3LW9 - JenaLib

Asymmetric Unit (9, 18)

								dbSNP	PDB
No.	Source	Variant ID	Variant			UniProt ID	Status	ID	Chain	Variant
1	UniProt	VAR_INVA_SALTY_004 *	S	369	N	INVA_SALTY	---	---	A/B	S	369	N
2	UniProt	VAR_INVA_SALTY_005 *	E	381	D	INVA_SALTY	---	---	A/B	E	381	D
3	UniProt	VAR_INVA_SALTY_006 *	E	404	D	INVA_SALTY	---	---	A/B	E	404	D
4	UniProt	VAR_INVA_SALTY_007 *	D	407	S	INVA_SALTY	---	---	A/B	D	407	S
5	UniProt	VAR_INVA_SALTY_008 *	V	412	I	INVA_SALTY	---	---	A/B	V	412	I
6	UniProt	VAR_INVA_SALTY_009 *	V	440	A	INVA_SALTY	---	---	A/B	V	440	A
7	UniProt	VAR_INVA_SALTY_010 *	I	448	T	INVA_SALTY	---	---	A/B	I	448	T
8	UniProt	VAR_INVA_SALTY_011 *	R	475	Q	INVA_SALTY	---	---	A/B	R	475	Q
9	UniProt	VAR_INVA_SALTY_012 *	L	489	V	INVA_SALTY	---	---	A/B	L	489	V
	* ID not provided by source

SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)

Biological Unit 1 (9, 9)

								dbSNP	PDB
No.	Source	Variant ID	Variant			UniProt ID	Status	ID	Chain	Variant
1	UniProt	VAR_INVA_SALTY_004 *	S	369	N	INVA_SALTY	---	---	A	S	369	N
2	UniProt	VAR_INVA_SALTY_005 *	E	381	D	INVA_SALTY	---	---	A	E	381	D
3	UniProt	VAR_INVA_SALTY_006 *	E	404	D	INVA_SALTY	---	---	A	E	404	D
4	UniProt	VAR_INVA_SALTY_007 *	D	407	S	INVA_SALTY	---	---	A	D	407	S
5	UniProt	VAR_INVA_SALTY_008 *	V	412	I	INVA_SALTY	---	---	A	V	412	I
6	UniProt	VAR_INVA_SALTY_009 *	V	440	A	INVA_SALTY	---	---	A	V	440	A
7	UniProt	VAR_INVA_SALTY_010 *	I	448	T	INVA_SALTY	---	---	A	I	448	T
8	UniProt	VAR_INVA_SALTY_011 *	R	475	Q	INVA_SALTY	---	---	A	R	475	Q
9	UniProt	VAR_INVA_SALTY_012 *	L	489	V	INVA_SALTY	---	---	A	L	489	V
	* ID not provided by source

SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)

Biological Unit 2 (9, 9)

								dbSNP	PDB
No.	Source	Variant ID	Variant			UniProt ID	Status	ID	Chain	Variant
1	UniProt	VAR_INVA_SALTY_004 *	S	369	N	INVA_SALTY	---	---	B	S	369	N
2	UniProt	VAR_INVA_SALTY_005 *	E	381	D	INVA_SALTY	---	---	B	E	381	D
3	UniProt	VAR_INVA_SALTY_006 *	E	404	D	INVA_SALTY	---	---	B	E	404	D
4	UniProt	VAR_INVA_SALTY_007 *	D	407	S	INVA_SALTY	---	---	B	D	407	S
5	UniProt	VAR_INVA_SALTY_008 *	V	412	I	INVA_SALTY	---	---	B	V	412	I
6	UniProt	VAR_INVA_SALTY_009 *	V	440	A	INVA_SALTY	---	---	B	V	440	A
7	UniProt	VAR_INVA_SALTY_010 *	I	448	T	INVA_SALTY	---	---	B	I	448	T
8	UniProt	VAR_INVA_SALTY_011 *	R	475	Q	INVA_SALTY	---	---	B	R	475	Q
9	UniProt	VAR_INVA_SALTY_012 *	L	489	V	INVA_SALTY	---	---	B	L	489	V
	* ID not provided by source

SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)

