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(-) Description

Title :  ALLOPHANATE HYDROLASE COMPLEX FROM MYCOBACTERIUM SMEGMATIS, MSMEG0435-MSMEG0436
 
Authors :  M. Kaufmann, I. Chernishof, A. Shin, D. Germano, M. R. Sawaya, G. S. Wald M. A. Arbing, J. Perry, D. Eisenberg, Integrated Center For Struct Function Innovation (Isfi), Tb Structural Genomics Consortiu
Date :  20 Apr 10  (Deposition) - 28 Apr 10  (Release) - 08 Sep 10  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.50
Chains :  Asym. Unit :  A,B,C,D,E,F,G,H
Biol. Unit 1:  A,B,C,D  (1x)
Biol. Unit 2:  E,F,G,H  (1x)
Biol. Unit 3:  A,B  (1x)
Biol. Unit 4:  C,D  (1x)
Biol. Unit 5:  E,F  (1x)
Biol. Unit 6:  G,H  (1x)
Keywords :  Structural Genomics, Psi-2, Protein Structure Initiative, Tuberculosis Structural Genomics Consortium, Integrated Center For Structure And Function Innovation, Isfi, Tb Structural Genomics Consortium, Tbsgc, Hydrolase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  M. Kaufmann, I. Chernishof, A. Shin, D. Germano, M. R. Sawaya, G. S. Waldo, M. A. Arbing, J. Perry, D. Eisenberg
Crystal Structure Of Allphanate Hydrolase Complex From M. Smegmatis, Msmeg0435-Msmeg0436
To Be Published
PubMed: search

(-) Compounds

Molecule 1 - ALLOPHANATE HYDROLASE SUBUNIT 2
    Chains: A, C, E, G
    EC Number: 3.5.1.54
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: MODIFIED PET-DUET-1
    Expression System Strain: BL21 GOLD (DE3)
    Expression System Taxid: 469008
    Expression System Vector Type: PLASMID
    Gene: MSMEG0435, MSMEG_0435
    Organism Scientific: MYCOBACTERIUM SMEGMATIS
    Organism Taxid: 246196
    Strain: MC2 155
 
Molecule 2 - ALLOPHANATE HYDROLASE SUBUNIT 1
    Chains: B, D, F, H
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: MODIFIED PET-DUET-1
    Expression System Strain: BL21 GOLD (DE3)
    Expression System Taxid: 469008
    Expression System Vector Type: PLASMID
    Gene: MSMEG0436, MSMEG_0436
    Organism Scientific: MYCOBACTERIUM SMEGMATIS
    Organism Taxid: 246196
    Strain: MC2 155

 Structural Features

(-) Chains, Units

  12345678
Asymmetric Unit : ABCDEFGH
Biological Unit 1 (1x): ABCD    
Biological Unit 2 (1x):     EFGH
Biological Unit 3 (1x): AB      
Biological Unit 4 (1x):   CD    
Biological Unit 5 (1x):     EF  
Biological Unit 6 (1x):       GH

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (2, 29)

Asymmetric Unit (2, 29)
No.NameCountTypeFull Name
1CL1Ligand/IonCHLORIDE ION
2MSE28Mod. Amino AcidSELENOMETHIONINE
Biological Unit 1 (1, 14)
No.NameCountTypeFull Name
1CL-1Ligand/IonCHLORIDE ION
2MSE14Mod. Amino AcidSELENOMETHIONINE
Biological Unit 2 (1, 14)
No.NameCountTypeFull Name
1CL-1Ligand/IonCHLORIDE ION
2MSE14Mod. Amino AcidSELENOMETHIONINE
Biological Unit 3 (1, 7)
No.NameCountTypeFull Name
1CL-1Ligand/IonCHLORIDE ION
2MSE7Mod. Amino AcidSELENOMETHIONINE
Biological Unit 4 (1, 7)
No.NameCountTypeFull Name
1CL-1Ligand/IonCHLORIDE ION
2MSE7Mod. Amino AcidSELENOMETHIONINE
Biological Unit 5 (1, 7)
No.NameCountTypeFull Name
1CL-1Ligand/IonCHLORIDE ION
2MSE7Mod. Amino AcidSELENOMETHIONINE
Biological Unit 6 (1, 7)
No.NameCountTypeFull Name
1CL-1Ligand/IonCHLORIDE ION
2MSE7Mod. Amino AcidSELENOMETHIONINE

