAVVINIHHYEELMNDPEEHKERFLALWKQIADRYKDYPETLFFEILNEPHGNLTPEKWNELLEEALKVIRSIDKKHTIIIGTAEWGGISALEKLSVPKWEKNSIVTIHYYNPFEFTHQGAEWVEGSEKWLGRKWGSPDDQKHLIEEFNFIEEWSKKNKRPIYIGEFGAYRKADLESRIKWTSFVVREMEKRRWSWAYWEFCSGFGVYDTLRKTWNKDLLEALI 311
               SCOP domains d3mmuh_ H: automated matches                                                                                                                                                                                                                                                                                          SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
           Pfam domains (1) ----------Cellulase-3mmuH01 H:13-291                                                                                                                                                                                                                                                             -------------------- Pfam domains (1)
           Pfam domains (2) ----------Cellulase-3mmuH02 H:13-291                                                                                                                                                                                                                                                             -------------------- Pfam domains (2)
           Pfam domains (3) ----------Cellulase-3mmuH03 H:13-291                                                                                                                                                                                                                                                             -------------------- Pfam domains (3)
           Pfam domains (4) ----------Cellulase-3mmuH04 H:13-291                                                                                                                                                                                                                                                             -------------------- Pfam domains (4)
           Pfam domains (5) ----------Cellulase-3mmuH05 H:13-291                                                                                                                                                                                                                                                             -------------------- Pfam domains (5)
           Pfam domains (6) ----------Cellulase-3mmuH06 H:13-291                                                                                                                                                                                                                                                             -------------------- Pfam domains (6)
           Pfam domains (7) ----------Cellulase-3mmuH07 H:13-291                                                                                                                                                                                                                                                             -------------------- Pfam domains (7)
           Pfam domains (8) ----------Cellulase-3mmuH08 H:13-291                                                                                                                                                                                                                                                             -------------------- Pfam domains (8)
         Sec.struct. author .hhhhhhhhhheeee..................hhhhhhhhhh...eeee...hhhhh........hhhhhhhhhhhhhhhhh...eeeee...hhhhhhhhhhhhhhhhhhhhhhhhhhh.....eeee.........hhhhhhhhhhhhhhhhhh......eee..hhhhh...............eeeeeee..hhhhhh........hhhhh.....hhhhhhhhhhhhhhhhhhhhhhh..eeeeee......hhhhhhhhhhhhhhhhhhh..eeee.........ee....eehhhhhhhhh Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3mmu H   3 VDPFERNKILGRGINIGNALEAPNEGDWGVVIKDEFFDIIKEAGFSHVRIPIRWSTHAYAFPPYKIMDRFFKRVDEVINGALKRGLAVVINIHHYEELMNDPEEHKERFLALWKQIADRYKDYPETLFFEILNEPHGNLTPEKWNELLEEALKVIRSIDKKHTIIIGTAEWGGISALEKLSVPKWEKNSIVTIHYYNPFEFTHQGAEWVEGSEKWLGRKWGSPDDQKHLIEEFNFIEEWSKKNKRPIYIGEFGAYRKADLESRIKWTSFVVREMEKRRWSWAYWEFCSGFGVYDTLRKTWNKDLLEALI 311
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (1, 8)

Asymmetric Unit
(-)
Class: Alpha and beta proteins (a/b) (23833)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 3MMU)

(-) Pfam Domains  (1, 8)

Asymmetric Unit
(-)
Clan: Glyco_hydro_tim (488)

(-) Gene Ontology  (10, 10)

Asymmetric Unit(hide GO term definitions)
Chain A,B,C,D,E,F,G,H   (Q9X273_THEMA | Q9X273)
molecular function
    GO:0008422    beta-glucosidase activity    Catalysis of the hydrolysis of terminal, non-reducing beta-D-glucose residues with release of beta-D-glucose.
    GO:0016787    hydrolase activity    Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3.
    GO:0016798    hydrolase activity, acting on glycosyl bonds    Catalysis of the hydrolysis of any glycosyl bond.
    GO:0004553    hydrolase activity, hydrolyzing O-glycosyl compounds    Catalysis of the hydrolysis of any O-glycosyl bond.
biological process
    GO:0005975    carbohydrate metabolic process    The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule.
    GO:0006073    cellular glucan metabolic process    The chemical reactions and pathways involving glucans, polysaccharides consisting only of glucose residues, occurring at the level of an individual cell.
    GO:0009251    glucan catabolic process    The chemical reactions and pathways resulting in the breakdown of glucans, polysaccharides consisting only of glucose residues.
    GO:0008152    metabolic process    The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.
cellular component
    GO:0009986    cell surface    The external part of the cell wall and/or plasma membrane.
    GO:0005576    extracellular region    The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite.

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/TrEMBL
        Q9X273_THEMA | Q9X273: 3amc 3amd 3amg 3aof 3azr 3azs 3azt 3mmw

(-) Related Entries Specified in the PDB File

3mmw