Biological Unit 3 (9, 36)

								dbSNP	PDB
No.	Source	Variant ID	Variant			UniProt ID	Status	ID	Chain	Variant
1	UniProt	VAR_INVA_SALTY_004 *	S	369	N	INVA_SALTY	---	---	A	S	369	N
2	UniProt	VAR_INVA_SALTY_005 *	E	381	D	INVA_SALTY	---	---	A	E	381	D
3	UniProt	VAR_INVA_SALTY_006 *	E	404	D	INVA_SALTY	---	---	A	E	404	D
4	UniProt	VAR_INVA_SALTY_007 *	D	407	S	INVA_SALTY	---	---	A	D	407	S
5	UniProt	VAR_INVA_SALTY_008 *	V	412	I	INVA_SALTY	---	---	A	V	412	I
6	UniProt	VAR_INVA_SALTY_009 *	V	440	A	INVA_SALTY	---	---	A	V	440	A
7	UniProt	VAR_INVA_SALTY_010 *	I	448	T	INVA_SALTY	---	---	A	I	448	T
8	UniProt	VAR_INVA_SALTY_011 *	R	475	Q	INVA_SALTY	---	---	A	R	475	Q
9	UniProt	VAR_INVA_SALTY_012 *	L	489	V	INVA_SALTY	---	---	A	L	489	V
	* ID not provided by source

SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)

Biological Unit 4 (9, 36)

								dbSNP	PDB
No.	Source	Variant ID	Variant			UniProt ID	Status	ID	Chain	Variant
1	UniProt	VAR_INVA_SALTY_004 *	S	369	N	INVA_SALTY	---	---	B	S	369	N
2	UniProt	VAR_INVA_SALTY_005 *	E	381	D	INVA_SALTY	---	---	B	E	381	D
3	UniProt	VAR_INVA_SALTY_006 *	E	404	D	INVA_SALTY	---	---	B	E	404	D
4	UniProt	VAR_INVA_SALTY_007 *	D	407	S	INVA_SALTY	---	---	B	D	407	S
5	UniProt	VAR_INVA_SALTY_008 *	V	412	I	INVA_SALTY	---	---	B	V	412	I
6	UniProt	VAR_INVA_SALTY_009 *	V	440	A	INVA_SALTY	---	---	B	V	440	A
7	UniProt	VAR_INVA_SALTY_010 *	I	448	T	INVA_SALTY	---	---	B	I	448	T
8	UniProt	VAR_INVA_SALTY_011 *	R	475	Q	INVA_SALTY	---	---	B	R	475	Q
9	UniProt	VAR_INVA_SALTY_012 *	L	489	V	INVA_SALTY	---	---	B	L	489	V
	* ID not provided by source

SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)

PROSITE Motifs (0, 0)

Exons (0, 0)

Sequences/Alignments

Asymmetric Unit

Reformat:	Number of residues per line = ('0' or empty: single-line sequence representation)
	Number of residues per labelling interval =
	UniProt sequence: complete aligned part

Show mapping:	SCOP domains	CATH domains	Pfam domains	Secondary structure (by author)
	SAPs(SNPs)	PROSITE motifs	Exons
	(details for a mapped element are shown in a popup box when the mouse pointer rests over it)

Chain A from PDB  Type:PROTEIN  Length:166
 aligned with INVA_SALTY | P0A1I3 from UniProtKB/Swiss-Prot  Length:685

    Alignment length:166
                                   367       377       387       397       407       417       427       437       447       457       467       477       487       497       507       517      
           INVA_SALTY   358 ETVPLILLVPKSRREDLEKAQLAERLRSQFFIDYGVRLPEVLLRDGEGLDDNSIVLLINEIRVEQFTVYFDLMRVVNYSDEVVSFGINPTIHQQGSSQYFWVTHEEGEKLRELGYVLRNALDELYHCLAVTLARNVNEYFGIQETKHMLDQLEAKFPDLLKEVLRH 523
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....eeeee...hhhhhhhhhhhhhhhhhhhhhhh.....eeeee.......eeeeee..eeeeeee.....eee....hhhhhh....eeeee..eeeeeehhhhhhhhhh....eeehhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) -----------N-----------D----------------------D--S----I---------------------------A-------T--------------------------Q-------------V---------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3lw9 A 358 ETVPLILLVPKSRREDLEKAQLAERmRSQFFIDYGVRLPEVLLRDGEGLDDNSIVLLINEIRVEQFTVYFDLmRVVNYSDEVVSFGINPTIHQQGSSQYFWVTHEEGEKLREmGYVLRNALDELYHCLAVTLARNVNEYFGIQETKHmLDQLEAKFPDLLKEVLRH 523
                                   367       377     | 387       397       407       417       427  |    437       447       457       467  |    477       487       497       507       517      
                                                   383-MSE                                        430-MSE                                 470-MSE                            505-MSE