(-) Sites  (1, 1)

Asymmetric Unit (1, 1)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREPRO B:56 , ARG B:57BINDING SITE FOR RESIDUE CL B 211

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 3MML)

(-) Cis Peptide Bonds  (5, 5)

Asymmetric Unit
No.Residues
1Phe A:160 -Pro A:161
2Gly A:183 -Pro A:184
3Gly C:183 -Pro C:184
4Gly E:183 -Pro E:184
5Gly G:183 -Pro G:184

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 3MML)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 3MML)

(-) Exons   (0, 0)

(no "Exon" information available for 3MML)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:289
 aligned with A0QPL0_MYCS2 | A0QPL0 from UniProtKB/TrEMBL  Length:294

    Alignment length:289
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281         
         A0QPL0_MYCS2     2 GTTLEVLRTGPLALVEDLGRPGLAHMGVTRSGAADRRSHTLANRLVANPGESATIEVTFGGFSARVCGGDVAIAVTGADTDPAVNGIPFGTNSIHHVHDGQVISLGAPHSGLRSYLAVRGGIDVTPVLGSRSYDVMSAIGPSPLRPGDVLPVGEHTDEFPELDQAPVAAIAEDVVELQVVPGPRDDWFVDPDILVRTNWLVTNRSDRVGMRLVGMPLEYRNPDRQLPSEGATRGAIQVPPNGFPVILGPDHPVTGGYPVIGVVTEEDIDKLGQVRPGQTVRLHWAYPRR 290
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeeee...eeeee......hhhhh.......hhhhhhhhhhhh.......eeeee....eeeee...eeeeeee.....ee..ee......eee....eee........eeeeee..............................eee......................eeeeeeee..hhhhh.hhhhhhh..eee.......eeeee...............ee....eee.......eee......ee...eeeeehhhhhhhhhhh....eeeeee..... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3mml A   2 GTTLEVLRTGPLALVEDLGRPGLAHmGVTRSGAADRRSHTLANRLVANPGESATIEVTFGGFSARVCGGDVAIAVTGADTDPAVNGIPFGTNSIHHVHDGQVISLGAPHSGLRSYLAVRGGIDVTPVLGSRSYDVmSAIGPSPLRPGDVLPVGEHTDEFPELDQAPVAAIAEDVVELQVVPGPRDDWFVDPDILVRTNWLVTNRSDRVGmRLVGmPLEYRNPDRQLPSEGATRGAIQVPPNGFPVILGPDHPVTGGYPVIGVVTEEDIDKLGQVRPGQTVRLHWAYPRR 290
                                    11        21     |  31        41        51        61        71        81        91       101       111       121       131     | 141       151       161       171       181       191       201       211    |  221       231       241       251       261       271       281         
                                                    27-MSE                                                                                                       137-MSE                                                                   211-MSE|                                                                          
                                                                                                                                                                                                                                                216-MSE                                                                      


Chain B from PDB  Type:PROTEIN  Length:210
 aligned with A0QPL1_MYCS2 | A0QPL1 from UniProtKB/TrEMBL  Length:210

