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(-) Description

Title :  CRYSTAL STRUCTURE OF PLANT SLAC1 HOMOLOG TEHA
 
Authors :  Y. -H. Chen, W. A. Hendrickson, New York Consortium On Membrane Pr Structure (Nycomps)
Date :  16 Mar 10  (Deposition) - 12 May 10  (Release) - 12 May 10  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.50
Chains :  Asym. Unit :  A
Biol. Unit 1:  A  (3x)
Keywords :  Anion Channel, Alpha Helical Integral Membrane Protein, Structural Genomics, Psi-2, Protein Structure Initiative, New York Consortium On Membrane Protein Structure, Nycomps, Plant Slac-1 Homolog, Unknown Function (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  Y-H Chen, L. Hu, S. A. Siegelbaum, W. A. Hendrickson
Crystal Structure Of Plant Slac1 Homolog Teha
To Be Published
PubMed: search

(-) Compounds

Molecule 1 - TELLURITE RESISTANCE PROTEIN TEHA HOMOLOG
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PET
    Expression System Strain: BL21(DE3)
    Expression System Taxid: 469008
    Expression System Vector Type: PLASMID
    Gene: HI0511, RD, TEHA
    Organism Scientific: HAEMOPHILUS INFLUENZAE
    Organism Taxid: 727
    Strain: KW20

 Structural Features

(-) Chains, Units

  1
Asymmetric Unit : A
Biological Unit 1 (3x): A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 4)

Asymmetric Unit (1, 4)
No.NameCountTypeFull Name
1BOG4Ligand/IonB-OCTYLGLUCOSIDE
Biological Unit 1 (1, 12)
No.NameCountTypeFull Name
1BOG12Ligand/IonB-OCTYLGLUCOSIDE

(-) Sites  (4, 4)

Asymmetric Unit (4, 4)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREPHE A:34 , ARG A:71 , HIS A:75 , ALA A:271 , THR A:272 , TYR A:275 , SER A:284 , HOH A:375 , HOH A:380BINDING SITE FOR RESIDUE BOG A 315
2AC2SOFTWAREILE A:178 , TYR A:215 , ASP A:224 , THR A:225 , HOH A:358BINDING SITE FOR RESIDUE BOG A 316
3AC3SOFTWARETYR A:74 , ILE A:83 , LEU A:122 , ARG A:123 , GLU A:126 , ARG A:243 , BOG A:318BINDING SITE FOR RESIDUE BOG A 317
4AC4SOFTWAREVAL A:70 , ARG A:71 , TYR A:74 , HIS A:75 , BOG A:317BINDING SITE FOR RESIDUE BOG A 318

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 3M7B)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 3M7B)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 3M7B)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 3M7B)

(-) Exons   (0, 0)

(no "Exon" information available for 3M7B)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:309
 aligned with TEHA_HAEIN | P44741 from UniProtKB/Swiss-Prot  Length:328

    Alignment length:309
                                    28        38        48        58        68        78        88        98       108       118       128       138       148       158       168       178       188       198       208       218       228       238       248       258       268       278       288       298       308       318         
           TEHA_HAEIN    19 KPFPLPTGYFGIPLGLAALSLAWFHLENLFPAARMVSDVLGIVASAVWILFILMYAYKLRYYFEEVRAEYHSPVRFSFIALIPITTMLVGDILYRWNPLIAEVLIWIGTIGQLLFSTLRVSELWQGGVFEQKSTHPSFYLPAVAANFTSASSLALLGYHDLGYLFFGAGMIAWIIFEPVLLQHLRISSLEPQFRATMGIVLAPAFVCVSAYLSINHGEVDTLAKILWGYGFLQLFFLLRLFPWIVEKGLNIGLWAFSFGLASMANSATAFYHGNVLQGVSIFAFVFSNVMIGLLVLMTIYKLTKGQFFL 327
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --C4dic_mal_tran-3m7bA01 A:7-308                                                                                                                                                                                                                                                                                ----- Pfam domains
         Sec.struct. author .....hhhhhhhhhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhh...... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3m7b A   5 KPFPLPTGYFGIPLGLAALSLAWFHLENLFPAARMVSDVLGIVASAVWILFILMYAYKLRYYFEEVRAEYHSPVRFSFIALIPITTMLVGDILYRWNPLIAEVLIWIGTIGQLLFSTLRVSELWQGGVFEQKSTHPSFYLPAVAANFTSASSLALLGYHDLGYLFFGAGMIAWIIFEPVLLQHLRISSLEPQFRATMGIVLAPAFVCVSAYLSINHGEVDTLAKILWGYGFLQLFFLLRLFPWIVEKGLNIGLWAFSFGLASMANSATAFYHGNVLQGVSIFAFVFSNVMIGLLVLMTIYKLTKGQFFL 313
                                    14        24        34        44        54        64        74        84        94       104       114       124       134       144       154       164       174       184       194       204       214       224       234       244       254       264       274       284       294       304
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 3M7B)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 3M7B)

(-) Pfam Domains  (1, 1)

Asymmetric Unit
(-)
Clan: no clan defined [family: C4dic_mal_tran] (10)

(-) Gene Ontology  (8, 8)

Asymmetric Unit(hide GO term definitions)
Chain A   (TEHA_HAEIN | P44741)
biological process
    GO:0006811    ion transport    The directed movement of charged atoms or small charged molecules into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
    GO:0046677    response to antibiotic    Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an antibiotic stimulus. An antibiotic is a chemical substance produced by a microorganism which has the capacity to inhibit the growth of or to kill other microorganisms.
    GO:0046690    response to tellurium ion    Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a tellurium ion stimulus.
    GO:0055085    transmembrane transport    The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other
    GO:0006810    transport    The directed movement of substances (such as macromolecules, small molecules, ions) or cellular components (such as complexes and organelles) into, out of or within a cell, or between cells, or within a multicellular organism by means of some agent such as a transporter, pore or motor protein.
cellular component
    GO:0016021    integral component of membrane    The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.
    GO:0016020    membrane    A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
    GO:0005886    plasma membrane    The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins.

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        TEHA_HAEIN | P44741: 3m71 3m72 3m73 3m74 3m75 3m76 3m77 3m78 3m7c 3m7e 3m7l 4ycr

(-) Related Entries Specified in the PDB File

3m71 CRYSTAL STRUCTURE OF PLANT SLAC1 HOMOLOG TEHA WILD TYPE
3m72 CRYSTAL STRUCTURE OF PLANT SLAC1 HOMOLOG TEHA A208P,G263P
3m73 CRYSTAL STRUCTURE OF PLANT SLAC1 HOMOLOG TEHA F262A
3m74 CRYSTAL STRUCTURE OF PLANT SLAC1 HOMOLOG TEHA F262L
3m75 CRYSTAL STRUCTURE OF PLANT SLAC1 HOMOLOG TEHA F262V
3m76 CRYSTAL STRUCTURE OF PLANT SLAC1 HOMOLOG TEHA G15D
3m77
3m78
3m7c
3m7e
3m7l RELATED ID: GO.357 RELATED DB: TARGETDB