Chain B from PDB  Type:PROTEIN  Length:167
 aligned with INVA_SALTY | P0A1I3 from UniProtKB/Swiss-Prot  Length:685

    Alignment length:167
                                   368       378       388       398       408       418       428       438       448       458       468       478       488       498       508       518       
           INVA_SALTY   359 TVPLILLVPKSRREDLEKAQLAERLRSQFFIDYGVRLPEVLLRDGEGLDDNSIVLLINEIRVEQFTVYFDLMRVVNYSDEVVSFGINPTIHQQGSSQYFWVTHEEGEKLRELGYVLRNALDELYHCLAVTLARNVNEYFGIQETKHMLDQLEAKFPDLLKEVLRHAT 525
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
           Pfam domains (1) FHIPEP-3lw9B01 B:359-525                                                                                                                                                Pfam domains (1)
           Pfam domains (2) FHIPEP-3lw9B02 B:359-525                                                                                                                                                Pfam domains (2)
         Sec.struct. author ...eeeeehhhhhhhhhhhhhhhhhhhhhhhhhh.......eee.......eeeeee..eeeeeee.....eee....hhhhhh....eeee....eeeeehhhhhhhhhh....eeehhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ----------N-----------D----------------------D--S----I---------------------------A-------T--------------------------Q-------------V------------------------------------ SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3lw9 B 359 TVPLILLVPKSRREDLEKAQLAERmRSQFFIDYGVRLPEVLLRDGEGLDDNSIVLLINEIRVEQFTVYFDLmRVVNYSDEVVSFGINPTIHQQGSSQYFWVTHEEGEKLREmGYVLRNALDELYHCLAVTLARNVNEYFGIQETKHmLDQLEAKFPDLLKEVLRHAT 525
                                   368       378    |  388       398       408       418       428 |     438       448       458       468 |     478       488       498      |508       518       
                                                  383-MSE                                        430-MSE                                 470-MSE                            505-MSE

Legend:		→ Mismatch	(orange background)
	-	→ Gap	(green background, '-', border residues have a numbering label)
		→ Modified Residue	(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
	x	→ Chemical Group	(purple background, 'x', labelled with number + name, e.g. ACE or NH2)
	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '\|'

Classification and Annotation

SCOP Domains (0, 0)

CATH Domains (0, 0)

Pfam Domains (1, 2)

Gene Ontology (7, 7)

Asymmetric Unit(hide GO term definitions)

Chain A,B (INVA_SALTY | P0A1I3)

biological process
	GO:0009405	pathogenesis	The set of specific processes that generate the ability of an organism to induce an abnormal, generally detrimental state in another organism.
	GO:0009306	protein secretion	The controlled release of proteins from a cell.
	GO:0015031	protein transport	The directed movement of proteins into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
	GO:0006810	transport	The directed movement of substances (such as macromolecules, small molecules, ions) or cellular components (such as complexes and organelles) into, out of or within a cell, or between cells, or within a multicellular organism by means of some agent such as a transporter, pore or motor protein.
cellular component
	GO:0016021	integral component of membrane	The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.
	GO:0016020	membrane	A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
	GO:0005886	plasma membrane	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins.

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Asymmetric Unit
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Biological Units
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		Biological Unit 4	[ Jena3D ]

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	3lw9
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	INVA_SALTY \| P0A1I3
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Description

Compounds

Structural Features

Chains, Units

Ligands, Modified Residues, Ions (1, 8)

Sites (0, 0)

SS Bonds (0, 0)

Cis Peptide Bonds (0, 0)

Sequence-Structure Mapping

SAPs(SNPs)/Variants (9, 18)