    Alignment length:210
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210
         A0QPL1_MYCS2     1 MTLGTVHNYGDQALLLEFDSTAEVLAWTETLREAELLGVVDIVPAARTVLVKLAGPRYQAPTRQRLGKLRVRPEAITHQPPGDRVDVTIDVVYDGADLHEVASLTGMTPAQVIAAHTGTPWRVGFCGFAPGFAYLVDGDARLQVPRRAEPRTSVPAGAVALAGEFSGVYPRQSPGGWQLIGHTDAVMFDVNRDKPALLTPGMWVQFRAVG 210
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .....eee....eeeee..hhhhhhhhhhhhhhhh...eeeeee...eeeeee.hhhhhhhhhhhhh............hhhhh..eeeeee....hhhhhhhhhh.hhhhhhhhhhhh.eeeeee......eeee..hhhhh.......eeee...eeeee..eeee....eee..eeeeee...................eeeeee.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 3mml B   1 STLGTVHNYGDQALLLEFDSTAEVLAWTETLREAELLGVVDIVPAARTVLVKLAGPRYQAPTRQRLGKLRVRPEAITHQPPGDRVDVTIDVVYDGADLHEVASLTGmTPAQVIAAHTGTPWRVGFCGFAPGFAYLVDGDARLQVPRRAEPRTSVPAGAVALAGEFSGVYPRQSPGGWQLIGHTDAVmFDVNRDKPALLTPGmWVQFRAVG 210
                                    10        20        30        40        50        60        70        80        90       100      |110       120       130       140       150       160       170       180      |190       200 |     210
                                                                                                                                    107-MSE                                                                         187-MSE        202-MSE    


Chain C from PDB  Type:PROTEIN  Length:290
 aligned with A0QPL0_MYCS2 | A0QPL0 from UniProtKB/TrEMBL  Length:294

    Alignment length:290
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291
         A0QPL0_MYCS2     2 GTTLEVLRTGPLALVEDLGRPGLAHMGVTRSGAADRRSHTLANRLVANPGESATIEVTFGGFSARVCGGDVAIAVTGADTDPAVNGIPFGTNSIHHVHDGQVISLGAPHSGLRSYLAVRGGIDVTPVLGSRSYDVMSAIGPSPLRPGDVLPVGEHTDEFPELDQAPVAAIAEDVVELQVVPGPRDDWFVDPDILVRTNWLVTNRSDRVGMRLVGMPLEYRNPDRQLPSEGATRGAIQVPPNGFPVILGPDHPVTGGYPVIGVVTEEDIDKLGQVRPGQTVRLHWAYPRRP 291
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeeee...eeeee......hhhhh.......hhhhhhhhhhhh.......eeeee....eeeee...eeeeeee.....ee..ee......eee....eee........eeeeee..............................eee.......................eeeeeee..hhhhh.hhhhhhh..eee.......eeeee...............ee....eee.......eee......ee...eeeee.hhhhhhhhhh....eeeeee...... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3mml C   2 GTTLEVLRTGPLALVEDLGRPGLAHmGVTRSGAADRRSHTLANRLVANPGESATIEVTFGGFSARVCGGDVAIAVTGADTDPAVNGIPFGTNSIHHVHDGQVISLGAPHSGLRSYLAVRGGIDVTPVLGSRSYDVmSAIGPSPLRPGDVLPVGEHTDEFPELDQAPVAAIAEDVVELQVVPGPRDDWFVDPDILVRTNWLVTNRSDRVGmRLVGmPLEYRNPDRQLPSEGATRGAIQVPPNGFPVILGPDHPVTGGYPVIGVVTEEDIDKLGQVRPGQTVRLHWAYPRRP 291
                                    11        21     |  31        41        51        61        71        81        91       101       111       121       131     | 141       151       161       171       181       191       201       211    |  221       231       241       251       261       271       281       291
                                                    27-MSE                                                                                                       137-MSE                                                                   211-MSE|                                                                           
                                                                                                                                                                                                                                                216-MSE                                                                       


Chain D from PDB  Type:PROTEIN  Length:209
 aligned with A0QPL1_MYCS2 | A0QPL1 from UniProtKB/TrEMBL  Length:210

