Chain A from PDB Type:PROTEIN Length:91
aligned with O25025_HELPY | O25025 from UniProtKB/TrEMBL Length:94
Alignment length:91
12 22 32 42 52 62 72 82 92
O25025_HELPY 3 DYSELEIFEGNPLDKWNDIIFHASKKLSKKELERLLELLALLETFIEKEDLEEKFESFAKALRIDEELQQKIESRKTDIVIQSMANILSGN 93
SCOP domains d3mlia_ A: Hypothetical protein HP0242 SCOP domains
CATH domains ------------------------------------------------------------------------------------------- CATH domains
Pfam domains ------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author hhhhh.....hhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ------------------------------------------------------------------------------------------- PROSITE
Transcript ------------------------------------------------------------------------------------------- Transcript
3mli A 3 DYSELEIFEGNPLDKWNDIIFHASKKLSKKELERLLELLALCETFIEKEDLEEKFESFAKALRIDEELQQKIESRKTDIVIQSMANILSGL 93
12 22 32 42 52 62 72 82 92
Chain B from PDB Type:PROTEIN Length:85
aligned with O25025_HELPY | O25025 from UniProtKB/TrEMBL Length:94
Alignment length:85
94
22 32 42 52 62 72 82 92 |
O25025_HELPY 13 NPLDKWNDIIFHASKKLSKKELERLLELLALLETFIEKEDLEEKFESFAKALRIDEELQQKIESRKTDIVIQSMANILSGNE--- -
SCOP domains d3mlib_ B: Hypothetical protein HP0242 SCOP domains
CATH domains ------------------------------------------------------------------------------------- CATH domains
Pfam domains ------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh. Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ------------------------------------------------------------------------------------- PROSITE
Transcript ------------------------------------------------------------------------------------- Transcript
3mli B 13 NPLDKWNDIIFHASKKLSKKELERLLELLALCETFIEKEDLEEKFESFAKALRIDEELQQKIESRKTDIVIQSMANILSGLEHHH 97
22 32 42 52 62 72 82 92
Chain C from PDB Type:PROTEIN Length:89
aligned with O25025_HELPY | O25025 from UniProtKB/TrEMBL Length:94
Alignment length:89
94
20 30 40 50 60 70 80 90 |
O25025_HELPY 11 EGNPLDKWNDIIFHASKKLSKKELERLLELLALLETFIEKEDLEEKFESFAKALRIDEELQQKIESRKTDIVIQSMANILSGNE----- -
SCOP domains d3mlic_ C: Hypothetical protein HP0242 SCOP domains
CATH domains ----------------------------------------------------------------------------------------- CATH domains
Pfam domains ----------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhhh.... Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ----------------------------------------------------------------------------------------- PROSITE
Transcript ----------------------------------------------------------------------------------------- Transcript
3mli C 11 EGNPLDKWNDIIFHASKKLSKKELERLLELLALCETFIEKEDLEEKFESFAKALRIDEELQQKIESRKTDIVIQSMANILSGLEHHHHH 99
20 30 40 50 60 70 80 90
Chain D from PDB Type:PROTEIN Length:94
aligned with O25025_HELPY | O25025 from UniProtKB/TrEMBL Length:94
Alignment length:94
94
12 22 32 42 52 62 72 82 92 |
O25025_HELPY 3 DYSELEIFEGNPLDKWNDIIFHASKKLSKKELERLLELLALLETFIEKEDLEEKFESFAKALRIDEELQQKIESRKTDIVIQSMANILSGNE-- -
SCOP domains d3mlid_ D: Hypothetical protein HP0242 SCOP domains
CATH domains ---------------------------------------------------------------------------------------------- CATH domains
Pfam domains (1) -------DUF2018-3mliD01 D:10-92 ---- Pfam domains (1)
Pfam domains (2) -------DUF2018-3mliD02 D:10-92 ---- Pfam domains (2)
Pfam domains (3) -------DUF2018-3mliD03 D:10-92 ---- Pfam domains (3)
Pfam domains (4) -------DUF2018-3mliD04 D:10-92 ---- Pfam domains (4)
Sec.struct. author hhhhh.....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhh... Sec.struct. author
SAPs(SNPs) ---------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ---------------------------------------------------------------------------------------------- PROSITE
Transcript ---------------------------------------------------------------------------------------------- Transcript
3mli D 3 DYSELEIFEGNPLDKWNDIIFHASKKLSKKELERLLELLALCETFIEKEDLEEKFESFAKALRIDEELQQKIESRKTDIVIQSMANILSGLEHH 96
12 22 32 42 52 62 72 82 92
Legend: |
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→ Mismatch |
(orange background) |
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- |
→ Gap |
(green background, '-', border residues have a numbering label) |
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→ Modified Residue |
(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name) |
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x |
→ Chemical Group |
(purple background, 'x', labelled with number + name, e.g. ACE or NH2) |
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extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|' |