    Alignment length:209
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200         
         A0QPL1_MYCS2     1 MTLGTVHNYGDQALLLEFDSTAEVLAWTETLREAELLGVVDIVPAARTVLVKLAGPRYQAPTRQRLGKLRVRPEAITHQPPGDRVDVTIDVVYDGADLHEVASLTGMTPAQVIAAHTGTPWRVGFCGFAPGFAYLVDGDARLQVPRRAEPRTSVPAGAVALAGEFSGVYPRQSPGGWQLIGHTDAVMFDVNRDKPALLTPGMWVQFRAV 209
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .....eee....eeeee..hhhhhhhhhhhhhhhh...eeeeee...eeeeee.hhhhhhhhhhhhhh...hhhhh..........eeeeee....hhhhhhhhhh.hhhhhhhhhhhh.eeeeee......eeee..hhhhh.......eeee...eeeee..eeee....eee..eeeeee...................eeeeee. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3mml D   1 STLGTVHNYGDQALLLEFDSTAEVLAWTETLREAELLGVVDIVPAARTVLVKLAGPRYQAPTRQRLGKLRVRPEAITHQPPGDRVDVTIDVVYDGADLHEVASLTGmTPAQVIAAHTGTPWRVGFCGFAPGFAYLVDGDARLQVPRRAEPRTSVPAGAVALAGEFSGVYPRQSPGGWQLIGHTDAVmFDVNRDKPALLTPGmWVQFRAV 209
                                    10        20        30        40        50        60        70        80        90       100      |110       120       130       140       150       160       170       180      |190       200 |       
                                                                                                                                    107-MSE                                                                         187-MSE        202-MSE   


Chain E from PDB  Type:PROTEIN  Length:292
 aligned with A0QPL0_MYCS2 | A0QPL0 from UniProtKB/TrEMBL  Length:294

    Alignment length:292
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291  
         A0QPL0_MYCS2     2 GTTLEVLRTGPLALVEDLGRPGLAHMGVTRSGAADRRSHTLANRLVANPGESATIEVTFGGFSARVCGGDVAIAVTGADTDPAVNGIPFGTNSIHHVHDGQVISLGAPHSGLRSYLAVRGGIDVTPVLGSRSYDVMSAIGPSPLRPGDVLPVGEHTDEFPELDQAPVAAIAEDVVELQVVPGPRDDWFVDPDILVRTNWLVTNRSDRVGMRLVGMPLEYRNPDRQLPSEGATRGAIQVPPNGFPVILGPDHPVTGGYPVIGVVTEEDIDKLGQVRPGQTVRLHWAYPRRPFE 293
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeeee...eeeee......hhhhh.......hhhhhhhhhhhh.......eeeee....eeeee...eeeeeee.....ee..ee......eee....eee........eeeeee..............................eee.......................eeeeeee..hhhhh.hhhhhhh..eee.......eeeee...............ee....eee.......eee......ee...eeeeehhhhhhhhhhh....eeeeee........ Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3mml E   2 GTTLEVLRTGPLALVEDLGRPGLAHmGVTRSGAADRRSHTLANRLVANPGESATIEVTFGGFSARVCGGDVAIAVTGADTDPAVNGIPFGTNSIHHVHDGQVISLGAPHSGLRSYLAVRGGIDVTPVLGSRSYDVmSAIGPSPLRPGDVLPVGEHTDEFPELDQAPVAAIAEDVVELQVVPGPRDDWFVDPDILVRTNWLVTNRSDRVGmRLVGmPLEYRNPDRQLPSEGATRGAIQVPPNGFPVILGPDHPVTGGYPVIGVVTEEDIDKLGQVRPGQTVRLHWAYPRRPFE 293
                                    11        21     |  31        41        51        61        71        81        91       101       111       121       131     | 141       151       161       171       181       191       201       211    |  221       231       241       251       261       271       281       291  
                                                    27-MSE                                                                                                       137-MSE                                                                   211-MSE|                                                                             
                                                                                                                                                                                                                                                216-MSE                                                                         


Chain F from PDB  Type:PROTEIN  Length:210
 aligned with A0QPL1_MYCS2 | A0QPL1 from UniProtKB/TrEMBL  Length:210

    Alignment length:210
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210
         A0QPL1_MYCS2     1 MTLGTVHNYGDQALLLEFDSTAEVLAWTETLREAELLGVVDIVPAARTVLVKLAGPRYQAPTRQRLGKLRVRPEAITHQPPGDRVDVTIDVVYDGADLHEVASLTGMTPAQVIAAHTGTPWRVGFCGFAPGFAYLVDGDARLQVPRRAEPRTSVPAGAVALAGEFSGVYPRQSPGGWQLIGHTDAVMFDVNRDKPALLTPGMWVQFRAVG 210
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .....eee....eeeee..hhhhhhhhhhhhhhhh...eeeeee...eeeeee.hhhhhhhhhhhhh...................eeeeee....hhhhhhhhhh.hhhhhhhhhhhh.eeeeee......eeee..hhhhh.......eeee...eeeee..eeee....eee..eeeee....................eeeeeeee Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 3mml F   1 STLGTVHNYGDQALLLEFDSTAEVLAWTETLREAELLGVVDIVPAARTVLVKLAGPRYQAPTRQRLGKLRVRPEAITHQPPGDRVDVTIDVVYDGADLHEVASLTGmTPAQVIAAHTGTPWRVGFCGFAPGFAYLVDGDARLQVPRRAEPRTSVPAGAVALAGEFSGVYPRQSPGGWQLIGHTDAVmFDVNRDKPALLTPGmWVQFRAVG 210
                                    10        20        30        40        50        60        70        80        90       100      |110       120       130       140       150       160       170       180      |190       200 |     210
                                                                                                                                    107-MSE                                                                         187-MSE        202-MSE    


Chain G from PDB  Type:PROTEIN  Length:288
 aligned with A0QPL0_MYCS2 | A0QPL0 from UniProtKB/TrEMBL  Length:294

    Alignment length:288
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281        
         A0QPL0_MYCS2     2 GTTLEVLRTGPLALVEDLGRPGLAHMGVTRSGAADRRSHTLANRLVANPGESATIEVTFGGFSARVCGGDVAIAVTGADTDPAVNGIPFGTNSIHHVHDGQVISLGAPHSGLRSYLAVRGGIDVTPVLGSRSYDVMSAIGPSPLRPGDVLPVGEHTDEFPELDQAPVAAIAEDVVELQVVPGPRDDWFVDPDILVRTNWLVTNRSDRVGMRLVGMPLEYRNPDRQLPSEGATRGAIQVPPNGFPVILGPDHPVTGGYPVIGVVTEEDIDKLGQVRPGQTVRLHWAYPR 289
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
           Pfam domains (1) ------------------------AHS2-3mmlG01 G:26-289                                                                                                                                                                                                                                                    Pfam domains (1)
           Pfam domains (2) ------------------------AHS2-3mmlG02 G:26-289                                                                                                                                                                                                                                                    Pfam domains (2)
           Pfam domains (3) ------------------------AHS2-3mmlG03 G:26-289                                                                                                                                                                                                                                                    Pfam domains (3)
           Pfam domains (4) ------------------------AHS2-3mmlG04 G:26-289                                                                                                                                                                                                                                                    Pfam domains (4)
         Sec.struct. author ..eeeeee...eeeee......hhhhh.......hhhhhhhhhhhh.......eeeee....eeeee...eeeeeee.....ee..ee......eee....eee........eeeeee..............................eee.......................eeeeeee..hhhhh.hhhhhhh..eee.......eeeee...............ee....eee.......eee......ee...eeeee...hhhhhh......eeeeee.... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 3mml G   2 GTTLEVLRTGPLALVEDLGRPGLAHmGVTRSGAADRRSHTLANRLVANPGESATIEVTFGGFSARVCGGDVAIAVTGADTDPAVNGIPFGTNSIHHVHDGQVISLGAPHSGLRSYLAVRGGIDVTPVLGSRSYDVmSAIGPSPLRPGDVLPVGEHTDEFPELDQAPVAAIAEDVVELQVVPGPRDDWFVDPDILVRTNWLVTNRSDRVGmRLVGmPLEYRNPDRQLPSEGATRGAIQVPPNGFPVILGPDHPVTGGYPVIGVVTEEDIDKLGQVRPGQTVRLHWAYPR 289
                                    11        21     |  31        41        51        61        71        81        91       101       111       121       131     | 141       151       161       171       181       191       201       211    |  221       231       241       251       261       271       281        
                                                    27-MSE                                                                                                       137-MSE                                                                   211-MSE|                                                                         
                                                                                                                                                                                                                                                216-MSE                                                                     


Chain H from PDB  Type:PROTEIN  Length:209
 aligned with A0QPL1_MYCS2 | A0QPL1 from UniProtKB/TrEMBL  Length:210

    Alignment length:209
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200         
         A0QPL1_MYCS2     1 MTLGTVHNYGDQALLLEFDSTAEVLAWTETLREAELLGVVDIVPAARTVLVKLAGPRYQAPTRQRLGKLRVRPEAITHQPPGDRVDVTIDVVYDGADLHEVASLTGMTPAQVIAAHTGTPWRVGFCGFAPGFAYLVDGDARLQVPRRAEPRTSVPAGAVALAGEFSGVYPRQSPGGWQLIGHTDAVMFDVNRDKPALLTPGMWVQFRAV 209
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
           Pfam domains (1) ---AHS1-3mmlH01 H:4-198                                                                                                                                                                               ----------- Pfam domains (1)
           Pfam domains (2) ---AHS1-3mmlH02 H:4-198                                                                                                                                                                               ----------- Pfam domains (2)
           Pfam domains (3) ---AHS1-3mmlH03 H:4-198                                                                                                                                                                               ----------- Pfam domains (3)
           Pfam domains (4) ---AHS1-3mmlH04 H:4-198                                                                                                                                                                               ----------- Pfam domains (4)
         Sec.struct. author .....eee....eeeee..hhhhhhhhhhhhhhhh...eeeeee...eeeeee.hhhhhhhhhhhhhhh..hhhhh...hhhhh..eeeeee....hhhhhhhhhh.hhhhhhhhhhhh.eeeeee......eeee..hhhhh.......eeee...eeeee..eeee....eee..eeeeee...................eeeeee. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3mml H   1 STLGTVHNYGDQALLLEFDSTAEVLAWTETLREAELLGVVDIVPAARTVLVKLAGPRYQAPTRQRLGKLRVRPEAITHQPPGDRVDVTIDVVYDGADLHEVASLTGmTPAQVIAAHTGTPWRVGFCGFAPGFAYLVDGDARLQVPRRAEPRTSVPAGAVALAGEFSGVYPRQSPGGWQLIGHTDAVmFDVNRDKPALLTPGmWVQFRAV 209
                                    10        20        30        40        50        60        70        80        90       100      |110       120       130       140       150       160       170       180      |190       200 |       
                                                                                                                                    107-MSE                                                                         187-MSE        202-MSE
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 3MML)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 3MML)

(-) Pfam Domains  (2, 8)

Asymmetric Unit
(-)
Clan: Cyclophil-like (65)
(-)
Clan: no clan defined [family: AHS2] (4)

(-) Gene Ontology  (3, 4)

Asymmetric Unit(hide GO term definitions)
Chain A,C,E,G   (A0QPL0_MYCS2 | A0QPL0)
molecular function
    GO:0004039    allophanate hydrolase activity    Catalysis of the reaction: H(2)O + 3 H(+) + urea-1-carboxylate = 2 CO(2) + 2 NH(4)(+).
    GO:0016787    hydrolase activity    Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3.
    GO:0016829    lyase activity    Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring.

Chain B,D,F,H   (A0QPL1_MYCS2 | A0QPL1)
molecular function
    GO:0016787    hydrolase activity    Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3.

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